Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.H5D5IL Arachis hypogaea HOM05D006107 ORTHO05D007455 0.0e+00 1199.9 596 100.0
arahy.Tifrunner.gnm1.ann1.Q9TTL4 Arachis hypogaea HOM05D006107 ORTHO05D007455 0.0e+00 1099.0 596 93.5
Lalb_Chr16g0384781 Lupinus albus HOM05D006107 ORTHO05D007455 1.1e-291 1006.1 596 84.9
Lj4g0016203 Lotus japonicus HOM05D006107 ORTHO05D007455 2.3e-281 971.8 593 83.0
QL11p035424 Quercus lobata HOM05D006107 ORTHO05D007455 6.7e-281 970.3 597 81.9
Medtr4g085890 Medicago truncatula HOM05D006107 ORTHO05D007455 3.3e-280 968.0 596 82.0
Atru.chr5.2684 Acer truncatum HOM05D006107 ORTHO05D007455 2.0e-277 958.7 597 80.6
Psat7g125400 Pisum sativum HOM05D006107 ORTHO05D007455 5.9e-277 957.2 593 81.1
Ca_18695_v3 Cicer arietinum L. HOM05D006107 ORTHO05D007455 3.8e-276 954.5 547 86.3
Glyma.07G213500 Glycine max HOM05D006107 ORTHO05D007455 3.8e-276 954.5 594 81.6
ClCG02G006000 Citrullus lanatus HOM05D006107 ORTHO05D007455 1.4e-275 952.6 605 79.0
TPR.G12695 Trifolium pratense HOM05D006107 ORTHO05D007455 1.9e-275 952.2 587 81.4
VMungo0251G2128 Vigna mungo HOM05D006107 ORTHO05D007455 1.9e-275 952.2 551 86.2
Prupe.8G126800 Prunus persica HOM05D006107 ORTHO05D007455 1.6e-274 949.1 602 80.2
TWI31G1484 Tripterygium wilfordii HOM05D006107 ORTHO05D007455 3.6e-274 948.0 570 82.8
CsaV3_7G008530 Cucumis sativus L. HOM05D006107 ORTHO05D007455 4.7e-274 947.6 577 81.3
Glyma.02G131500 Glycine max HOM05D006107 ORTHO05D007455 1.0e-273 946.4 548 86.3
Potri.009G100800 Populus trichocarpa HOM05D006107 ORTHO05D007455 1.0e-273 946.4 573 82.0
Rhsim05G0085900 Rhododendron simsii HOM05D006107 ORTHO05D007455 1.8e-273 945.7 577 81.6
CSS0002619 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 2.3e-273 945.3 583 81.0
Sabra09G0076700 Salix brachista HOM05D006107 ORTHO05D007455 2.3e-273 945.3 573 81.8
Duzib132G0557 Durio zibethinus HOM05D006107 ORTHO05D007455 6.7e-273 943.7 577 81.3
Phvul.003G291600 Phaseolus vulgaris HOM05D006107 ORTHO05D007455 6.7e-273 943.7 548 85.8
CSS0005791 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 8.8e-273 943.3 583 80.8
Sed0010263 Sechium edule HOM05D006107 ORTHO05D007455 8.8e-273 943.3 573 82.0
Hma1.2p1_0474F.1_g160480 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 1.1e-272 943.0 572 81.1
RcHm_v2.0_Chr6g0257681 Rosa chinensis HOM05D006107 ORTHO05D007455 2.0e-272 942.2 583 80.8
Ciclev10028103m.g Citrus clementina HOM05D006107 ORTHO05D007455 3.3e-272 941.4 593 79.4
FAN15G1599 Fragaria x ananassa HOM05D006107 ORTHO05D007455 3.3e-272 941.4 584 80.8
FAN20G2345 Fragaria x ananassa HOM05D006107 ORTHO05D007455 3.3e-272 941.4 584 80.8
Thecc.02G102000 Theobroma cacao HOM05D006107 ORTHO05D007455 5.7e-272 940.6 570 81.8
FvH4_2g05870 Fragaria vesca HOM05D006107 ORTHO05D007455 3.7e-271 937.9 584 80.5
