Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.HAWP0L Arachis hypogaea HOM05D019977 ORTHO05D005065 8.6e-128 460.3 228 100.0
arahy.Tifrunner.gnm1.ann1.U9BU7H Arachis hypogaea HOM05D004053 ORTHO05D005065 6.5e-59 231.5 131 86.3
arahy.Tifrunner.gnm1.ann1.F0KDF8 Arachis hypogaea HOM05D004053 ORTHO05D005065 6.3e-38 161.8 127 68.5
arahy.Tifrunner.gnm1.ann1.59R5K9 Arachis hypogaea HOM05D004053 ORTHO05D005065 3.3e-26 122.9 68 88.2
Lalb_Chr21g0306591 Lupinus albus HOM05D004053 ORTHO05D005065 7.3e-26 121.7 170 42.9
arahy.Tifrunner.gnm1.ann1.V8R19R Arachis hypogaea HOM05D004053 ORTHO05D005065 1.8e-24 117.1 186 38.7
Ca_10403_v3 Cicer arietinum L. HOM05D004053 ORTHO05D005065 5.2e-24 115.5 201 38.3
Glyma.19G153300 Glycine max HOM05D004053 ORTHO05D005065 5.2e-24 115.5 190 38.4
Psat6g168840 Pisum sativum HOM05D004053 ORTHO05D005065 3.4e-23 112.8 170 42.4
arahy.Tifrunner.gnm1.ann1.K8THJN Arachis hypogaea HOM05D004053 ORTHO05D005065 5.8e-23 112.1 193 37.8
Lalb_Chr06g0163121 Lupinus albus HOM05D004053 ORTHO05D005065 6.4e-22 108.6 192 37.0
Medtr1g089980 Medicago truncatula HOM05D004053 ORTHO05D005065 6.4e-22 108.6 176 40.9
TPR.G13395 Trifolium pratense HOM05D004053 ORTHO05D005065 6.4e-22 108.6 176 39.8
Glyma.03G150700 Glycine max HOM05D004053 ORTHO05D005065 1.4e-21 107.5 190 37.4
Glyma.02G149700 Glycine max HOM05D004053 ORTHO05D005065 2.0e-20 103.6 185 38.4
Lj5g0001920 Lotus japonicus HOM05D004053 ORTHO05D005065 3.5e-20 102.8 170 40.6
Glyma.10G024200 Glycine max HOM05D004053 ORTHO05D005065 7.8e-20 101.7 185 37.3
Lj1g0006875 Lotus japonicus HOM05D004053 ORTHO05D005065 3.0e-19 99.8 192 33.3
VMungo0720G1290 Vigna mungo HOM05D004053 ORTHO05D005065 7.3e-18 95.1 195 33.3
Phvul.007G169200 Phaseolus vulgaris HOM05D004053 ORTHO05D005065 9.5e-18 94.7 165 37.0
VMungo1383G0556 Vigna mungo HOM05D004053 ORTHO05D005065 1.6e-17 94.0 170 34.1
Phvul.001G148300 Phaseolus vulgaris HOM05D004053 ORTHO05D005065 2.1e-17 93.6 170 35.3
Ca_08561_v3 Cicer arietinum L. HOM05D004053 ORTHO05D005065 8.1e-17 91.7 203 32.5
Ca_08595_v3 Cicer arietinum L. HOM05D004053 ORTHO05D005065 8.1e-17 91.7 203 32.5
Psat3g065760 Pisum sativum HOM05D004053 ORTHO05D005065 5.2e-16 89.0 210 29.5
TPR.G32826 Trifolium pratense HOM05D004053 ORTHO05D005065 1.5e-15 87.4 182 33.0
Medtr7g094470 Medicago truncatula HOM05D004053 ORTHO05D005065 6.4e-14 82.0 182 32.4
Potri.002G215800 Populus trichocarpa HOM05D004053 ORTHO05D005065 3.0e-11 73.2 185 31.9
Cpa.g.sc9.119 Carica papaya HOM05D004053 ORTHO05D005065 6.6e-11 72.0 189 32.3
TAR362G1031 Trochodendron aralioides HOM05D004053 ORTHO05D005065 6.6e-11 72.0 188 30.3
Dinv11260 Davidia involucrata HOM05D004053 ORTHO05D005065 1.5e-10 70.9 182 31.9
QL12p022856 Quercus lobata HOM05D004053 ORTHO05D005065 2.5e-10 70.1 198 31.3
