Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.HH3FWD Arachis hypogaea HOM05D000181 ORTHO05D007068 2.1e-21 104.8 53 100.0
arahy.Tifrunner.gnm1.ann1.E7HVGE Arachis hypogaea HOM05D000181 ORTHO05D007068 4.3e-14 80.5 45 88.9
arahy.Tifrunner.gnm1.ann1.HBHB6G Arachis hypogaea HOM05D000181 ORTHO05D007068 6.9e-12 73.2 41 90.2
arahy.Tifrunner.gnm1.ann1.1IB7AW Arachis hypogaea HOM05D000181 ORTHO05D007068 9.0e-12 72.8 39 94.9
arahy.Tifrunner.gnm1.ann1.XZS3QI Arachis hypogaea HOM05D000181 ORTHO05D007068 1.5e-11 72.0 40 90.0
arahy.Tifrunner.gnm1.ann1.KM9BMJ Arachis hypogaea HOM05D000181 ORTHO05D007068 5.8e-11 70.1 45 84.4
Lj3g0011719 Lotus japonicus HOM05D000181 ORTHO05D007068 1.7e-10 68.6 39 89.7
FvH4_3g14760 Fragaria vesca HOM05D000181 ORTHO05D007068 2.2e-10 68.2 39 87.2
FAN11G1148 Fragaria x ananassa HOM05D000181 ORTHO05D007068 2.2e-10 68.2 39 87.2
FAN16G1891 Fragaria x ananassa HOM05D000181 ORTHO05D007068 2.2e-10 68.2 39 87.2
FAN21G2082 Fragaria x ananassa HOM05D000181 ORTHO05D007068 2.2e-10 68.2 39 87.2
Sabra10G0130900 Salix brachista HOM05D000181 ORTHO05D007068 2.2e-10 68.2 39 89.7
COL.COLO4_19750 Corchorus olitorius HOM05D000181 ORTHO05D007068 2.9e-10 67.8 40 85.0
FAN25G2563 Fragaria x ananassa HOM05D000181 ORTHO05D007068 3.8e-10 67.4 39 87.2
CiPaw.11G060800 Carya illinoinensis HOM05D000181 ORTHO05D007068 4.9e-10 67.0 37 89.2
Phvul.011G177500 Phaseolus vulgaris HOM05D000181 ORTHO05D007068 4.9e-10 67.0 39 87.2
QL04p087205 Quercus lobata HOM05D000181 ORTHO05D007068 4.9e-10 67.0 39 87.2
Aqoxy1G01434 Aquilegia oxysepala HOM05D000181 ORTHO05D007068 6.4e-10 66.6 39 84.6
EL10Ac2g03239 Beta vulgaris HOM05D000181 ORTHO05D007068 6.4e-10 66.6 39 84.6
ClCG02G018660 Citrullus lanatus HOM05D000181 ORTHO05D007068 6.4e-10 66.6 39 87.2
MELO3C019635.2 Cucumis melo HOM05D000181 ORTHO05D007068 6.4e-10 66.6 39 87.2
Glyma.08G237500 Glycine max HOM05D000181 ORTHO05D007068 6.4e-10 66.6 39 84.6
MD05G1229800 Malus domestica HOM05D000181 ORTHO05D007068 6.4e-10 66.6 39 87.2
Prupe.4G132700 Prunus persica HOM05D000181 ORTHO05D007068 6.4e-10 66.6 39 87.2
Sed0005173 Sechium edule HOM05D000181 ORTHO05D007068 6.4e-10 66.6 39 87.2
Sc10g0005160 Simmondsia chinensis HOM05D000181 ORTHO05D007068 6.4e-10 66.6 39 84.6
CANSAT80G1988 Cannabis sativa HOM05D000181 ORTHO05D007068 8.4e-10 66.2 39 87.2
Lalb_Chr01g0007221 Lupinus albus HOM05D000181 ORTHO05D007068 8.4e-10 66.2 39 87.2
Thecc.07G182000 Theobroma cacao HOM05D000181 ORTHO05D007068 8.4e-10 66.2 39 87.2
TPR.G9423 Trifolium pratense HOM05D000181 ORTHO05D007068 8.4e-10 66.2 39 84.6
