Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.H4389H Arachis hypogaea HOM05D003892 ORTHO05D004522 0.0e+00 1267.7 656 100.0
arahy.Tifrunner.gnm1.ann1.P5VIE6 Arachis hypogaea HOM05D003892 ORTHO05D004522 3.1e-311 1071.2 656 87.3
Lj1g0007585 Lotus japonicus HOM05D003892 ORTHO05D004522 8.0e-235 817.4 658 67.6
Lalb_Chr01g0017711 Lupinus albus HOM05D003892 ORTHO05D004522 4.7e-227 791.6 673 66.4
Lalb_Chr25g0287841 Lupinus albus HOM05D003892 ORTHO05D004522 4.1e-223 778.5 663 65.3
Glyma.03G205000 Glycine max HOM05D003892 ORTHO05D004522 7.8e-222 774.2 658 66.1
TPR.G34451 Trifolium pratense HOM05D003892 ORTHO05D004522 3.3e-220 768.8 656 64.5
Glyma.19G202400 Glycine max HOM05D003892 ORTHO05D004522 5.6e-220 768.1 657 65.6
Ca_09081_v3 Cicer arietinum L. HOM05D003892 ORTHO05D004522 2.1e-219 766.1 656 64.8
Medtr7g106900 Medicago truncatula HOM05D003892 ORTHO05D004522 4.0e-218 761.9 656 64.8
Psat3g027080 Pisum sativum HOM05D003892 ORTHO05D004522 6.8e-218 761.1 656 64.8
arahy.Tifrunner.gnm1.ann1.IGZ3F9 Arachis hypogaea HOM05D003892 ORTHO05D004522 8.6e-213 744.2 636 63.5
Lj6g0017825 Lotus japonicus HOM05D003892 ORTHO05D004522 4.7e-211 738.4 631 64.8
Phvul.001G198500 Phaseolus vulgaris HOM05D003892 ORTHO05D004522 5.8e-209 731.5 658 63.5
arahy.Tifrunner.gnm1.ann1.L9LT45 Arachis hypogaea HOM05D003892 ORTHO05D004522 4.3e-204 715.3 671 60.4
VMungo1383G0340 Vigna mungo HOM05D003892 ORTHO05D004522 3.2e-199 699.1 660 62.1
QL07p026283 Quercus lobata HOM05D003892 ORTHO05D004522 2.4e-191 672.9 672 57.1
Cfa017615 Carpinus fangiana HOM05D003892 ORTHO05D004522 6.9e-186 654.8 669 56.2
Potri.016G065600 Populus trichocarpa HOM05D003892 ORTHO05D004522 4.2e-183 645.6 674 56.7
Manes.08G037500 Manihot esculenta HOM05D003892 ORTHO05D004522 8.7e-181 637.9 668 55.5
CiPaw.10G021500 Carya illinoinensis HOM05D003892 ORTHO05D004522 2.5e-180 636.3 672 55.1
GSVIVG01015854001 Vitis vinifera HOM05D003892 ORTHO05D004522 2.4e-178 629.8 670 54.0
Thecc.05G110400 Theobroma cacao HOM05D003892 ORTHO05D004522 2.7e-174 616.3 671 54.4
COL.COLO4_29492 Corchorus olitorius HOM05D003892 ORTHO05D004522 3.5e-174 615.9 669 53.2
Potri.006G199200 Populus trichocarpa HOM05D003892 ORTHO05D004522 1.5e-172 610.5 669 54.0
TWI15G0645 Tripterygium wilfordii HOM05D003892 ORTHO05D004522 3.3e-172 609.4 671 54.8
Duzib106G1451 Durio zibethinus HOM05D003892 ORTHO05D004522 4.8e-171 605.5 672 53.9
TAR633G1336 Trochodendron aralioides HOM05D003892 ORTHO05D004522 1.5e-169 600.5 673 53.3