Atru.chr5.1352 Acer truncatum HOM05D004053 ORTHO05D005065 3.3e-10 69.7 179 30.2
Potri.014G138200 Populus trichocarpa HOM05D004053 ORTHO05D005065 4.3e-10 69.3 177 31.6
Ciclev10020315m.g Citrus clementina HOM05D004053 ORTHO05D005065 1.2e-09 67.8 187 31.0
Manes.01G210500 Manihot esculenta HOM05D004053 ORTHO05D005065 1.2e-09 67.8 177 32.2
arahy.Tifrunner.gnm1.ann1.NNX6TU Arachis hypogaea HOM05D019977 ORTHO05D086120 1.6e-09 67.4 39 79.5
arahy.Tifrunner.gnm1.ann1.SSU5GD Arachis hypogaea HOM05D019977 ORTHO05D082232 1.6e-09 67.4 39 79.5
arahy.Tifrunner.gnm1.ann1.7R1Z85 Arachis hypogaea HOM05D019977 ORTHO05D084385 2.8e-09 66.6 39 79.5
PGR044G2575 Punica granatum HOM05D004053 ORTHO05D005065 2.8e-09 66.6 144 33.3
Haze_04757 Corylus avellana HOM05D004053 ORTHO05D005065 2.3e-08 63.5 169 31.4
Lsat_1_v5_gn_5_187500 Lactuca sativa HOM05D004053 ORTHO05D005065 2.3e-08 63.5 138 31.2
Nn1g02136 Nelumbo nucifera HOM05D004053 ORTHO05D005065 2.3e-08 63.5 196 28.1
arahy.Tifrunner.gnm1.ann1.KPPZ9K Arachis hypogaea HOM05D019977 ORTHO05D082295 3.1e-08 63.2 39 74.4
arahy.Tifrunner.gnm1.ann1.TYM3TI Arachis hypogaea HOM05D019977 ORTHO05D087093 3.1e-08 63.2 38 78.9
CSS0023044 Camellia sinensis var. sinensis HOM05D004053 ORTHO05D005065 3.1e-08 63.2 190 26.3
CiPaw.07G095100 Carya illinoinensis HOM05D004053 ORTHO05D005065 5.2e-08 62.4 170 28.8
VMungo0540G1158 Vigna mungo HOM05D004053 ORTHO05D005065 5.2e-08 62.4 60 55.0
Psat1g163200 Pisum sativum HOM05D000871 ORTHO05D008698 6.8e-08 62.0 71 49.3
Hma1.2p1_0257F.1_g103830 Hydrangea macrophylla HOM05D004053 ORTHO05D005065 8.9e-08 61.6 201 27.9
Cfa006097 Carpinus fangiana HOM05D004053 ORTHO05D005065 3.4e-07 59.7 141 32.6
Sabra14G0104300 Salix brachista HOM05D004053 ORTHO05D005065 7.6e-07 58.5 177 28.8
GSVIVG01011074001 Vitis vinifera HOM05D004053 ORTHO05D005065 7.6e-07 58.5 46 58.7
Prupe.8G245900 Prunus persica HOM05D004053 ORTHO05D005065 9.9e-07 58.2 170 31.8
Glyma.05G088550 Glycine max HOM05D004053 ORTHO05D005065 1.3e-06 57.8 83 37.3
Aqoxy2G03230 Aquilegia oxysepala HOM05D004053 ORTHO05D005065 2.2e-06 57.0 193 27.5
Duzib133G0805 Durio zibethinus HOM05D004053 ORTHO05D005065 2.2e-06 57.0 177 28.8
MBI17_g34956_MAGBIO Magnolia biondii HOM05D004053 ORTHO05D005065 2.2e-06 57.0 198 26.3
HanXRQChr01g0002441 Helianthus annuus HOM05D004053 ORTHO05D005065 3.7e-06 56.2 131 28.2
CANSAT25G0924 Cannabis sativa HOM05D004053 ORTHO05D005065 4.9e-06 55.8 69 50.7
PSO832G4321 Papaver somniferum HOM05D004053 ORTHO05D005065 4.9e-06 55.8 46 54.3
CiPaw.08G102900 Carya illinoinensis HOM05D004053 ORTHO05D005065 6.4e-06 55.5 48 54.2
Lj1C43T4 Lonicera japonica HOM05D004053 ORTHO05D005065 8.4e-06 55.1 105 31.4
Nn4g26160 Nelumbo nucifera HOM05D004053 ORTHO05D005065 8.4e-06 55.1 46 58.7


User provided reference genes

Program Settings