Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.H4BLQC Arachis hypogaea HOM05D000300 ORTHO05D000383 4.1e-34 147.5 76 100.0
arahy.Tifrunner.gnm1.ann1.QWVG1Y Arachis hypogaea HOM05D000300 ORTHO05D000383 2.5e-23 111.7 63 88.9
arahy.Tifrunner.gnm1.ann1.YT9B61 Arachis hypogaea HOM05D000300 ORTHO05D000383 3.3e-23 111.3 63 88.9
arahy.Tifrunner.gnm1.ann1.N35TLR Arachis hypogaea HOM05D000300 ORTHO05D000383 4.3e-23 110.9 63 88.9
Lalb_Chr14g0366861 Lupinus albus HOM05D000300 ORTHO05D000383 1.4e-10 69.3 63 55.6
vmacro09281 Vaccinium macrocarpon HOM05D000300 ORTHO05D000383 4.1e-10 67.8 63 52.4
Actinidia03955 Actinidia chinensis HOM05D000300 ORTHO05D000383 7.1e-10 67.0 64 54.7
Ca_25911_v3 Cicer arietinum L. HOM05D000300 ORTHO05D000383 7.1e-10 67.0 73 49.3
Lj3g0008346 Lotus japonicus HOM05D000300 ORTHO05D000383 7.1e-10 67.0 62 51.6
Lj3g0005372 Lotus japonicus HOM05D000300 ORTHO05D000383 1.2e-09 66.2 63 50.8
Medtr8g465890 Medicago truncatula HOM05D000300 ORTHO05D000383 1.6e-09 65.9 73 43.8
CiPaw.03G176100 Carya illinoinensis HOM05D000300 ORTHO05D000383 2.1e-09 65.5 60 46.7
Psat5g271360 Pisum sativum HOM05D000300 ORTHO05D000383 2.1e-09 65.5 63 49.2
Aa31LG8G17610 Aethionema arabicum HOM05D000300 ORTHO05D000383 3.5e-09 64.7 62 48.4
TAR626G0522 Trochodendron aralioides HOM05D000300 ORTHO05D000383 3.5e-09 64.7 62 50.0
BcaC04g22782 Brassica carinata HOM05D000300 ORTHO05D000383 4.6e-09 64.3 62 48.4
BolC9t54442H Brassica oleracea HOM05D000300 ORTHO05D000383 4.6e-09 64.3 62 48.4
CSS0026918 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D000383 4.6e-09 64.3 75 45.3
ECA234G4398 Erigeron canadensis HOM05D000300 ORTHO05D000383 4.6e-09 64.3 63 46.0
Lj3g0023422 Lotus japonicus HOM05D000300 ORTHO05D000383 4.6e-09 64.3 63 49.2
TAR627G0683 Trochodendron aralioides HOM05D000300 ORTHO05D000383 6.0e-09 63.9 63 46.0
Thhalv10001972m.g Eutrema salsugineum HOM05D000300 ORTHO05D000383 7.8e-09 63.5 62 48.4
HanXRQChr10g0301231 Helianthus annuus HOM05D000300 ORTHO05D000383 7.8e-09 63.5 63 46.0
vmacro09279 Vaccinium macrocarpon HOM05D000300 ORTHO05D000383 7.8e-09 63.5 62 50.0
CSS0000289 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D000383 1.0e-08 63.2 63 49.2
CSS0011376 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D000383 1.0e-08 63.2 63 49.2
Potri.016G063300 Populus trichocarpa HOM05D000300 ORTHO05D000383 1.0e-08 63.2 62 50.0
TPR.G6420 Trifolium pratense HOM05D000300 ORTHO05D000383 1.0e-08 63.2 63 46.0
Aqoxy4G00874 Aquilegia oxysepala HOM05D000300 ORTHO05D000383 1.3e-08 62.8 63 49.2