Ciclev10011278m.g Citrus clementina HOM05D003892 ORTHO05D004522 3.4e-169 599.4 672 53.3
Haze_20130 Corylus avellana HOM05D003892 ORTHO05D004522 5.8e-169 598.6 731 50.2
Duzib128G1914 Durio zibethinus HOM05D003892 ORTHO05D004522 4.6e-166 589.0 673 53.2
Prupe.7G089700 Prunus persica HOM05D003892 ORTHO05D004522 1.3e-165 587.4 669 52.5
CANSAT64G1569 Cannabis sativa HOM05D003892 ORTHO05D004522 4.3e-164 582.4 670 51.5
Atru.chr8.1281 Acer truncatum HOM05D003892 ORTHO05D004522 7.4e-164 581.6 698 50.6
Gohir.D04G093300 Gossypium hirsutum HOM05D003892 ORTHO05D004522 2.1e-163 580.1 672 53.1
Sed0022353 Sechium edule HOM05D003892 ORTHO05D004522 2.1e-163 580.1 664 52.6
Gorai.009G395500 Gossypium raimondii HOM05D003892 ORTHO05D004522 3.7e-163 579.3 672 53.0
Actinidia03963 Actinidia chinensis HOM05D003892 ORTHO05D004522 8.2e-163 578.2 695 49.2
ClCG10G017850 Citrullus lanatus HOM05D003892 ORTHO05D004522 1.8e-162 577.0 665 51.4
CSS0037074 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 2.0e-161 573.5 679 50.1
Hma1.2p1_0304F.1_g119340 Hydrangea macrophylla HOM05D003892 ORTHO05D004522 1.4e-159 567.4 674 50.0
Nn2g14423 Nelumbo nucifera HOM05D003892 ORTHO05D004522 2.3e-157 560.1 677 50.5
Sabra16G0067100 Salix brachista HOM05D003892 ORTHO05D004522 5.1e-157 558.9 674 51.5
Sabra06G0153100 Salix brachista HOM05D003892 ORTHO05D004522 9.7e-156 554.7 668 51.5
Gorai.002G233300 Gossypium raimondii HOM05D003892 ORTHO05D004522 8.2e-155 551.6 672 50.6
Eucgr.A02543 Eucalyptus grandis HOM05D003892 ORTHO05D004522 1.1e-154 551.2 680 49.7
Gohir.D01G189600 Gossypium hirsutum HOM05D003892 ORTHO05D004522 1.4e-154 550.8 672 50.6
MELO3C009588.2 Cucumis melo HOM05D003892 ORTHO05D004522 4.1e-154 549.3 668 49.9
MD14G1044900 Malus domestica HOM05D003892 ORTHO05D004522 9.0e-154 548.1 669 49.9
Lj1C1061G1 Lonicera japonica HOM05D003892 ORTHO05D004522 2.6e-153 546.6 667 49.3
CsaV3_3G038440 Cucumis sativus L. HOM05D003892 ORTHO05D004522 5.9e-153 545.4 668 49.9
Gohir.A01G199500 Gossypium hirsutum HOM05D003892 ORTHO05D004522 5.9e-153 545.4 672 50.3
MD12G1046200 Malus domestica HOM05D003892 ORTHO05D004522 1.0e-152 544.7 665 49.8
Rhsim03G0058500 Rhododendron simsii HOM05D003892 ORTHO05D004522 1.3e-152 544.3 682 48.5
FAN05G2923 Fragaria x ananassa HOM05D003892 ORTHO05D004522 2.7e-150 536.6 668 49.4
RcHm_v2.0_Chr3g0477411 Rosa chinensis HOM05D003892 ORTHO05D004522 3.1e-146 523.1 660 49.2
FAN02G1525 Fragaria x ananassa HOM05D003892 ORTHO05D004522 1.2e-145 521.2 668 48.7
PGR004G2391 Punica granatum HOM05D003892 ORTHO05D004522 7.7e-145 518.5 666 49.1
