Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.HFW61Q Arachis hypogaea HOM05D006161 ORTHO05D007483 6.1e-36 153.7 81 100.0
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 5.6e-21 104.0 66 84.8
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 5.6e-21 104.0 66 84.8
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 4.0e-19 97.8 66 77.3
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 4.0e-19 97.8 65 80.0
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 8.9e-19 96.7 75 70.7
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 1.2e-18 96.3 73 72.6
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 2.0e-18 95.5 66 75.8
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 2.0e-18 95.5 65 76.9
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 2.6e-18 95.1 77 68.8
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 2.6e-18 95.1 66 77.3
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 2.6e-18 95.1 66 77.3
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 3.4e-18 94.7 66 78.8
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 3.4e-18 94.7 66 75.8
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 3.4e-18 94.7 68 73.5
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 3.4e-18 94.7 68 73.5
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 3.4e-18 94.7 66 74.2
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 4.4e-18 94.4 65 75.4
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 4.4e-18 94.4 65 75.4
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 5.8e-18 94.0 65 76.9
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 5.8e-18 94.0 65 76.9
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 5.8e-18 94.0 66 72.7
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 7.5e-18 93.6 65 75.4
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 7.5e-18 93.6 68 72.1
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 7.5e-18 93.6 68 72.1
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 7.5e-18 93.6 68 72.1
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 7.5e-18 93.6 66 72.7
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 9.8e-18 93.2 66 72.7
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 9.8e-18 93.2 65 73.8
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 9.8e-18 93.2 65 75.4
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 1.3e-17 92.8 66 72.7
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 1.3e-17 92.8 65 75.4
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 1.3e-17 92.8 65 75.4
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 1.3e-17 92.8 65 73.8
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 1.3e-17 92.8 66 74.2
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 1.3e-17 92.8 66 74.2
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 1.3e-17 92.8 66 74.2
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 1.3e-17 92.8 65 75.4
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 1.7e-17 92.4 66 72.7
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.7e-17 92.4 67 73.1
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 1.7e-17 92.4 65 75.4
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 1.7e-17 92.4 65 73.8
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 2.2e-17 92.0 66 74.2
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 2.2e-17 92.0 66 74.2
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 2.2e-17 92.0 65 73.8
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 2.9e-17 91.7 66 77.3
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 3.7e-17 91.3 65 73.8
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 3.7e-17 91.3 65 73.8
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 3.7e-17 91.3 65 73.8
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 3.7e-17 91.3 65 73.8
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 4.9e-17 90.9 66 71.2
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 4.9e-17 90.9 66 71.2
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 4.9e-17 90.9 66 72.7
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 6.4e-17 90.5 64 75.0
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 6.4e-17 90.5 66 75.8
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 8.3e-17 90.1 65 73.8
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 8.3e-17 90.1 65 72.3
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 8.3e-17 90.1 65 73.8
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 8.3e-17 90.1 66 69.7
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 8.3e-17 90.1 65 72.3
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 8.3e-17 90.1 66 74.2
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 1.1e-16 89.7 65 72.3
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 1.1e-16 89.7 66 72.7
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 1.4e-16 89.4 65 72.3
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 1.4e-16 89.4 65 70.8
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 1.4e-16 89.4 66 72.7
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 1.9e-16 89.0 65 72.3
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 1.9e-16 89.0 65 70.8
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 1.9e-16 89.0 65 69.2
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 2.4e-16 88.6 65 72.3
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 2.4e-16 88.6 66 71.2
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 2.4e-16 88.6 65 69.2
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 3.2e-16 88.2 65 70.8
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 5.4e-16 87.4 66 66.7
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 5.4e-16 87.4 65 70.8
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 5.4e-16 87.4 72 65.3
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 5.4e-16 87.4 65 70.8
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 7.0e-16 87.0 78 66.7
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 7.0e-16 87.0 65 70.8
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 7.0e-16 87.0 65 70.8
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 9.2e-16 86.7 65 70.8
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 9.2e-16 86.7 67 67.2
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 1.2e-15 86.3 66 68.2
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.2e-15 86.3 66 66.7
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 1.2e-15 86.3 66 68.2
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 2.7e-15 85.1 66 69.7
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 3.5e-15 84.7 66 68.2
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 7.8e-15 83.6 66 68.2
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 1.3e-14 82.8 66 68.2
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 1.7e-14 82.4 66 66.7
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 1.7e-14 82.4 67 61.2
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 2.3e-14 82.0 66 65.2
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 2.3e-14 82.0 66 65.2
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 4.7e-12 74.3 66 63.6
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 1.1e-11 73.2 67 53.7
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 6.8e-11 70.5 64 53.1
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 2.6e-10 68.6 65 60.0
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 7.5e-10 67.0 66 50.0
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 8.3e-09 63.5 105 41.0
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.4e-08 62.8 45 64.4
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 1.6e-07 59.3 65 55.4


User provided reference genes

Program Settings