Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.HDLM7U Arachis hypogaea HOM05D005359 ORTHO05D006431 7.2e-36 153.3 73 100.0
arahy.Tifrunner.gnm1.ann1.X0Q2J1 Arachis hypogaea HOM05D005359 ORTHO05D006431 7.2e-36 153.3 73 100.0
arahy.Tifrunner.gnm1.ann1.F717DE Arachis hypogaea HOM05D005359 ORTHO05D006431 2.7e-35 151.4 73 98.6
arahy.Tifrunner.gnm1.ann1.BYQ4G2 Arachis hypogaea HOM05D005359 ORTHO05D006431 1.8e-34 148.7 73 97.3
arahy.Tifrunner.gnm1.ann1.B308TG Arachis hypogaea HOM05D005359 ORTHO05D006431 5.2e-34 147.1 73 97.3
arahy.Tifrunner.gnm1.ann1.8TZ9EP Arachis hypogaea HOM05D005359 ORTHO05D006431 2.6e-33 144.8 71 97.2
arahy.Tifrunner.gnm1.ann1.HK0KDN Arachis hypogaea HOM05D005359 ORTHO05D006431 7.5e-33 143.3 71 95.8
arahy.Tifrunner.gnm1.ann1.94J17Q Arachis hypogaea HOM05D005359 ORTHO05D006431 1.7e-32 142.1 73 94.5
arahy.Tifrunner.gnm1.ann1.E0G9L5 Arachis hypogaea HOM05D005359 ORTHO05D006431 1.7e-32 142.1 73 94.5
Lj4g0002358 Lotus japonicus HOM05D005359 ORTHO05D006431 3.5e-30 134.4 71 87.3
Lj6g0011599 Lotus japonicus HOM05D005359 ORTHO05D006431 4.5e-30 134.0 70 88.6
Medtr2g007220 Medicago truncatula HOM05D005359 ORTHO05D006431 7.7e-30 133.3 71 85.9
Glyma.15G046900 Glycine max HOM05D005359 ORTHO05D006431 1.3e-29 132.5 71 83.1
VMungo0540G0616 Vigna mungo HOM05D005359 ORTHO05D006431 3.8e-29 131.0 71 84.5
Ca_00078_v3 Cicer arietinum L. HOM05D005359 ORTHO05D006431 1.5e-28 129.0 71 83.1
VMungo0251G3193 Vigna mungo HOM05D005359 ORTHO05D006431 1.5e-28 129.0 71 81.7
Phvul.006G214300 Phaseolus vulgaris HOM05D005359 ORTHO05D006431 1.9e-28 128.6 71 83.1
TPR.G2126 Trifolium pratense HOM05D005359 ORTHO05D006431 3.2e-28 127.9 71 80.3
Phvul.002G250300 Phaseolus vulgaris HOM05D005359 ORTHO05D006431 4.2e-28 127.5 71 80.3
Glyma.08G127900 Glycine max HOM05D005359 ORTHO05D006431 1.2e-27 125.9 71 78.9
CANSAT11G0924 Cannabis sativa HOM05D005359 ORTHO05D006431 1.6e-27 125.6 71 81.7
Glyma.05G169600 Glycine max HOM05D005359 ORTHO05D006431 1.6e-27 125.6 71 77.5
Psat2g122240 Pisum sativum HOM05D005359 ORTHO05D006431 2.1e-27 125.2 71 80.3
THA.LOC104819321 Tarenaya hassleriana HOM05D005359 ORTHO05D006431 2.7e-27 124.8 71 78.9
CSS0002632 Camellia sinensis var. sinensis HOM05D005359 ORTHO05D006431 4.7e-27 124.0 71 83.1
CSS0043414 Camellia sinensis var. sinensis HOM05D005359 ORTHO05D006431 4.7e-27 124.0 71 83.1
CANSAT11G2649 Cannabis sativa HOM05D005359 ORTHO05D006431 4.7e-27 124.0 71 80.3
CiPaw.06G147600 Carya illinoinensis HOM05D005359 ORTHO05D006431 4.7e-27 124.0 71 80.3
Glyma.08G185900 Glycine max HOM05D005359 ORTHO05D006431 4.7e-27 124.0 71 78.9
Manes.07G015400 Manihot esculenta HOM05D005359 ORTHO05D006431 4.7e-27 124.0 71 80.3
QL08p043348 Quercus lobata HOM05D005359 ORTHO05D006431 1.4e-26 122.5 71 80.3
Aa31LG1G4050 Aethionema arabicum HOM05D005359 ORTHO05D006431 1.8e-26 122.1 71 77.5
Eucgr.I02722 Eucalyptus grandis HOM05D005359 ORTHO05D006431 2.3e-26 121.7 71 77.5