FAN05G3327 Fragaria x ananassa HOM05D003892 ORTHO05D004522 1.1e-143 514.6 699 46.8
DCAR_013462 Daucus carota HOM05D003892 ORTHO05D004522 5.5e-143 512.3 675 47.0
EL10Ac5g11803 Beta vulgaris HOM05D003892 ORTHO05D004522 2.1e-142 510.4 676 48.7
Sc22g0003030 Simmondsia chinensis HOM05D003892 ORTHO05D004522 2.7e-142 510.0 668 47.3
THA.LOC104825242 Tarenaya hassleriana HOM05D003892 ORTHO05D004522 1.8e-141 507.3 672 46.9
AUR62038416 Chenopodium quinoa HOM05D003892 ORTHO05D004522 3.0e-141 506.5 677 47.1
FAN14G4612 Fragaria x ananassa HOM05D003892 ORTHO05D004522 6.7e-141 505.4 699 46.2
Aqoxy2G02397 Aquilegia oxysepala HOM05D003892 ORTHO05D004522 6.3e-139 498.8 677 45.5
AUR62036307 Chenopodium quinoa HOM05D003892 ORTHO05D004522 6.3e-139 498.8 675 47.3
Solyc01g006700.3 Solanum lycopersicum HOM05D003892 ORTHO05D004522 7.0e-138 495.4 673 46.4
Sopen01g002690 Solanum pennellii HOM05D003892 ORTHO05D004522 7.0e-138 495.4 644 47.8
Aqoxy1G00583 Aquilegia oxysepala HOM05D003892 ORTHO05D004522 1.5e-137 494.2 678 46.0
THA.LOC104824220 Tarenaya hassleriana HOM05D003892 ORTHO05D004522 6.5e-136 488.8 673 46.7
HanXRQChr13g0398781 Helianthus annuus HOM05D003892 ORTHO05D004522 8.5e-136 488.4 672 46.4
TWI81G0594 Tripterygium wilfordii HOM05D003892 ORTHO05D004522 1.1e-135 488.0 536 53.9
ECA233G3816 Erigeron canadensis HOM05D003892 ORTHO05D004522 3.2e-135 486.5 639 46.9
AL5G35820 Arabidopsis lyrata HOM05D003892 ORTHO05D004522 5.5e-135 485.7 647 46.4
Sp5g07700 Schrenkiella parvula HOM05D003892 ORTHO05D004522 9.4e-135 485.0 677 46.5
Hund10790 Selenicereus undatus HOM05D003892 ORTHO05D004522 9.4e-135 485.0 670 47.3
PGSC0003DMG400021344 Solanum tuberosum HOM05D003892 ORTHO05D004522 1.6e-134 484.2 674 45.7
HanXRQChr02g0052851 Helianthus annuus HOM05D003892 ORTHO05D004522 2.7e-134 483.4 671 47.5
A09p47680 Brassica napus HOM05D003892 ORTHO05D004522 4.7e-134 482.6 667 44.8
Cc06_g06980 Coffea canephora HOM05D003892 ORTHO05D004522 4.7e-134 482.6 676 45.1
Thhalv10010226m.g Eutrema salsugineum HOM05D003892 ORTHO05D004522 8.0e-134 481.9 654 46.3
Oeu058130.1 Olea europaea HOM05D003892 ORTHO05D004522 1.4e-133 481.1 728 43.0
CAN.G388.52 Capsicum annuum HOM05D003892 ORTHO05D004522 2.3e-133 480.3 682 45.7
BraA09t40224Z Brassica rapa HOM05D003892 ORTHO05D004522 5.2e-133 479.2 667 44.8
Aa31LG11G3840 Aethionema arabicum HOM05D003892 ORTHO05D004522 1.1e-132 478.0 674 46.6
Dinv25081 Davidia involucrata HOM05D003892 ORTHO05D004522 4.4e-132 476.1 538 53.0
