Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.H6EN9A Arachis hypogaea HOM05D003720 ORTHO05D005312 2.8e-135 485.3 252 100.0
arahy.Tifrunner.gnm1.ann1.GFGC5E Arachis hypogaea HOM05D003720 ORTHO05D005312 5.1e-121 438.0 256 92.6
arahy.Tifrunner.gnm1.ann1.NRTP45 Arachis hypogaea HOM05D003720 ORTHO05D005312 1.1e-120 436.8 256 92.6
arahy.Tifrunner.gnm1.ann1.F3YJTF Arachis hypogaea HOM05D003720 ORTHO05D005312 4.3e-104 381.7 325 68.9
arahy.Tifrunner.gnm1.ann1.S8F21X Arachis hypogaea HOM05D003720 ORTHO05D005312 4.3e-104 381.7 325 68.9
Ca_02544_v3 Cicer arietinum L. HOM05D003720 ORTHO05D005312 6.4e-100 367.9 325 66.2
Glyma.05G012400 Glycine max HOM05D003720 ORTHO05D005312 2.4e-99 365.9 325 65.8
Lj4g0009521 Lotus japonicus HOM05D003720 ORTHO05D005312 3.2e-99 365.5 325 66.2
Dinv41570 Davidia involucrata HOM05D003720 ORTHO05D005312 4.2e-99 365.2 325 64.9
Medtr4g112045 Medicago truncatula HOM05D003720 ORTHO05D005312 1.2e-98 363.6 325 65.5
VMungo1215G1596 Vigna mungo HOM05D003720 ORTHO05D005312 1.2e-98 363.6 325 65.5
Psat4g042800 Pisum sativum HOM05D003720 ORTHO05D005312 1.6e-98 363.2 325 65.5
Phvul.003G176300 Phaseolus vulgaris HOM05D003720 ORTHO05D005312 2.7e-98 362.5 325 65.5
Atru.chr7.1286 Acer truncatum HOM05D003720 ORTHO05D005312 4.6e-98 361.7 325 64.9
Lalb_Chr12g0197621 Lupinus albus HOM05D003720 ORTHO05D005312 6.0e-98 361.3 325 65.5
Prupe.7G234400 Prunus persica HOM05D003720 ORTHO05D005312 6.0e-98 361.3 325 64.6
Glyma.17G120500 Glycine max HOM05D003720 ORTHO05D005312 7.9e-98 360.9 325 64.9
Lalb_Chr13g0302281 Lupinus albus HOM05D003720 ORTHO05D005312 7.9e-98 360.9 325 65.8
TPR.G26776 Trifolium pratense HOM05D003720 ORTHO05D005312 7.9e-98 360.9 325 65.2
TAR626G1854 Trochodendron aralioides HOM05D003720 ORTHO05D005312 1.3e-97 360.1 325 63.7
Lj7C641G5 Lonicera japonica HOM05D003720 ORTHO05D005312 3.9e-97 358.6 325 64.0
Peaxi162Scf00256g00817 Petunia axillaris HOM05D003720 ORTHO05D005312 3.9e-97 358.6 301 68.8
PGR102G1985 Punica granatum HOM05D003720 ORTHO05D005312 3.9e-97 358.6 325 64.3
Cc06_g09260 Coffea canephora HOM05D003720 ORTHO05D005312 5.1e-97 358.2 325 64.0
Dinv36598 Davidia involucrata HOM05D003720 ORTHO05D005312 5.1e-97 358.2 325 64.0
FAN28G0537 Fragaria x ananassa HOM05D003720 ORTHO05D005312 1.1e-96 357.1 325 63.4
Manes.03G068200 Manihot esculenta HOM05D003720 ORTHO05D005312 1.5e-96 356.7 325 64.3
QL02p086231 Quercus lobata HOM05D003720 ORTHO05D005312 1.5e-96 356.7 325 64.0
ATR0561G176 Amborella trichopoda HOM05D003720 ORTHO05D005312 1.9e-96 356.3 325 64.0
Nitab4.5_0000100g0300 Nicotiana tabacum HOM05D003720 ORTHO05D005312 1.9e-96 356.3 325 64.0
RcHm_v2.0_Chr2g0089861 Rosa chinensis HOM05D003720 ORTHO05D005312 1.9e-96 356.3 325 63.7
MELO3C025310.2 Cucumis melo HOM05D003720 ORTHO05D005312 2.5e-96 355.9 325 63.7
MD02G1042600 Malus domestica HOM05D003720 ORTHO05D005312 2.5e-96 355.9 325 64.0