Cpa.g.sc113.63 Carica papaya HOM05D005359 ORTHO05D006431 3.0e-26 121.3 71 78.9
Potri.003G019400 Populus trichocarpa HOM05D005359 ORTHO05D006431 3.0e-26 121.3 71 78.9
Lalb_Chr07g0185731 Lupinus albus HOM05D005359 ORTHO05D006431 4.0e-26 120.9 70 78.6
Rhsim11G0129700 Rhododendron simsii HOM05D005359 ORTHO05D006431 4.0e-26 120.9 71 78.9
Sabra03G0010900 Salix brachista HOM05D005359 ORTHO05D006431 4.0e-26 120.9 71 78.9
COL.COLO4_17869 Corchorus olitorius HOM05D005359 ORTHO05D006431 6.8e-26 120.2 71 77.5
Thecc.02G038700 Theobroma cacao HOM05D005359 ORTHO05D006431 6.8e-26 120.2 71 77.5
Cfa005525 Carpinus fangiana HOM05D005359 ORTHO05D006431 8.8e-26 119.8 70 80.0
GSVIVG01022967001 Vitis vinifera HOM05D005359 ORTHO05D006431 8.8e-26 119.8 71 78.9
CiPaw.05G044000 Carya illinoinensis HOM05D005359 ORTHO05D006431 2.0e-25 118.6 71 76.1
Lalb_Chr20g0123431 Lupinus albus HOM05D005359 ORTHO05D006431 2.0e-25 118.6 70 80.0
TWI14G1253 Tripterygium wilfordii HOM05D005359 ORTHO05D006431 2.0e-25 118.6 71 74.6
Hma1.2p1_0217F.1_g092010 Hydrangea macrophylla HOM05D005359 ORTHO05D006431 2.6e-25 118.2 71 77.5
Potri.001G210800 Populus trichocarpa HOM05D005359 ORTHO05D006431 2.6e-25 118.2 71 77.5
Prupe.1G568000 Prunus persica HOM05D005359 ORTHO05D006431 2.6e-25 118.2 71 76.1
Sabra01G0162800 Salix brachista HOM05D005359 ORTHO05D006431 2.6e-25 118.2 71 74.6
Atru.chr6.646 Acer truncatum HOM05D005359 ORTHO05D006431 3.4e-25 117.9 71 73.2
EL10Ac6g14556 Beta vulgaris HOM05D005359 ORTHO05D006431 4.4e-25 117.5 71 77.5
Haze_01666 Corylus avellana HOM05D005359 ORTHO05D006431 4.4e-25 117.5 70 77.1
Duzib052G1228 Durio zibethinus HOM05D005359 ORTHO05D006431 4.4e-25 117.5 71 76.1
Gohir.A01G178400 Gossypium hirsutum HOM05D005359 ORTHO05D006431 4.4e-25 117.5 71 76.1
Gohir.A12G031900 Gossypium hirsutum HOM05D005359 ORTHO05D006431 4.4e-25 117.5 71 76.1
Gohir.D01G169300 Gossypium hirsutum HOM05D005359 ORTHO05D006431 4.4e-25 117.5 71 76.1
Gohir.D12G040400 Gossypium hirsutum HOM05D005359 ORTHO05D006431 4.4e-25 117.5 71 76.1
Gorai.002G210900 Gossypium raimondii HOM05D005359 ORTHO05D006431 4.4e-25 117.5 71 76.1
Gorai.008G042100 Gossypium raimondii HOM05D005359 ORTHO05D006431 4.4e-25 117.5 71 76.1
Lj5A252T45 Lonicera japonica HOM05D005359 ORTHO05D006431 4.4e-25 117.5 72 75.0
Dinv19364 Davidia involucrata HOM05D005359 ORTHO05D006431 5.7e-25 117.1 71 77.5
Dinv24279 Davidia involucrata HOM05D005359 ORTHO05D006431 5.7e-25 117.1 71 78.9
vmacro01763 Vaccinium macrocarpon HOM05D005359 ORTHO05D006431 5.7e-25 117.1 71 77.5
PGR042G0198 Punica granatum HOM05D005359 ORTHO05D006431 7.5e-25 116.7 71 74.6
Hund05788 Selenicereus undatus HOM05D005359 ORTHO05D006431 7.5e-25 116.7 71 77.5
TWI23G0911 Tripterygium wilfordii HOM05D005359 ORTHO05D006431 7.5e-25 116.7 71 74.6
Ciclev10001293m.g Citrus clementina HOM05D005359 ORTHO05D006431 1.3e-24 115.9 71 74.6
