Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.H38MEV Arachis hypogaea HOM05D000963 ORTHO05D010073 1.7e-122 442.6 211 100.0
Sed0028031 Sechium edule HOM05D000963 ORTHO05D010073 9.8e-102 373.6 218 85.8
Sed0001563 Sechium edule HOM05D000963 ORTHO05D010073 1.0e-98 363.6 202 89.1
arahy.Tifrunner.gnm1.ann1.0FXL97 Arachis hypogaea HOM05D000963 ORTHO05D010073 7.5e-94 347.4 162 100.0
arahy.Tifrunner.gnm1.ann1.WPV0UJ Arachis hypogaea HOM05D000963 ORTHO05D010073 1.9e-92 342.8 162 98.8
CDE02G3457 Ceratophyllum demersum HOM05D000963 ORTHO05D010073 1.6e-91 339.7 162 98.1
FAN13G1378 Fragaria x ananassa HOM05D000963 ORTHO05D010073 9.5e-89 330.5 187 86.1
arahy.Tifrunner.gnm1.ann1.F7VFKS Arachis hypogaea HOM05D000963 ORTHO05D010073 1.1e-87 327.0 206 79.1
QL10p017078 Quercus lobata HOM05D000963 ORTHO05D010073 9.9e-86 320.5 152 98.0
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 1.7e-77 293.1 150 93.3
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 4.9e-77 291.6 150 92.7
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.3e-74 283.5 137 96.4
arahy.Tifrunner.gnm1.ann1.LW54SX Arachis hypogaea HOM05D000963 ORTHO05D010073 3.0e-74 282.3 187 75.9
Lsat_1_v5_gn_0_47661 Lactuca sativa HOM05D000963 ORTHO05D010073 9.6e-73 277.3 191 74.9
Lsat_1_v5_gn_2_97101 Lactuca sativa HOM05D000963 ORTHO05D010073 9.6e-73 277.3 191 74.9
Lsat_1_v5_gn_8_139860 Lactuca sativa HOM05D000963 ORTHO05D010073 9.6e-73 277.3 191 74.9
arahy.Tifrunner.gnm1.ann1.3JL12K Arachis hypogaea HOM05D000963 ORTHO05D010073 1.2e-70 270.4 181 75.7
arahy.Tifrunner.gnm1.ann1.9ZA4TL Arachis hypogaea HOM05D000963 ORTHO05D010073 1.2e-70 270.4 181 75.7
arahy.Tifrunner.gnm1.ann1.MCAP06 Arachis hypogaea HOM05D000963 ORTHO05D010073 1.2e-70 270.4 181 75.7
arahy.Tifrunner.gnm1.ann1.IG3D37 Arachis hypogaea HOM05D000963 ORTHO05D010073 3.8e-69 265.4 198 70.2
Lsat_1_v5_gn_6_94240 Lactuca sativa HOM05D000963 ORTHO05D010073 1.7e-66 256.5 206 67.0
SEGI_39281 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 3.9e-66 255.4 139 89.9
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.9e-61 238.4 137 83.9
DCAR_001521 Daucus carota HOM05D000963 ORTHO05D010073 3.3e-57 225.7 110 96.4
Sc21g0003830 Simmondsia chinensis HOM05D000963 ORTHO05D013492 1.7e-53 213.4 154 70.1
FAN01G1778 Fragaria x ananassa HOM05D000963 ORTHO05D010073 1.4e-52 210.3 119 84.0
FAN06G1734 Fragaria x ananassa HOM05D000963 ORTHO05D010073 6.0e-51 204.9 110 88.2
Sc09g0006440 Simmondsia chinensis HOM05D000963 ORTHO05D010073 2.3e-50 203.0 110 87.3
arahy.Tifrunner.gnm1.ann1.AKG7GD Arachis hypogaea HOM05D000963 ORTHO05D010073 1.1e-49 200.7 147 70.7
arahy.Tifrunner.gnm1.ann1.V5YKW3 Arachis hypogaea HOM05D000963 ORTHO05D010073 1.1e-49 200.7 147 70.7
FAN20G2381 Fragaria x ananassa HOM05D000963 ORTHO05D010073 1.4e-47 193.7 93 96.8