ClCG06G010450 Citrullus lanatus HOM05D003720 ORTHO05D005312 3.3e-96 355.5 325 63.4
Gohir.D06G058501 Gossypium hirsutum HOM05D003720 ORTHO05D005312 3.3e-96 355.5 325 64.3
Gorai.010G068600 Gossypium raimondii HOM05D003720 ORTHO05D005312 3.3e-96 355.5 325 64.3
CiPaw.03G235900 Carya illinoinensis HOM05D003720 ORTHO05D005312 4.3e-96 355.1 325 63.7
CSS0011692 Camellia sinensis var. sinensis HOM05D003720 ORTHO05D005312 5.6e-96 354.8 325 63.1
CSS0041174 Camellia sinensis var. sinensis HOM05D003720 ORTHO05D005312 5.6e-96 354.8 325 63.1
Haze_25676 Corylus avellana HOM05D003720 ORTHO05D005312 5.6e-96 354.8 325 63.7
Thecc.09G115700 Theobroma cacao HOM05D003720 ORTHO05D005312 5.6e-96 354.8 325 64.6
Cfa003295 Carpinus fangiana HOM05D003720 ORTHO05D005312 7.4e-96 354.4 325 63.7
CsaV3_1G030910 Cucumis sativus L. HOM05D003720 ORTHO05D005312 7.4e-96 354.4 325 63.1
Gohir.A06G060200 Gossypium hirsutum HOM05D003720 ORTHO05D005312 7.4e-96 354.4 325 64.3
GSVIVG01015442001 Vitis vinifera HOM05D003720 ORTHO05D005312 7.4e-96 354.4 322 63.7
FvH4_1g04290 Fragaria vesca HOM05D003720 ORTHO05D005312 9.6e-96 354.0 325 63.4
FAN19G2601 Fragaria x ananassa HOM05D003720 ORTHO05D005312 9.6e-96 354.0 325 63.4
Hma1.2p1_0245F.1_g101400 Hydrangea macrophylla HOM05D003720 ORTHO05D005312 9.6e-96 354.0 326 63.2
Os10g0575200 Oryza sativa ssp. japonica HOM05D003720 ORTHO05D005312 9.6e-96 354.0 325 63.1
Nitab4.5_0002116g0040 Nicotiana tabacum HOM05D003720 ORTHO05D005312 1.6e-95 353.2 325 63.7
SalBow6G2056 Salvia bowleyana HOM05D003720 ORTHO05D005312 2.1e-95 352.8 325 63.7
SGA_v2.0_scaffold45G17079 Striga asiatica HOM05D003720 ORTHO05D005312 2.1e-95 352.8 325 63.7
Manes.16G064500 Manihot esculenta HOM05D003720 ORTHO05D005312 2.8e-95 352.4 325 63.4
MD15G1181200 Malus domestica HOM05D003720 ORTHO05D005312 3.7e-95 352.1 325 63.7
Ciclev10007224m.g Citrus clementina HOM05D003720 ORTHO05D005312 4.8e-95 351.7 325 63.4
Potri.018G072600 Populus trichocarpa HOM05D003720 ORTHO05D005312 4.8e-95 351.7 325 63.1
FAN26G1450 Fragaria x ananassa HOM05D003720 ORTHO05D005312 6.2e-95 351.3 325 63.1
Nn8g39280 Nelumbo nucifera HOM05D003720 ORTHO05D005312 6.2e-95 351.3 325 63.1
PSO170G5328 Papaver somniferum HOM05D003720 ORTHO05D005312 6.2e-95 351.3 325 62.2
Sopen08g011820 Solanum pennellii HOM05D003720 ORTHO05D005312 6.2e-95 351.3 325 63.7
CANSAT56G4488 Cannabis sativa HOM05D003720 ORTHO05D005312 8.1e-95 350.9 325 62.8
Eucgr.C04138 Eucalyptus grandis HOM05D003720 ORTHO05D005312 8.1e-95 350.9 325 63.4
PGSC0003DMG400013949 Solanum tuberosum HOM05D003720 ORTHO05D005312 8.1e-95 350.9 325 63.7
Duzib168G1140 Durio zibethinus HOM05D003720 ORTHO05D005312 1.1e-94 350.5 325 64.0
Hund12707 Selenicereus undatus HOM05D003720 ORTHO05D005312 1.1e-94 350.5 325 63.4
Actinidia07451 Actinidia chinensis HOM05D003720 ORTHO05D005312 1.4e-94 350.1 325 62.2