MD08G1228700 Malus domestica HOM05D005359 ORTHO05D006431 1.3e-24 115.9 71 74.6
Peaxi162Scf00011g00352 Petunia axillaris HOM05D005359 ORTHO05D006431 1.3e-24 115.9 70 77.1
HanXRQChr16g0514561 Helianthus annuus HOM05D005359 ORTHO05D006431 2.2e-24 115.2 70 77.1
Sed0010360 Sechium edule HOM05D005359 ORTHO05D006431 2.2e-24 115.2 71 76.1
HanXRQChr10g0289981 Helianthus annuus HOM05D005359 ORTHO05D006431 3.7e-24 114.4 70 77.1
Oeu008891.1 Olea europaea HOM05D005359 ORTHO05D006431 4.9e-24 114.0 70 75.7
MD15G1422700 Malus domestica HOM05D005359 ORTHO05D006431 8.3e-24 113.2 71 74.6
ECA234G2063 Erigeron canadensis HOM05D005359 ORTHO05D006431 1.1e-23 112.8 70 75.7
DCAR_013987 Daucus carota HOM05D005359 ORTHO05D006431 1.4e-23 112.5 71 73.2
HanXRQChr06g0169581 Helianthus annuus HOM05D005359 ORTHO05D006431 1.4e-23 112.5 69 73.9
THA.LOC104809588 Tarenaya hassleriana HOM05D005359 ORTHO05D006431 4.1e-23 110.9 71 71.8
AUR62002965 Chenopodium quinoa HOM05D005359 ORTHO05D006431 5.4e-23 110.5 71 73.2
AUR62007773 Chenopodium quinoa HOM05D005359 ORTHO05D006431 5.4e-23 110.5 71 73.2
ECA236G4790 Erigeron canadensis HOM05D005359 ORTHO05D006431 5.4e-23 110.5 70 71.4
SGA_v2.0_scaffold292G47368 Striga asiatica HOM05D005359 ORTHO05D006431 5.4e-23 110.5 68 75.0
Cc02_g22460 Coffea canephora HOM05D005359 ORTHO05D006431 7.0e-23 110.2 69 73.9
CsaV3_6G037270 Cucumis sativus L. HOM05D005359 ORTHO05D006431 7.0e-23 110.2 71 69.0
SalBow6G6401 Salvia bowleyana HOM05D005359 ORTHO05D006431 7.0e-23 110.2 70 71.4
PGSC0003DMG400023758 Solanum tuberosum HOM05D005359 ORTHO05D006431 7.0e-23 110.2 70 75.7
Lsat_1_v5_gn_5_109981 Lactuca sativa HOM05D005359 ORTHO05D006431 9.1e-23 109.8 71 76.1
Nitab4.5_0007420g0030 Nicotiana tabacum HOM05D005359 ORTHO05D006431 9.1e-23 109.8 68 75.0
Solyc01g104230.4 Solanum lycopersicum HOM05D005359 ORTHO05D006431 9.1e-23 109.8 70 75.7
Sopen01g046670 Solanum pennellii HOM05D005359 ORTHO05D006431 9.1e-23 109.8 70 75.7
AL1G21710 Arabidopsis lyrata HOM05D005359 ORTHO05D006431 1.2e-22 109.4 70 74.3
AT1G10780 Arabidopsis thaliana HOM05D005359 ORTHO05D006431 1.2e-22 109.4 70 74.3
MSTRG.5231 Avicennia marina HOM05D005359 ORTHO05D006431 1.2e-22 109.4 70 71.4
ClCG09G014240 Citrullus lanatus HOM05D005359 ORTHO05D006431 1.2e-22 109.4 71 70.4
Nn5g28206 Nelumbo nucifera HOM05D005359 ORTHO05D006431 1.2e-22 109.4 69 71.0
CAN.G1577.14 Capsicum annuum HOM05D005359 ORTHO05D006431 1.6e-22 109.0 70 74.3
MELO3C014388.2 Cucumis melo HOM05D005359 ORTHO05D006431 1.6e-22 109.0 71 69.0
Thecc.02G038500 Theobroma cacao HOM05D005359 ORTHO05D006431 1.6e-22 109.0 70 70.0
Sc16g0001650 Simmondsia chinensis HOM05D005359 ORTHO05D006431 2.0e-22 108.6 71 73.2
RcHm_v2.0_Chr7g0222501 Rosa chinensis HOM05D005359 ORTHO05D006431 2.7e-22 108.2 70 71.4
Migut.N01041 Erythranthe guttata HOM05D005359 ORTHO05D006431 7.7e-22 106.7 70 70.0
Thhalv10007703m.g Eutrema salsugineum HOM05D005359 ORTHO05D006431 7.7e-22 106.7 71 74.6