Eucgr.G01434 Eucalyptus grandis HOM05D006107 ORTHO05D007455 4.8e-271 937.6 573 81.8
MD05G1082300 Malus domestica HOM05D006107 ORTHO05D007455 8.2e-271 936.8 574 82.1
PGR042G0079 Punica granatum HOM05D006107 ORTHO05D007455 1.4e-270 936.0 574 81.7
GSVIVG01031728001 Vitis vinifera HOM05D006107 ORTHO05D007455 2.4e-270 935.3 571 82.7
Gohir.A12G023600 Gossypium hirsutum HOM05D006107 ORTHO05D007455 4.1e-270 934.5 570 80.5
FAN24G1318 Fragaria x ananassa HOM05D006107 ORTHO05D007455 5.3e-270 934.1 584 80.3
Gorai.008G024600 Gossypium raimondii HOM05D006107 ORTHO05D007455 2.6e-269 931.8 572 80.1
Gohir.D12G024200 Gossypium hirsutum HOM05D006107 ORTHO05D007455 4.5e-269 931.0 572 79.9
Haze_10087 Corylus avellana HOM05D006107 ORTHO05D007455 2.5e-267 925.2 573 81.3
THA.LOC104807265 Tarenaya hassleriana HOM05D006107 ORTHO05D007455 1.5e-264 916.0 576 78.0
MBI03_g13479_MAGBIO Magnolia biondii HOM05D006107 ORTHO05D007455 2.6e-264 915.2 573 77.7
Lj5A210T89 Lonicera japonica HOM05D006107 ORTHO05D007455 9.7e-264 913.3 590 77.1
Cfa004529 Carpinus fangiana HOM05D006107 ORTHO05D007455 1.7e-263 912.5 534 85.4
Sc18g0004170 Simmondsia chinensis HOM05D006107 ORTHO05D007455 2.2e-263 912.1 602 75.7
RcHm_v2.0_Chr6g0257701 Rosa chinensis HOM05D006107 ORTHO05D007455 3.7e-263 911.4 583 77.7
Peaxi162Scf00016g01935 Petunia axillaris HOM05D006107 ORTHO05D007455 2.4e-262 908.7 585 77.9
SGA_v2.0_scaffold90G27632 Striga asiatica HOM05D006107 ORTHO05D007455 4.1e-262 907.9 601 75.9
CANSAT25G2960 Cannabis sativa HOM05D006107 ORTHO05D007455 1.2e-261 906.4 587 76.3
AT4G34030 Arabidopsis thaliana HOM05D006107 ORTHO05D007455 1.6e-261 906.0 575 76.3
vmacro19505 Vaccinium macrocarpon HOM05D006107 ORTHO05D007455 2.6e-261 905.2 697 68.4
BcaB03g11861 Brassica carinata HOM05D006107 ORTHO05D007455 7.7e-261 903.7 577 75.9
AL7G17360 Arabidopsis lyrata HOM05D006107 ORTHO05D007455 1.0e-260 903.3 575 76.3
Thhalv10024753m.g Eutrema salsugineum HOM05D006107 ORTHO05D007455 1.7e-260 902.5 575 76.0
TAR376G0662 Trochodendron aralioides HOM05D006107 ORTHO05D007455 2.9e-260 901.7 572 78.0
Sp7g31760 Schrenkiella parvula HOM05D006107 ORTHO05D007455 3.8e-260 901.4 575 76.0
BraA08t33679Z Brassica rapa HOM05D006107 ORTHO05D007455 6.5e-260 900.6 577 75.9
Migut.B00356 Erythranthe guttata HOM05D006107 ORTHO05D007455 6.5e-260 900.6 572 78.0
Hund06173 Selenicereus undatus HOM05D006107 ORTHO05D007455 1.5e-259 899.4 588 76.5
A08p17180 Brassica napus HOM05D006107 ORTHO05D007455 2.5e-259 898.7 577 75.7
BcaC01g00937 Brassica carinata HOM05D006107 ORTHO05D007455 1.2e-258 896.3 573 76.1
Carub.0007s0637 Capsella rubella HOM05D006107 ORTHO05D007455 2.7e-258 895.2 573 75.0
COL.COLO4_32644 Corchorus olitorius HOM05D006107 ORTHO05D007455 3.6e-258 894.8 572 78.5