Aqoxy7G01852 Aquilegia oxysepala HOM05D003720 ORTHO05D005312 2.4e-94 349.4 325 62.2
PSO357G0216 Papaver somniferum HOM05D003720 ORTHO05D005312 2.4e-94 349.4 325 61.8
TWI63G0927 Tripterygium wilfordii HOM05D003720 ORTHO05D005312 3.1e-94 349.0 325 62.5
TAR383G0813 Trochodendron aralioides HOM05D003720 ORTHO05D005312 3.1e-94 349.0 325 62.5
Oeu002223.1 Olea europaea HOM05D003720 ORTHO05D005312 4.0e-94 348.6 325 61.8
Sed0024242 Sechium edule HOM05D003720 ORTHO05D005312 4.0e-94 348.6 325 61.8
Solyc08g021920.4 Solanum lycopersicum HOM05D003720 ORTHO05D005312 4.0e-94 348.6 325 63.1
DCAR_028737 Daucus carota HOM05D003720 ORTHO05D005312 5.3e-94 348.2 325 61.8
Sabra18G0064000 Salix brachista HOM05D003720 ORTHO05D005312 6.9e-94 347.8 325 62.8
AUR62031297 Chenopodium quinoa HOM05D003720 ORTHO05D005312 4.5e-93 345.1 325 62.8
Lsat_1_v5_gn_5_99761 Lactuca sativa HOM05D003720 ORTHO05D005312 5.8e-93 344.7 325 61.5
Sc08g0004790 Simmondsia chinensis HOM05D003720 ORTHO05D005312 7.6e-93 344.4 325 62.5
CAN.G368.4 Capsicum annuum HOM05D003720 ORTHO05D005312 2.2e-92 342.8 325 62.8
AUR62027382 Chenopodium quinoa HOM05D003720 ORTHO05D005312 2.2e-92 342.8 325 62.8
Gorai.009G022700 Gossypium raimondii HOM05D003720 ORTHO05D005312 2.9e-92 342.4 325 62.5
MSTRG.6069 Avicennia marina HOM05D003720 ORTHO05D005312 3.8e-92 342.0 325 61.5
THA.LOC104809021 Tarenaya hassleriana HOM05D003720 ORTHO05D005312 3.8e-92 342.0 325 61.8
HanXRQChr10g0317421 Helianthus annuus HOM05D003720 ORTHO05D005312 4.9e-92 341.7 325 61.2
CARHR119040 Cardamine hirsuta HOM05D003720 ORTHO05D005312 8.4e-92 340.9 325 62.2
Migut.J01184 Erythranthe guttata HOM05D003720 ORTHO05D005312 8.4e-92 340.9 325 61.2
HPP92_014850 Vanilla planifolia HOM05D003720 ORTHO05D005312 8.4e-92 340.9 325 61.2
Gohir.A05G021000 Gossypium hirsutum HOM05D003720 ORTHO05D005312 2.5e-91 339.3 325 62.2
BolC4t23961H Brassica oleracea HOM05D003720 ORTHO05D005312 3.2e-91 339.0 325 60.9
A07p17900 Brassica napus HOM05D003720 ORTHO05D005312 4.2e-91 338.6 325 61.2
BraA07t29508Z Brassica rapa HOM05D003720 ORTHO05D005312 4.2e-91 338.6 325 61.2
BcaC02g10846 Brassica carinata HOM05D003720 ORTHO05D005312 5.5e-91 338.2 325 60.9
C04p24570 Brassica napus HOM05D003720 ORTHO05D005312 5.5e-91 338.2 325 60.9
ECA234G2971 Erigeron canadensis HOM05D003720 ORTHO05D005312 9.3e-91 337.4 325 60.3
Thhalv10001876m.g Eutrema salsugineum HOM05D003720 ORTHO05D005312 1.2e-90 337.0 325 61.2
CDE07G1594 Ceratophyllum demersum HOM05D003720 ORTHO05D005312 2.1e-90 336.3 325 60.6
Zm00001eb390320 Zea mays HOM05D003720 ORTHO05D005312 2.7e-90 335.9 325 60.3
AL4G20110 Arabidopsis lyrata HOM05D003720 ORTHO05D005312 3.5e-90 335.5 325 61.2
AT2G26890 Arabidopsis thaliana HOM05D003720 ORTHO05D005312 3.5e-90 335.5 325 61.2
Carub.0004s0739 Capsella rubella HOM05D003720 ORTHO05D005312 3.5e-90 335.5 325 61.2
