Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 9.0e-198 693.3 338 100.0
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 9.0e-198 693.3 338 100.0
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 2.7e-146 522.3 334 78.1
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 3.1e-142 508.8 328 77.7
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 2.0e-141 506.1 334 74.6
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 4.5e-141 505.0 337 73.3
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 5.0e-140 501.5 341 74.5
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 5.0e-140 501.5 338 72.5
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 1.1e-139 500.4 332 74.7
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 4.4e-136 488.4 338 71.0
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 2.0e-133 479.6 307 73.9
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 2.0e-133 479.6 332 69.0
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 3.5e-133 478.8 337 69.7
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 1.3e-132 476.9 326 72.1
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 1.7e-132 476.5 336 70.5
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 3.8e-132 475.3 308 73.7
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 7.2e-131 471.1 343 68.2
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 3.6e-130 468.8 325 69.8
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 4.7e-130 468.4 307 73.0
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 4.7e-130 468.4 325 69.8
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 8.0e-130 467.6 335 67.2
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 1.0e-129 467.2 325 69.8
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 4.0e-129 465.3 297 73.7
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 5.2e-129 464.9 286 77.3
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 6.8e-129 464.5 324 68.8
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 1.2e-128 463.8 299 71.6
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 1.5e-128 463.4 309 70.2
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 2.6e-128 462.6 287 74.6
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 3.4e-128 462.2 287 77.0
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 3.4e-128 462.2 293 74.1
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 4.4e-128 461.8 317 69.7
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 7.5e-128 461.1 305 71.5
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 7.5e-128 461.1 297 72.7
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 7.5e-128 461.1 307 72.0
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 3.7e-127 458.8 315 72.1
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 6.3e-127 458.0 298 72.8
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 8.3e-127 457.6 339 67.0
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 8.3e-127 457.6 330 67.0
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 1.1e-126 457.2 285 74.4
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 1.1e-126 457.2 320 69.4
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 1.4e-126 456.8 336 67.9
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.4e-126 456.1 339 66.7
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 5.4e-126 454.9 297 71.4
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 5.4e-126 454.9 291 74.2
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 2.0e-125 453.0 334 64.7
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 2.0e-125 453.0 282 73.8
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.0e-125 453.0 320 69.1
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 4.5e-125 451.8 321 69.8
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 5.9e-125 451.4 279 74.2
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 5.9e-125 451.4 294 69.7
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 7.7e-125 451.1 297 70.4
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 7.7e-125 451.1 295 71.2
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 1.0e-124 450.7 297 69.7
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 1.0e-124 450.7 317 67.2
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 1.0e-124 450.7 285 73.0
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 1.3e-124 450.3 302 71.2
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 1.3e-124 450.3 330 66.4
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 1.7e-124 449.9 282 73.0
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 1.7e-124 449.9 344 64.0
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 5.0e-124 448.4 297 69.7
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 8.6e-124 447.6 297 69.7
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 1.5e-123 446.8 297 69.7
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 1.5e-123 446.8 329 68.7
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 3.3e-123 445.7 298 70.1
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 4.3e-123 445.3 341 63.9
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 4.3e-123 445.3 297 69.7
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 5.6e-123 444.9 280 75.4
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 7.3e-123 444.5 298 69.5
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 9.5e-123 444.1 298 69.8
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 9.5e-123 444.1 298 70.1
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 1.2e-122 443.7 298 69.8
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 2.8e-122 442.6 355 62.5
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 3.6e-122 442.2 318 68.2
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 1.0e-121 440.7 297 69.4
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 1.5e-120 436.8 266 76.7
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 1.3e-119 433.7 314 66.2
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 4.9e-119 431.8 301 69.1
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 4.9e-119 431.8 326 64.1
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 5.4e-118 428.3 281 68.7
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 3.5e-117 425.6 321 66.4
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 5.9e-117 424.9 242 83.1
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 7.3e-115 417.9 301 67.1
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 4.0e-113 412.1 279 67.0
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 3.7e-111 405.6 304 62.8
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 4.9e-111 405.2 244 75.8
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 1.6e-109 400.2 268 71.6
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 1.7e-108 396.7 242 76.9
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 3.3e-107 392.5 285 66.3
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 2.1e-106 389.8 241 72.6
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 5.2e-105 385.2 307 59.3
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 8.3e-103 377.9 297 58.6
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 5.1e-100 368.6 338 56.5
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 1.9e-99 366.7 284 59.9
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 3.3e-99 365.9 312 59.3
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 1.3e-92 344.0 278 56.8
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 2.9e-87 326.2 209 73.7
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 7.9e-77 291.6 194 69.1
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 3.5e-69 266.2 293 47.8
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 3.2e-62 243.0 162 71.0
Cpa.g.sc99.56 Carica papaya HOM05D006978 ORTHO05D008723 5.0e-55 219.2 140 73.6
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 1.2e-53 214.5 115 81.7
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.0e-47 194.9 109 77.1
arahy.Tifrunner.gnm1.ann1.5L80US Arachis hypogaea HOM05D006978 ORTHO05D008723 5.1e-44 182.6 92 97.8
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 1.5e-43 181.0 151 58.9
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 3.1e-41 173.3 105 76.2
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 1.2e-40 171.4 279 38.0
MBI11_g38269_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.4e-33 147.9 107 65.4
Actinidia34017 Actinidia chinensis HOM05D006978 ORTHO05D008723 8.5e-31 138.7 156 48.7
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 1.7e-26 124.4 109 57.8
arahy.Tifrunner.gnm1.ann1.0RBU3Z Arachis hypogaea HOM05D006978 ORTHO05D008723 2.7e-21 107.1 55 92.7
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 3.6e-21 106.7 141 42.6
MBI11_g31938_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 2.2e-10 70.9 45 71.1
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 7.0e-09 65.9 60 56.7
MBI11_g31937_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 9.2e-09 65.5 42 69.0


User provided reference genes

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