TPR.G21759 Trifolium pratense HOM05D000300 ORTHO05D000383 1.7e-08 62.4 73 43.8
C09p15340 Brassica napus HOM05D000300 ORTHO05D000383 2.3e-08 62.0 62 46.8
Ca_01505_v3 Cicer arietinum L. HOM05D000300 ORTHO05D000383 2.3e-08 62.0 63 47.6
Medtr2g047855 Medicago truncatula HOM05D000300 ORTHO05D000383 2.3e-08 62.0 73 43.8
Lj3g0027073 Lotus japonicus HOM05D000300 ORTHO05D000383 3.0e-08 61.6 73 47.9
QL08p038541 Quercus lobata HOM05D000300 ORTHO05D000383 3.0e-08 61.6 60 46.7
vmacro09280 Vaccinium macrocarpon HOM05D000300 ORTHO05D000383 3.0e-08 61.6 62 48.4
Dinv26428 Davidia involucrata HOM05D000300 ORTHO05D000383 3.9e-08 61.2 63 50.8
Lj1A724G17 Lonicera japonica HOM05D000300 ORTHO05D000383 3.9e-08 61.2 63 47.6
Sabra16G0065700 Salix brachista HOM05D000300 ORTHO05D000383 3.9e-08 61.2 62 46.8
Aqoxy4G00922 Aquilegia oxysepala HOM05D000300 ORTHO05D000383 5.1e-08 60.8 63 46.0
CANSAT64G2932 Cannabis sativa HOM05D000300 ORTHO05D000383 5.1e-08 60.8 64 46.9
CiPaw.03G175900 Carya illinoinensis HOM05D000300 ORTHO05D000383 5.1e-08 60.8 59 45.8
MD05G1022100 Malus domestica HOM05D000300 ORTHO05D000383 5.1e-08 60.8 63 44.4
Medtr2g090290 Medicago truncatula HOM05D000300 ORTHO05D000383 5.1e-08 60.8 70 45.7
Aqoxy4G00891 Aquilegia oxysepala HOM05D000300 ORTHO05D000383 6.6e-08 60.5 63 49.2
CiPaw.03G176200 Carya illinoinensis HOM05D000300 ORTHO05D000383 6.6e-08 60.5 59 44.1
Dinv23647 Davidia involucrata HOM05D000300 ORTHO05D000383 6.6e-08 60.5 63 49.2
Actinidia39312 Actinidia chinensis HOM05D000300 ORTHO05D000383 8.7e-08 60.1 61 49.2
Aqoxy4G00888 Aquilegia oxysepala HOM05D000300 ORTHO05D000383 8.7e-08 60.1 74 45.9
Sp3g33960 Schrenkiella parvula HOM05D000300 ORTHO05D000383 8.7e-08 60.1 62 45.2
AL3G53800 Arabidopsis lyrata HOM05D000300 ORTHO05D000383 1.1e-07 59.7 62 46.8
Nn1g06575 Nelumbo nucifera HOM05D000300 ORTHO05D000383 1.1e-07 59.7 63 46.0
TWI77G0117 Tripterygium wilfordii HOM05D000300 ORTHO05D000383 1.1e-07 59.7 63 46.0
Atru.chr8.1237 Acer truncatum HOM05D000300 ORTHO05D000383 1.5e-07 59.3 63 46.0
CANSAT78G0733 Cannabis sativa HOM05D000300 ORTHO05D000383 1.5e-07 59.3 63 42.9
CiPaw.03G175700 Carya illinoinensis HOM05D000300 ORTHO05D000383 1.5e-07 59.3 59 42.4
Nitab4.5_0003942g0120 Nicotiana tabacum HOM05D000300 ORTHO05D000383 1.5e-07 59.3 64 46.9
VMungo1080G1438 Vigna mungo HOM05D000300 ORTHO05D000383 1.5e-07 59.3 63 50.8
A09p12950 Brassica napus HOM05D000300 ORTHO05D000383 1.9e-07 58.9 64 45.3
RcHm_v2.0_Chr3g0477861 Rosa chinensis HOM05D000300 ORTHO05D000383 1.9e-07 58.9 63 46.0
arahy.Tifrunner.gnm1.ann1.QZ522N Arachis hypogaea HOM05D000300 ORTHO05D000383 2.5e-07 58.5 63 42.9