Aa31LG5G8890 Aethionema arabicum HOM05D003720 ORTHO05D005312 6.0e-90 334.7 325 61.2
Rhsim03G0245400 Rhododendron simsii HOM05D003720 ORTHO05D005312 6.0e-90 334.7 325 59.7
Sp4g08590 Schrenkiella parvula HOM05D003720 ORTHO05D005312 1.0e-89 334.0 325 61.2
vmacro06189 Vaccinium macrocarpon HOM05D003720 ORTHO05D005312 5.1e-89 331.6 325 59.1
EL10Ac8g19346 Beta vulgaris HOM05D003720 ORTHO05D005312 8.7e-89 330.9 355 57.5
COL.COLO4_34940 Corchorus olitorius HOM05D003720 ORTHO05D005312 1.8e-86 323.2 325 60.3
SEGI_35777 Sequoiadendron giganteum HOM05D003720 ORTHO05D005312 1.3e-84 317.0 325 57.8
Mapoly0043s0138 Marchantia polymorpha HOM05D003720 ORTHO05D005312 6.0e-82 308.1 325 56.3
Pp3c13_3460 Physcomitrium patens HOM05D003720 ORTHO05D005312 5.7e-80 301.6 325 54.5
AagrBONN_evm.TU.Sc2ySwM_368.1081 Anthoceros agrestis HOM05D003720 ORTHO05D005312 1.4e-78 297.0 325 53.5
unitig_22.g6632 Utricularia gibba HOM05D003720 ORTHO05D005312 3.1e-78 295.8 335 54.9
Pp3c4_24650 Physcomitrium patens HOM05D003720 ORTHO05D005312 4.5e-77 292.0 325 52.0
SMO358G0126 Selaginella moellendorffii HOM05D003720 ORTHO05D005312 7.7e-77 291.2 325 53.5
Gohir.D05G022400 Gossypium hirsutum HOM05D003720 ORTHO05D005312 1.4e-75 287.0 324 55.9
Actinidia26424 Actinidia chinensis HOM05D003720 ORTHO05D005312 1.2e-69 267.3 278 58.3
CBR_g4479 Chara braunii HOM05D003720 ORTHO05D005312 1.5e-69 266.9 325 49.2
arahy.Tifrunner.gnm1.ann1.HL09EZ Arachis hypogaea HOM05D003720 ORTHO05D005312 2.5e-67 259.6 258 63.6
CDE06G2493 Ceratophyllum demersum HOM05D003720 ORTHO05D005312 7.7e-53 211.5 144 79.2
arahy.Tifrunner.gnm1.ann1.CMVH84 Arachis hypogaea HOM05D003720 ORTHO05D005312 1.7e-44 183.7 113 92.0
arahy.Tifrunner.gnm1.ann1.UX9YIA Arachis hypogaea HOM05D003720 ORTHO05D005312 6.5e-44 181.8 115 90.4
arahy.Tifrunner.gnm1.ann1.QKW76S Arachis hypogaea HOM05D003720 ORTHO05D005312 8.5e-44 181.4 112 92.0
Cpa.g.sc23.154 Carica papaya HOM05D003720 ORTHO05D005312 1.9e-43 180.3 124 74.2
FAN23G2146 Fragaria x ananassa HOM05D003720 ORTHO05D005312 4.2e-43 179.1 124 74.2
Cpa.g.sc23.156 Carica papaya HOM05D003720 ORTHO05D005312 6.8e-41 171.8 111 84.7
SHI03186 Sapria himalayana HOM05D003720 ORTHO05D005312 1.3e-39 167.5 124 68.5
arahy.Tifrunner.gnm1.ann1.XZYA5I Arachis hypogaea HOM05D003720 ORTHO05D005312 1.5e-35 154.1 108 80.6
SHI03184 Sapria himalayana HOM05D003720 ORTHO05D005312 3.3e-35 152.9 111 76.6
arahy.Tifrunner.gnm1.ann1.JURE59 Arachis hypogaea HOM05D003720 ORTHO05D005312 4.7e-34 149.1 85 94.1
PRCOL_00006435 Prasinoderma coloniale HOM05D003720 ORTHO05D005312 1.5e-27 127.5 355 29.9
Cre12.g486209 Chlamydomonas reinhardtii HOM05D003720 ORTHO05D005312 1.0e-20 104.8 132 47.0
CDE06G1063 Ceratophyllum demersum HOM05D003720 ORTHO05D005312 1.2e-13 81.3 73 65.8


User provided reference genes

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