C03p86150 Brassica napus HOM05D006107 ORTHO05D007455 4.7e-258 894.4 573 75.7
EL10Ac1g02230 Beta vulgaris HOM05D006107 ORTHO05D007455 6.1e-258 894.0 586 75.9
BolC3t20903H Brassica oleracea HOM05D006107 ORTHO05D007455 6.1e-258 894.0 573 75.9
Aa31LG2G16450 Aethionema arabicum HOM05D006107 ORTHO05D007455 8.0e-258 893.6 575 75.7
PSO675G2583 Papaver somniferum HOM05D006107 ORTHO05D007455 8.0e-258 893.6 581 76.8
SalBow6G1673 Salvia bowleyana HOM05D006107 ORTHO05D007455 3.0e-257 891.7 567 78.3
Nitab4.5_0018866g0010 Nicotiana tabacum HOM05D006107 ORTHO05D007455 4.0e-257 891.3 579 77.4
PSO541G4551 Papaver somniferum HOM05D006107 ORTHO05D007455 1.7e-255 885.9 581 76.2
Cc02_g18880 Coffea canephora HOM05D006107 ORTHO05D007455 2.2e-255 885.6 547 80.1
CAN.G1041.37 Capsicum annuum HOM05D006107 ORTHO05D007455 3.7e-255 884.8 577 76.4
Sopen01g050230 Solanum pennellii HOM05D006107 ORTHO05D007455 4.8e-255 884.4 579 75.8
Solyc01g108030.4 Solanum lycopersicum HOM05D006107 ORTHO05D007455 8.2e-255 883.6 579 75.8
A03p62570 Brassica napus HOM05D006107 ORTHO05D007455 1.4e-254 882.9 573 75.0
C07p60130 Brassica napus HOM05D006107 ORTHO05D007455 9.1e-254 880.2 573 75.0
BolC7t46453H Brassica oleracea HOM05D006107 ORTHO05D007455 9.1e-254 880.2 573 75.0
Aqoxy6G01306 Aquilegia oxysepala HOM05D006107 ORTHO05D007455 1.0e-252 876.7 587 73.3
AUR62035403 Chenopodium quinoa HOM05D006107 ORTHO05D007455 1.0e-252 876.7 608 73.2
HPP92_004071 Vanilla planifolia HOM05D006107 ORTHO05D007455 1.0e-252 876.7 570 75.6
HanXRQChr11g0331361 Helianthus annuus HOM05D006107 ORTHO05D007455 6.5e-252 874.0 574 74.6
ECA236G2832 Erigeron canadensis HOM05D006107 ORTHO05D007455 3.6e-250 868.2 568 74.8
PGSC0003DMG400025888 Solanum tuberosum HOM05D006107 ORTHO05D007455 4.4e-248 861.3 547 77.7
DCAR_001629 Daucus carota HOM05D006107 ORTHO05D007455 9.8e-248 860.1 547 77.5
Lsat_1_v5_gn_7_86820 Lactuca sativa HOM05D006107 ORTHO05D007455 2.2e-247 859.0 561 74.9
Dinv42164 Davidia involucrata HOM05D006107 ORTHO05D007455 4.8e-247 857.8 581 74.9
Zm00001eb179170 Zea mays HOM05D006107 ORTHO05D007455 1.8e-246 855.9 569 73.8
ATR1126G046 Amborella trichopoda HOM05D006107 ORTHO05D007455 4.1e-246 854.7 598 72.6
Nitab4.5_0001428g0130 Nicotiana tabacum HOM05D006107 ORTHO05D007455 1.4e-241 839.7 576 73.3
CDE10G1185 Ceratophyllum demersum HOM05D006107 ORTHO05D007455 3.0e-241 838.6 590 71.2
BcaNung03357 Brassica carinata HOM05D006107 ORTHO05D007455 4.9e-239 831.2 574 72.1
unitig_21.g20740 Utricularia gibba HOM05D006107 ORTHO05D007455 8.0e-234 813.9 571 71.5
Nn5g30280 Nelumbo nucifera HOM05D006107 ORTHO05D007455 4.0e-233 811.6 474 84.2
CiPaw.05G007100 Carya illinoinensis HOM05D006107 ORTHO05D007455 6.8e-233 810.8 449 89.3
Pp3c3_22750 Physcomitrium patens HOM05D006107 ORTHO05D007455 1.2e-232 810.1 584 68.8