BcaB01g00163 Brassica carinata HOM05D003892 ORTHO05D004522 7.4e-132 475.3 701 43.7
Medtr7g029625 Medicago truncatula HOM05D003892 ORTHO05D004522 9.7e-132 474.9 668 49.1
AT3G54750 Arabidopsis thaliana HOM05D003892 ORTHO05D004522 1.3e-131 474.6 645 45.1
PSO210G1032 Papaver somniferum HOM05D003892 ORTHO05D004522 2.8e-131 473.4 683 45.1
Carub.0005s2135 Capsella rubella HOM05D003892 ORTHO05D004522 4.8e-131 472.6 670 45.2
MBI11_g43834_MAGBIO Magnolia biondii HOM05D003892 ORTHO05D004522 1.8e-130 470.7 675 45.6
PSO832G2838 Papaver somniferum HOM05D003892 ORTHO05D004522 2.6e-129 466.8 680 44.6
BolC8t50600H Brassica oleracea HOM05D003892 ORTHO05D004522 6.5e-128 462.2 668 43.9
Ah.12g059580 Amaranthus hybridus HOM05D003892 ORTHO05D004522 1.1e-127 461.5 666 45.3
CARHR164690 Cardamine hirsuta HOM05D003892 ORTHO05D004522 1.5e-127 461.1 663 43.7
SalBow1G1519 Salvia bowleyana HOM05D003892 ORTHO05D004522 1.5e-127 461.1 672 43.8
BcaC07g39789 Brassica carinata HOM05D003892 ORTHO05D004522 3.2e-127 459.9 668 43.6
Sed0022528 Sechium edule HOM05D003892 ORTHO05D004522 3.2e-127 459.9 664 46.2
BcaB02g08458 Brassica carinata HOM05D003892 ORTHO05D004522 5.5e-127 459.1 647 44.7
SalBow1G7123 Salvia bowleyana HOM05D003892 ORTHO05D004522 9.4e-127 458.4 672 43.5
FvH4_6g21040 Fragaria vesca HOM05D003892 ORTHO05D004522 3.6e-126 456.4 601 47.9
MSTRG.5909 Avicennia marina HOM05D003892 ORTHO05D004522 5.7e-124 449.1 672 42.9
TAR636G2427 Trochodendron aralioides HOM05D003892 ORTHO05D004522 7.5e-124 448.7 397 60.7
Migut.J00728 Erythranthe guttata HOM05D003892 ORTHO05D004522 4.8e-123 446.0 665 42.4
HPP92_013933 Vanilla planifolia HOM05D003892 ORTHO05D004522 4.8e-123 446.0 674 43.9
BraA04t16218Z Brassica rapa HOM05D003892 ORTHO05D004522 2.4e-122 443.7 647 43.9
A04p05070 Brassica napus HOM05D003892 ORTHO05D004522 4.1e-122 443.0 647 44.4
arahy.Tifrunner.gnm1.ann1.75SLRD Arachis hypogaea HOM05D003892 ORTHO05D004522 9.1e-122 441.8 246 92.3
Nitab4.5_0003430g0010 Nicotiana tabacum HOM05D003892 ORTHO05D004522 9.1e-122 441.8 682 43.0
C08p29890 Brassica napus HOM05D003892 ORTHO05D004522 1.2e-121 441.4 667 42.4
SGA_v2.0_scaffold31G12827 Striga asiatica HOM05D003892 ORTHO05D004522 1.0e-120 438.3 669 43.2
BcaC02g09701 Brassica carinata HOM05D003892 ORTHO05D004522 5.0e-120 436.0 647 43.7
ECA238G3852 Erigeron canadensis HOM05D003892 ORTHO05D004522 1.2e-118 431.4 632 43.2
C04p37570 Brassica napus HOM05D003892 ORTHO05D004522 1.6e-118 431.0 647 43.6
Lsat_1_v5_gn_6_34240 Lactuca sativa HOM05D003892 ORTHO05D004522 3.6e-118 429.9 675 42.4