Ca_25910_v3 Cicer arietinum L. HOM05D000181 ORTHO05D007068 1.1e-09 65.9 39 87.2
THA.LOC104812371 Tarenaya hassleriana HOM05D000181 ORTHO05D007068 1.1e-09 65.9 39 84.6
Nitab4.5_0000388g0100 Nicotiana tabacum HOM05D000181 ORTHO05D007068 1.4e-09 65.5 39 82.1
Nitab4.5_0006529g0020 Nicotiana tabacum HOM05D000181 ORTHO05D007068 1.4e-09 65.5 39 82.1
Oeu034062.1 Olea europaea HOM05D000181 ORTHO05D007068 1.4e-09 65.5 39 82.1
Psat4g137600 Pisum sativum HOM05D000181 ORTHO05D007068 1.4e-09 65.5 39 87.2
Potri.010G171300 Populus trichocarpa HOM05D000181 ORTHO05D007068 1.4e-09 65.5 39 87.2
PGR031G2481 Punica granatum HOM05D000181 ORTHO05D007068 1.4e-09 65.5 39 84.6
RcHm_v2.0_Chr5g0024281 Rosa chinensis HOM05D000181 ORTHO05D007068 1.4e-09 65.5 39 84.6
AUR62032086 Chenopodium quinoa HOM05D000181 ORTHO05D007068 1.9e-09 65.1 39 84.6
AUR62040740 Chenopodium quinoa HOM05D000181 ORTHO05D007068 1.9e-09 65.1 39 84.6
Cc00_g28370 Coffea canephora HOM05D000181 ORTHO05D007068 1.9e-09 65.1 39 82.1
Cc00_g28520 Coffea canephora HOM05D000181 ORTHO05D007068 1.9e-09 65.1 39 82.1
Cc04_g12710 Coffea canephora HOM05D000181 ORTHO05D007068 1.9e-09 65.1 39 82.1
CsaV3_6G013510 Cucumis sativus L. HOM05D000181 ORTHO05D007068 1.9e-09 65.1 39 82.1
ECA240G0620 Erigeron canadensis HOM05D000181 ORTHO05D007068 1.9e-09 65.1 39 82.1
Aa31LG4G1430 Aethionema arabicum HOM05D000181 ORTHO05D007068 2.4e-09 64.7 39 84.6
Manes.06G176300 Manihot esculenta HOM05D000181 ORTHO05D007068 2.4e-09 64.7 39 84.6
Medtr8g056860 Medicago truncatula HOM05D000181 ORTHO05D007068 2.4e-09 64.7 39 84.6
AL2G40200 Arabidopsis lyrata HOM05D000181 ORTHO05D007068 3.2e-09 64.3 39 82.1
AT1G79560 Arabidopsis thaliana HOM05D000181 ORTHO05D007068 3.2e-09 64.3 39 82.1
CSS0042976 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D007068 3.2e-09 64.3 39 82.1
Carub.0002s2642 Capsella rubella HOM05D000181 ORTHO05D007068 3.2e-09 64.3 39 82.1
Cc04_g12760 Coffea canephora HOM05D000181 ORTHO05D007068 3.2e-09 64.3 37 83.8
Thhalv10018071m.g Eutrema salsugineum HOM05D000181 ORTHO05D007068 3.2e-09 64.3 39 82.1
Sp5g34620 Schrenkiella parvula HOM05D000181 ORTHO05D007068 3.2e-09 64.3 39 82.1
TWI38G0335 Tripterygium wilfordii HOM05D000181 ORTHO05D007068 3.2e-09 64.3 39 84.6
HanXRQChr03g0078201 Helianthus annuus HOM05D000181 ORTHO05D007068 4.2e-09 63.9 39 82.1
SGA_v2.0_scaffold7G03612 Striga asiatica HOM05D000181 ORTHO05D007068 4.2e-09 63.9 39 76.9
TAR627G0133 Trochodendron aralioides HOM05D000181 ORTHO05D007068 4.2e-09 63.9 39 82.1
GSVIVG01036763001 Vitis vinifera HOM05D000181 ORTHO05D007068 4.2e-09 63.9 39 82.1