Oeu007292.2 Olea europaea HOM05D006107 ORTHO05D007455 1.4e-230 803.1 475 82.3
Mapoly0009s0150 Marchantia polymorpha HOM05D006107 ORTHO05D007455 1.9e-230 802.7 570 70.2
CARHR242170 Cardamine hirsuta HOM05D006107 ORTHO05D007455 4.1e-230 801.6 474 80.8
FAN27G3033 Fragaria x ananassa HOM05D006107 ORTHO05D007455 5.4e-230 801.2 547 75.1
MELO3C018456.2 Cucumis melo HOM05D006107 ORTHO05D007455 4.6e-229 798.1 504 79.4
Cpa.g.sc62.2 Carica papaya HOM05D006107 ORTHO05D007455 8.6e-228 793.9 486 81.9
Manes.07G078100 Manihot esculenta HOM05D006107 ORTHO05D007455 1.9e-227 792.7 453 87.2
AagrBONN_evm.TU.Sc2ySwM_368.3420 Anthoceros agrestis HOM05D006107 ORTHO05D007455 4.9e-223 778.1 568 67.6
SEGI_09747 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 6.8e-217 757.7 474 78.7
HPP92_004116 Vanilla planifolia HOM05D006107 ORTHO05D007455 1.0e-212 743.8 570 66.8
SMO174G0062 Selaginella moellendorffii HOM05D006107 ORTHO05D007455 3.8e-199 698.7 566 62.9
AUR62041887 Chenopodium quinoa HOM05D006107 ORTHO05D007455 2.9e-191 672.5 474 71.7
Cre03.g181200 Chlamydomonas reinhardtii HOM05D006107 ORTHO05D007455 3.3e-187 659.1 570 58.4
Actinidia17868 Actinidia chinensis HOM05D006107 ORTHO05D007455 8.7e-180 634.4 589 59.6
Haze_26655 Corylus avellana HOM05D006107 ORTHO05D007455 7.9e-165 584.7 594 51.2
PRCOL_00006414 Prasinoderma coloniale HOM05D006107 ORTHO05D007455 4.8e-162 575.5 552 54.5
Haze_27116 Corylus avellana HOM05D006107 ORTHO05D007455 8.0e-149 531.6 485 56.1
Haze_27030 Corylus avellana HOM05D006107 ORTHO05D007455 8.8e-148 528.1 550 51.1
Ah.00g000150 Amaranthus hybridus HOM05D006107 ORTHO05D007455 8.8e-140 501.5 342 74.6
Hma1.2p1_0474F.1_g160470 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 5.2e-124 449.1 275 80.0
Haze_26656 Corylus avellana HOM05D006107 ORTHO05D007455 1.3e-85 321.6 264 59.1
QL11p035444 Quercus lobata HOM05D006107 ORTHO05D007455 2.8e-77 293.9 155 90.3
CBR_g54985 Chara braunii HOM05D006107 ORTHO05D007455 6.5e-50 203.0 525 28.8
Medtr3g011860 Medicago truncatula HOM05D006107 ORTHO05D007455 5.9e-43 179.9 218 48.6
QL11p035447 Quercus lobata HOM05D006107 ORTHO05D007455 5.9e-35 153.3 90 84.4
Cfa025742 Carpinus fangiana HOM05D006107 ORTHO05D007455 1.7e-26 125.2 504 25.4
CARHR242160 Cardamine hirsuta HOM05D006107 ORTHO05D007455 5.5e-25 120.2 92 64.1
QL11p035449 Quercus lobata HOM05D006107 ORTHO05D007455 9.4e-25 119.4 66 83.3
SEGI_09117 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 1.3e-18 99.0 100 48.0
Solyc01g108060.2 Solanum lycopersicum HOM05D006107 ORTHO05D007455 1.4e-07 62.4 30 90.0
unitig_744.g24231 Utricularia gibba HOM05D006107 ORTHO05D007455 5.7e-06 57.0 55 45.5


User provided reference genes

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