SGA_v2.0_scaffold112G31566 Striga asiatica HOM05D003892 ORTHO05D004522 4.0e-117 426.4 675 42.1
Cpa.g.sc222.13 Carica papaya HOM05D003892 ORTHO05D004522 1.1e-114 418.3 598 44.6
CDE07G1113 Ceratophyllum demersum HOM05D003892 ORTHO05D004522 5.4e-114 416.0 661 42.7
Os12g0621700 Oryza sativa ssp. japonica HOM05D003892 ORTHO05D004522 5.9e-113 412.5 639 42.4
Peaxi162Scf00751g00063 Petunia axillaris HOM05D003892 ORTHO05D004522 3.0e-109 400.2 680 41.2
Peaxi162Scf00210g00093 Petunia axillaris HOM05D003892 ORTHO05D004522 4.0e-109 399.8 680 41.2
Aa31LG2G20030 Aethionema arabicum HOM05D003892 ORTHO05D004522 3.7e-107 393.3 494 49.0
Zm00001eb032200 Zea mays HOM05D003892 ORTHO05D004522 3.7e-107 393.3 672 41.8
ATR0580G241 Amborella trichopoda HOM05D003892 ORTHO05D004522 7.8e-105 385.6 647 40.6
Dinv11899 Davidia involucrata HOM05D003892 ORTHO05D004522 1.5e-103 381.3 446 52.0
Lsat_1_v5_gn_2_121661 Lactuca sativa HOM05D003892 ORTHO05D004522 6.1e-102 375.9 652 39.9
Gohir.A04G055942 Gossypium hirsutum HOM05D003892 ORTHO05D004522 4.4e-100 369.8 327 60.6
MBI11_g33439_MAGBIO Magnolia biondii HOM05D003892 ORTHO05D004522 4.3e-95 353.2 364 55.8
GSVIVG01020969001 Vitis vinifera HOM05D003892 ORTHO05D004522 4.1e-90 336.7 406 51.2
Actinidia37779 Actinidia chinensis HOM05D003892 ORTHO05D004522 6.8e-85 319.3 253 62.8
Sed0005279 Sechium edule HOM05D000521 ORTHO05D004522 4.1e-82 310.1 425 46.1
Nitab4.5_0000300g0030 Nicotiana tabacum HOM05D003892 ORTHO05D004522 6.6e-80 302.8 527 40.8
CSS0004478 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 1.2e-76 292.0 416 45.7
vmacro07513 Vaccinium macrocarpon HOM05D003892 ORTHO05D004522 5.6e-71 273.1 355 47.9
Pp3c26_8020 Physcomitrium patens HOM05D003892 ORTHO05D004522 1.5e-68 265.0 432 38.4
arahy.Tifrunner.gnm1.ann1.C1NY7P Arachis hypogaea HOM05D003892 ORTHO05D004522 1.3e-67 261.9 327 48.3
arahy.Tifrunner.gnm1.ann1.R2HNIM Arachis hypogaea HOM05D003892 ORTHO05D004522 1.1e-66 258.8 299 51.2
Pp3c4_31220 Physcomitrium patens HOM05D003892 ORTHO05D004522 1.0e-64 252.3 444 37.8
Gohir.D07G211433 Gossypium hirsutum HOM05D003892 ORTHO05D004522 5.1e-64 250.0 444 42.1
arahy.Tifrunner.gnm1.ann1.84GXZP Arachis hypogaea HOM05D003892 ORTHO05D004522 3.3e-63 247.3 331 47.7
SMO351G0585 Selaginella moellendorffii HOM05D003892 ORTHO05D004522 1.4e-61 241.9 640 33.8
Cfa017831 Carpinus fangiana HOM05D003892 ORTHO05D004522 9.9e-60 235.7 227 56.4
Mapoly0011s0047 Marchantia polymorpha HOM05D003892 ORTHO05D004522 3.5e-57 227.3 680 31.5
SHI28320 Sapria himalayana HOM05D003892 ORTHO05D004522 7.9e-57 226.1 640 33.0