Dinv42476 Davidia involucrata HOM05D000181 ORTHO05D007068 5.5e-09 63.5 39 79.5
CARHR073220 Cardamine hirsuta HOM05D000181 ORTHO05D007068 7.1e-09 63.2 39 79.5
AUR62041060 Chenopodium quinoa HOM05D000181 ORTHO05D007068 7.1e-09 63.2 39 79.5
Ciclev10004242m.g Citrus clementina HOM05D000181 ORTHO05D007068 7.1e-09 63.2 39 79.5
Gohir.A13G125100 Gossypium hirsutum HOM05D000181 ORTHO05D007068 7.1e-09 63.2 39 82.1
Gorai.013G144900 Gossypium raimondii HOM05D000181 ORTHO05D007068 7.1e-09 63.2 39 82.1
ATR0752G106 Amborella trichopoda HOM05D000181 ORTHO05D007068 9.3e-09 62.8 39 76.9
Duzib213G0016 Durio zibethinus HOM05D000181 ORTHO05D007068 9.3e-09 62.8 39 79.5
Lj2C14G7 Lonicera japonica HOM05D000181 ORTHO05D007068 9.3e-09 62.8 41 75.6
CAN.G891.3 Capsicum annuum HOM05D000181 ORTHO05D007068 1.2e-08 62.4 39 79.5
Lsat_1_v5_gn_7_69480 Lactuca sativa HOM05D000181 ORTHO05D007068 1.2e-08 62.4 39 79.5
Eucgr.F04462 Eucalyptus grandis HOM05D000181 ORTHO05D007068 1.6e-08 62.0 39 79.5
PSO675G4612 Papaver somniferum HOM05D000181 ORTHO05D007068 1.6e-08 62.0 39 76.9
PSO675G5464 Papaver somniferum HOM05D000181 ORTHO05D007068 1.6e-08 62.0 39 76.9
Solyc02g079000.4 Solanum lycopersicum HOM05D000181 ORTHO05D007068 1.6e-08 62.0 39 76.9
Sopen02g023810 Solanum pennellii HOM05D000181 ORTHO05D007068 1.6e-08 62.0 39 76.9
unitig_748.g7620 Utricularia gibba HOM05D000181 ORTHO05D007068 1.6e-08 62.0 39 74.4
Migut.M01524 Erythranthe guttata HOM05D000181 ORTHO05D007068 2.1e-08 61.6 39 76.9
Gohir.D13G128800 Gossypium hirsutum HOM05D000181 ORTHO05D007068 2.1e-08 61.6 38 81.6
Mapoly0006s0083 Marchantia polymorpha HOM05D000181 ORTHO05D007068 2.1e-08 61.6 39 74.4
Peaxi162Scf00006g01615 Petunia axillaris HOM05D000181 ORTHO05D007068 2.1e-08 61.6 39 76.9
Nn7g38234 Nelumbo nucifera HOM05D000181 ORTHO05D007068 2.7e-08 61.2 39 76.9
MSTRG.7078 Avicennia marina HOM05D000181 ORTHO05D007068 6.0e-08 60.1 39 74.4
Pp3c7_7530 Physcomitrium patens HOM05D000181 ORTHO05D007068 7.9e-08 59.7 39 69.2
AagrBONN_evm.TU.Sc2ySwM_344.4106 Anthoceros agrestis HOM05D000181 ORTHO05D007068 5.1e-07 57.0 39 64.1
C06p29810 Brassica napus HOM05D000181 ORTHO05D007068 5.1e-07 57.0 42 73.8
BolC6t38142H Brassica oleracea HOM05D000181 ORTHO05D007068 5.1e-07 57.0 42 73.8
A07p27070 Brassica napus HOM05D000181 ORTHO05D007068 1.5e-06 55.5 42 71.4
SEGI_07671 Sequoiadendron giganteum HOM05D000181 ORTHO05D007068 2.5e-06 54.7 37 70.3
VMungo1127G1754 Vigna mungo HOM05D000004 ORTHO05D007068 9.6e-06 52.8 59 54.2


User provided reference genes

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