BcaB07g31583 Brassica carinata HOM05D000300 ORTHO05D000383 2.5e-07 58.5 62 41.9
Carub.0003s3522 Capsella rubella HOM05D000300 ORTHO05D000383 2.5e-07 58.5 62 45.2
Nitab4.5_0010497g0010 Nicotiana tabacum HOM05D000300 ORTHO05D000383 2.5e-07 58.5 64 46.9
Phvul.005G104300 Phaseolus vulgaris HOM05D000300 ORTHO05D000383 2.5e-07 58.5 73 46.6
BraA09t36941Z Brassica rapa HOM05D000300 ORTHO05D000383 3.3e-07 58.2 62 43.5
HanXRQChr10g0301221 Helianthus annuus HOM05D000300 ORTHO05D000383 3.3e-07 58.2 63 44.4
Prupe.8G026200 Prunus persica HOM05D000300 ORTHO05D000383 3.3e-07 58.2 63 44.4
FvH4_6g21294 Fragaria vesca HOM05D000300 ORTHO05D000383 4.3e-07 57.8 63 47.6
FAN14G5747 Fragaria x ananassa HOM05D000300 ORTHO05D000383 4.3e-07 57.8 63 47.6
THA.LOC104824703 Tarenaya hassleriana HOM05D000300 ORTHO05D000383 4.3e-07 57.8 62 45.2
CSS0038961 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D000383 5.6e-07 57.4 57 49.1
CiPaw.10G022400 Carya illinoinensis HOM05D000300 ORTHO05D000383 5.6e-07 57.4 62 43.5
DCAR_013004 Daucus carota HOM05D000300 ORTHO05D000383 5.6e-07 57.4 62 43.5
TWI75G1717 Tripterygium wilfordii HOM05D000300 ORTHO05D000383 5.6e-07 57.4 61 37.7
Aqoxy4G00916 Aquilegia oxysepala HOM05D000300 ORTHO05D000383 7.3e-07 57.0 63 39.7
CARHR111350 Cardamine hirsuta HOM05D000300 ORTHO05D000383 7.3e-07 57.0 62 45.2
Cc05_g07070 Coffea canephora HOM05D000300 ORTHO05D000383 7.3e-07 57.0 65 46.2
RcHm_v2.0_Chr3g0477851 Rosa chinensis HOM05D000300 ORTHO05D000383 7.3e-07 57.0 63 44.4
Sed0023860 Sechium edule HOM05D000300 ORTHO05D000383 7.3e-07 57.0 63 44.4
TAR626G0888 Trochodendron aralioides HOM05D000300 ORTHO05D000383 7.3e-07 57.0 58 44.8
Rhsim04G0068200 Rhododendron simsii HOM05D000300 ORTHO05D000383 9.6e-07 56.6 61 42.6
RcHm_v2.0_Chr3g0477891 Rosa chinensis HOM05D000300 ORTHO05D000383 9.6e-07 56.6 63 46.0
Sed0022098 Sechium edule HOM05D000300 ORTHO05D000383 9.6e-07 56.6 63 41.3
Aqoxy4G00877 Aquilegia oxysepala HOM05D000300 ORTHO05D000383 1.2e-06 56.2 76 43.4
Aqoxy4G00881 Aquilegia oxysepala HOM05D000300 ORTHO05D000383 1.2e-06 56.2 73 39.7
AT2G20710 Arabidopsis thaliana HOM05D000300 ORTHO05D000383 1.2e-06 56.2 62 45.2
CSS0029523 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D000383 1.2e-06 56.2 64 45.3
FAN02G2749 Fragaria x ananassa HOM05D000300 ORTHO05D000383 1.2e-06 56.2 63 42.9
Glyma.12G203800 Glycine max HOM05D000300 ORTHO05D000383 1.2e-06 56.2 63 44.4
Manes.09G041100 Manihot esculenta HOM05D000300 ORTHO05D000383 1.2e-06 56.2 62 46.8
