Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 1.5e-189 666.0 327 100.0
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 7.1e-176 620.5 318 97.2
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 3.1e-86 322.8 263 66.2
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 2.7e-82 309.7 261 65.5
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 3.5e-82 309.3 259 63.3
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 3.5e-82 309.3 263 65.8
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 1.0e-81 307.8 258 62.8
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 3.9e-81 305.8 258 62.0
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 1.5e-80 303.9 259 64.5
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 3.6e-79 299.3 268 62.3
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 5.3e-78 295.4 236 67.8
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 1.7e-76 290.4 260 62.7
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 6.2e-71 271.9 208 64.4
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 2.4e-70 270.0 208 66.3
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 3.1e-70 269.6 205 66.3
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 7.6e-69 265.0 278 52.9
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 8.4e-68 261.5 205 64.4
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 1.4e-67 260.8 214 62.1
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 1.4e-67 260.8 210 61.0
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 4.2e-67 259.2 228 58.8
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 5.5e-67 258.8 230 60.9
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 7.1e-67 258.5 217 59.9
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 4.6e-66 255.8 224 58.0
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 7.9e-66 255.0 231 55.4
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 1.0e-65 254.6 265 54.0
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 1.8e-65 253.8 227 58.1
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 2.3e-65 253.4 207 61.8
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 2.3e-65 253.4 244 54.9
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 1.1e-64 251.1 241 55.2
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 1.5e-64 250.8 268 53.0
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 1.5e-64 250.8 267 50.9
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 1.9e-64 250.4 208 60.1
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 2.5e-64 250.0 177 67.2
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 3.3e-64 249.6 227 57.7
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 4.3e-64 249.2 218 62.8
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 4.3e-64 249.2 172 68.6
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 4.3e-64 249.2 268 53.4
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 4.3e-64 249.2 191 65.4
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 5.7e-64 248.8 253 53.8
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 9.6e-64 248.1 228 57.9
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 1.3e-63 247.7 268 50.7
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 1.6e-63 247.3 268 54.9
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 1.6e-63 247.3 182 64.3
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 2.1e-63 246.9 208 58.7
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 6.2e-63 245.4 212 58.5
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 6.2e-63 245.4 207 58.9
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 1.1e-62 244.6 212 58.0
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 1.8e-62 243.8 207 61.4
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 3.1e-62 243.0 239 54.0
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 5.3e-62 242.3 245 53.1
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 5.3e-62 242.3 214 57.5
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 6.9e-62 241.9 265 52.1
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 9.0e-62 241.5 265 51.7
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 9.0e-62 241.5 205 60.5
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 2.0e-61 240.4 274 50.4
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 2.0e-61 240.4 214 57.5
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 2.0e-61 240.4 214 58.9
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 2.6e-61 240.0 206 58.7
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 2.6e-61 240.0 236 54.2
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 2.6e-61 240.0 213 58.2
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 5.8e-61 238.8 214 57.0
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 1.0e-60 238.0 265 52.1
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 1.3e-60 237.7 266 51.1
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 1.7e-60 237.3 212 57.5
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 2.2e-60 236.9 205 59.0
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 2.2e-60 236.9 213 57.3
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 2.9e-60 236.5 205 62.9
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 3.8e-60 236.1 265 50.9
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 3.8e-60 236.1 238 55.5
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 5.0e-60 235.7 215 57.2
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 1.4e-59 234.2 228 54.8
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.9e-59 233.8 268 52.6
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 3.2e-59 233.0 229 52.0
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 5.5e-59 232.3 225 54.7
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 7.1e-59 231.9 225 55.1
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 9.3e-59 231.5 228 53.9
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 2.7e-58 229.9 219 54.8
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 3.5e-58 229.6 174 62.6
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 4.6e-58 229.2 181 61.9
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 6.1e-58 228.8 197 59.4
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 6.1e-58 228.8 219 54.3
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 1.8e-57 227.3 263 49.0
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 2.3e-57 226.9 176 60.2
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 6.7e-57 225.3 301 48.2
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 8.7e-57 224.9 208 53.8
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 1.5e-56 224.2 264 48.9
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 1.9e-56 223.8 217 52.5
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 1.9e-56 223.8 270 48.1
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 4.3e-56 222.6 206 56.8
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 1.3e-55 221.1 205 55.6
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 1.1e-54 218.0 209 55.5
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 6.9e-54 215.3 218 54.6
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.5e-53 214.2 272 50.0
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 5.9e-53 212.2 204 53.9
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 1.1e-51 208.0 279 43.0
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 1.4e-51 207.6 314 39.8
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 8.2e-47 191.8 138 64.5
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 2.7e-42 176.8 206 49.5
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 2.0e-40 170.6 222 41.0
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 8.2e-39 165.2 195 40.0
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 1.2e-37 161.4 145 57.9
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 5.5e-35 152.5 197 41.6
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 1.3e-31 141.4 129 57.4
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 1.2e-26 124.8 171 39.2
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 3.6e-26 123.2 194 35.6
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 2.6e-24 117.1 81 67.9
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 1.7e-23 114.4 125 51.2
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 9.1e-22 108.6 84 61.9
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 1.6e-18 97.8 223 34.1
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 1.8e-17 94.4 248 29.8
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 8.8e-17 92.0 74 58.1
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 1.2e-13 81.6 183 29.5
HPP92_015474 Vanilla planifolia HOM05D006984 ORTHO05D008773 3.4e-08 63.5 49 59.2
Psat6g152440 Pisum sativum HOM05D006984 ORTHO05D000789 7.5e-08 62.4 32 81.2
Psat6g152480 Pisum sativum HOM05D006984 ORTHO05D008773 7.5e-08 62.4 32 81.2
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 7.5e-08 62.4 32 81.2


User provided reference genes

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