AagrBONN_evm.TU.Sc2ySwM_228.3493 Anthoceros agrestis HOM05D003892 ORTHO05D004522 6.7e-56 223.0 435 35.4
unitig_749.g14208 Utricularia gibba HOM05D003892 ORTHO05D004522 9.6e-55 219.2 240 49.2
unitig_26.g9151 Utricularia gibba HOM05D003892 ORTHO05D004522 2.2e-51 208.0 246 45.9
Nitab4.5_0000429g0010 Nicotiana tabacum HOM05D003892 ORTHO05D004522 7.1e-50 203.0 320 42.5
Gohir.A04G055921 Gossypium hirsutum HOM05D003892 ORTHO05D004522 2.1e-46 191.4 300 45.7
vmacro07512 Vaccinium macrocarpon HOM05D003892 ORTHO05D004522 2.7e-41 174.5 289 43.9
GSVIVG01020973001 Vitis vinifera HOM05D003892 ORTHO05D004522 2.7e-41 174.5 236 44.5
arahy.Tifrunner.gnm1.ann1.Z2YKN3 Arachis hypogaea HOM05D003892 ORTHO05D004522 4.3e-39 167.2 251 43.0
CSS0016552 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 9.7e-39 166.0 182 51.1
CBR_g20103 Chara braunii HOM05D003892 ORTHO05D004522 1.2e-33 149.1 558 27.1
arahy.Tifrunner.gnm1.ann1.U7JCXR Arachis hypogaea HOM05D003892 ORTHO05D004522 2.7e-33 147.9 226 42.5
GSVIVG01020966001 Vitis vinifera HOM05D003892 ORTHO05D004522 4.6e-33 147.1 95 75.8
HPP92_012152 Vanilla planifolia HOM05D003892 ORTHO05D004522 3.3e-31 141.0 135 52.6
arahy.Tifrunner.gnm1.ann1.RB1WVK Arachis hypogaea HOM05D003892 ORTHO05D004522 7.4e-31 139.8 239 40.2
Aqoxy2G02169 Aquilegia oxysepala HOM05D001785 ORTHO05D001933 2.6e-23 114.8 329 32.2
Nitab4.5_0003430g0040 Nicotiana tabacum HOM05D003892 ORTHO05D004522 2.4e-21 108.2 251 35.1
TAR636G1189 Trochodendron aralioides HOM05D003892 ORTHO05D004522 2.2e-19 101.7 232 37.1
Actinidia37778 Actinidia chinensis HOM05D003892 ORTHO05D004522 1.8e-16 92.0 283 31.8
Glyma.10G214400 Glycine max HOM05D003892 ORTHO05D004522 3.0e-16 91.3 201 34.8
Sabra17G0067200 Salix brachista HOM05D003892 ORTHO05D004522 3.0e-16 91.3 88 55.7
arahy.Tifrunner.gnm1.ann1.JYC2GZ Arachis hypogaea HOM05D003892 ORTHO05D082817 5.2e-16 90.5 48 89.6
SEGI_25684 Sequoiadendron giganteum HOM05D003892 ORTHO05D004522 8.8e-16 89.7 302 30.8
SEGI_30208 Sequoiadendron giganteum HOM05D003892 ORTHO05D004522 1.1e-15 89.4 73 56.2
Cre03.g197600 Chlamydomonas reinhardtii HOM05D003892 ORTHO05D004522 5.9e-12 77.0 482 25.3
Ah.02g116070 Amaranthus hybridus HOM05D003892 ORTHO05D004522 5.0e-11 73.9 91 45.1
ATR1154G016 Amborella trichopoda HOM05D003892 ORTHO05D004522 1.9e-10 72.0 99 42.4
GSVIVG01022517001 Vitis vinifera HOM05D003892 ORTHO05D004522 9.8e-07 59.7 72 44.4


User provided reference genes

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