FvH4_5g29550 Fragaria vesca HOM05D005359 ORTHO05D006431 7.7e-22 106.7 70 70.0
FAN08G1144 Fragaria x ananassa HOM05D005359 ORTHO05D006431 7.7e-22 106.7 70 70.0
FAN13G1157 Fragaria x ananassa HOM05D005359 ORTHO05D006431 7.7e-22 106.7 70 70.0
FAN18G3183 Fragaria x ananassa HOM05D005359 ORTHO05D006431 7.7e-22 106.7 70 70.0
Sed0018525 Sechium edule HOM05D005359 ORTHO05D006431 7.7e-22 106.7 71 66.2
unitig_26.g9020 Utricularia gibba HOM05D005359 ORTHO05D006431 1.3e-21 105.9 71 70.4
DCAR_031890 Daucus carota HOM05D005359 ORTHO05D006431 1.7e-21 105.5 71 70.4
Nitab4.5_0002245g0060 Nicotiana tabacum HOM05D005359 ORTHO05D006431 1.7e-21 105.5 68 72.1
Sp1g09480 Schrenkiella parvula HOM05D005359 ORTHO05D006431 2.9e-21 104.8 71 70.4
Carub.0001s1033 Capsella rubella HOM05D005359 ORTHO05D006431 3.8e-21 104.4 70 70.0
TAR376G0200 Trochodendron aralioides HOM05D005359 ORTHO05D006431 5.0e-21 104.0 69 68.1
Zm00001eb037840 Zea mays HOM05D005359 ORTHO05D006431 6.6e-21 103.6 70 68.6
ATR0193G009 Amborella trichopoda HOM05D005359 ORTHO05D006431 1.1e-20 102.8 68 66.2
TAR628G1654 Trochodendron aralioides HOM05D005359 ORTHO05D006431 1.5e-20 102.4 69 68.1
A09p64680 Brassica napus HOM05D005359 ORTHO05D006431 3.3e-20 101.3 71 69.0
C08p48500 Brassica napus HOM05D005359 ORTHO05D006431 3.3e-20 101.3 71 69.0
BolC8t52390H Brassica oleracea HOM05D005359 ORTHO05D006431 3.3e-20 101.3 71 69.0
BraA09t41824Z Brassica rapa HOM05D005359 ORTHO05D006431 3.3e-20 101.3 71 69.0
CARHR011000 Cardamine hirsuta HOM05D005359 ORTHO05D006431 3.3e-20 101.3 70 68.6
Os09g0454300 Oryza sativa ssp. japonica HOM05D005359 ORTHO05D006431 4.2e-20 100.9 70 64.3
Zm00001eb100430 Zea mays HOM05D005359 ORTHO05D006431 7.2e-20 100.1 70 62.9
Aqoxy5G02275 Aquilegia oxysepala HOM05D005359 ORTHO05D006431 9.5e-20 99.8 68 67.6
Zm00001eb176520 Zea mays HOM05D005359 ORTHO05D006431 1.2e-19 99.4 70 64.3
Lsat_1_v5_gn_4_48740 Lactuca sativa HOM05D005359 ORTHO05D006431 2.1e-19 98.6 71 67.6
MBI06_g20718_MAGBIO Magnolia biondii HOM05D005359 ORTHO05D006431 2.3e-18 95.1 69 62.3
Ah.03g138120 Amaranthus hybridus HOM05D005359 ORTHO05D006431 1.2e-17 92.8 55 78.2
Os08g0469500 Oryza sativa ssp. japonica HOM05D005359 ORTHO05D006431 1.5e-17 92.4 70 61.4
Mapoly0113s0005 Marchantia polymorpha HOM05D005359 ORTHO05D006431 3.2e-15 84.7 69 56.5
AagrBONN_evm.TU.Sc2ySwM_117.2184 Anthoceros agrestis HOM05D005359 ORTHO05D006431 4.1e-15 84.3 69 55.1
arahy.Tifrunner.gnm1.ann1.3FYK03 Arachis hypogaea HOM05D005359 ORTHO05D006431 5.4e-15 84.0 38 100.0
SMO169G0280 Selaginella moellendorffii HOM05D005359 ORTHO05D006431 2.7e-14 81.6 71 52.1
HPP92_010977 Vanilla planifolia HOM05D005359 ORTHO05D006431 5.4e-07 57.4 53 52.8
Oeu033126.1 Olea europaea HOM05D005359 ORTHO05D006431 3.5e-06 54.7 29 82.8
BcaC05g24954 Brassica carinata HOM05D005359 ORTHO05D006431 6.0e-06 53.9 57 47.4


User provided reference genes

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