Prupe.3G136900 Prunus persica HOM05D000300 ORTHO05D000383 1.2e-06 56.2 63 41.3
Cpa.g.sc85.8 Carica papaya HOM05D000300 ORTHO05D000383 1.6e-06 55.8 62 41.9
ClCG07G002970 Citrullus lanatus HOM05D000300 ORTHO05D000383 1.6e-06 55.8 63 41.3
COL.COLO4_30181 Corchorus olitorius HOM05D000300 ORTHO05D000383 1.6e-06 55.8 63 39.7
Haze_13152 Corylus avellana HOM05D000300 ORTHO05D000383 1.6e-06 55.8 59 44.1
FvH4_6g21300 Fragaria vesca HOM05D000300 ORTHO05D000383 1.6e-06 55.8 63 44.4
FAN14G2203 Fragaria x ananassa HOM05D000300 ORTHO05D000383 1.6e-06 55.8 63 44.4
Atru.chr8.1235 Acer truncatum HOM05D000300 ORTHO05D000383 2.1e-06 55.5 63 44.4
Aqoxy4G00887 Aquilegia oxysepala HOM05D000300 ORTHO05D000383 2.1e-06 55.5 63 41.3
Cpa.g.sc34.152 Carica papaya HOM05D000300 ORTHO05D000383 2.1e-06 55.5 63 44.4
Lsat_1_v5_gn_4_65741 Lactuca sativa HOM05D000300 ORTHO05D000383 2.1e-06 55.5 66 39.4
Prupe.7G086900 Prunus persica HOM05D000300 ORTHO05D000383 2.1e-06 55.5 63 44.4
Rhsim04G0068100 Rhododendron simsii HOM05D000300 ORTHO05D000383 2.1e-06 55.5 61 42.6
CSS0038865 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D000383 2.8e-06 55.1 57 45.6
Lsat_1_v5_gn_4_65120 Lactuca sativa HOM05D000300 ORTHO05D000383 2.8e-06 55.1 63 44.4
PGR042G2580 Punica granatum HOM05D000300 ORTHO05D000383 2.8e-06 55.1 63 39.7
RcHm_v2.0_Chr6g0275941 Rosa chinensis HOM05D000300 ORTHO05D000383 2.8e-06 55.1 63 47.6
TAR626G0872 Trochodendron aralioides HOM05D000300 ORTHO05D000383 2.8e-06 55.1 63 39.7
Duzib132G0424 Durio zibethinus HOM05D000300 ORTHO05D000383 3.6e-06 54.7 63 39.7
Hma1.2p1_0881F.1_g232100 Hydrangea macrophylla HOM05D000300 ORTHO05D000383 3.6e-06 54.7 64 45.3
TWI75G0593 Tripterygium wilfordii HOM05D000300 ORTHO05D000383 3.6e-06 54.7 61 37.7
arahy.Tifrunner.gnm1.ann1.CVI481 Arachis hypogaea HOM05D000300 ORTHO05D000383 4.7e-06 54.3 63 39.7
Sabra13G0111900 Salix brachista HOM05D000300 ORTHO05D000383 4.7e-06 54.3 62 45.2
Actinidia09858 Actinidia chinensis HOM05D000300 ORTHO05D000383 6.2e-06 53.9 56 50.0
Dinv26429 Davidia involucrata HOM05D000300 ORTHO05D000383 6.2e-06 53.9 63 41.3
Manes.12G084500 Manihot esculenta HOM05D000300 ORTHO05D000383 6.2e-06 53.9 62 41.9
VMungo1080G1598 Vigna mungo HOM05D000300 ORTHO05D000383 6.2e-06 53.9 67 46.3
Glyma.13G297800 Glycine max HOM05D000300 ORTHO05D000383 8.1e-06 53.5 63 42.9
MD17G1241400 Malus domestica HOM05D000300 ORTHO05D000383 8.1e-06 53.5 63 42.9
vmacro07531 Vaccinium macrocarpon HOM05D000300 ORTHO05D000383 8.1e-06 53.5 62 45.2


User provided reference genes

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