unitig_91.g26521 Utricularia gibba HOM05D000963 ORTHO05D010201 1.8e-47 193.4 89 98.9
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 3.5e-43 179.1 91 91.2
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 3.5e-43 179.1 143 68.5
arahy.Tifrunner.gnm1.ann1.FXQ5AB Arachis hypogaea HOM05D000963 ORTHO05D010073 3.9e-42 175.6 174 59.2
arahy.Tifrunner.gnm1.ann1.BP3EV9 Arachis hypogaea HOM05D000963 ORTHO05D010073 1.5e-41 173.7 138 65.2
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 1.4e-39 167.2 141 65.2
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.5e-38 163.7 96 81.2
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.5e-38 163.7 96 81.2
Sopen10g016580 Solanum pennellii HOM05D000963 ORTHO05D010073 2.5e-36 156.4 146 59.6
Actinidia28233 Actinidia chinensis HOM05D000963 ORTHO05D010073 6.7e-34 148.3 69 95.7
arahy.Tifrunner.gnm1.ann1.L8KA6F Arachis hypogaea HOM05D000963 ORTHO05D010073 1.1e-33 147.5 73 89.0
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 7.7e-30 134.8 88 76.1
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 3.8e-29 132.5 62 98.4
Medtr4g451295 Medicago truncatula HOM05D000963 ORTHO05D010073 1.4e-28 130.6 61 98.4
Oeu029257.1 Olea europaea HOM05D000963 ORTHO05D010073 1.4e-28 130.6 130 55.4
Hma1.2p1_0431F.1_g151580 Hydrangea macrophylla HOM05D000963 ORTHO05D010073 2.5e-28 129.8 127 59.1
Oeu010687.1 Olea europaea HOM05D000963 ORTHO05D010073 6.1e-27 125.2 78 75.6
arahy.Tifrunner.gnm1.ann1.W1SKJ5 Arachis hypogaea HOM05D000963 ORTHO05D013225 7.9e-27 124.8 57 100.0
Gohir.A12G138580 Gossypium hirsutum HOM05D000963 ORTHO05D010073 1.8e-26 123.6 64 89.1
Cpa.g.sc163.10 Carica papaya HOM05D000963 ORTHO05D010073 1.5e-25 120.6 60 95.0
Gorai.011G106300 Gossypium raimondii HOM05D000963 ORTHO05D010073 4.4e-25 119.0 62 87.1
Gohir.A04G039240 Gossypium hirsutum HOM05D000963 ORTHO05D010073 2.8e-24 116.3 53 100.0
SEGI_18787 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 6.3e-24 115.2 89 70.8
Gohir.1Z056500 Gossypium hirsutum HOM05D000963 ORTHO05D010073 8.2e-24 114.8 53 98.1
Sopen11g020210 Solanum pennellii HOM05D000963 ORTHO05D013225 8.2e-24 114.8 93 65.6
SEGI_01254 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 9.1e-23 111.3 88 63.6
Sopen05g013060 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-21 107.8 53 92.5
EL10Ac4g08799 Beta vulgaris HOM05D000963 ORTHO05D010073 2.2e-21 106.7 54 88.9
SalBow1G2814 Salvia bowleyana HOM05D000963 ORTHO05D004715 3.2e-20 102.8 65 75.4
SalBow1G5969 Salvia bowleyana HOM05D000963 ORTHO05D004715 3.2e-20 102.8 65 75.4
Gohir.D04G096660 Gossypium hirsutum HOM05D000963 ORTHO05D010073 7.2e-20 101.7 53 86.8
unitig_91.g26526 Utricularia gibba HOM05D000963 ORTHO05D010073 9.4e-20 101.3 55 90.9
Gorai.009G238500 Gossypium raimondii HOM05D000963 ORTHO05D010073 1.6e-19 100.5 55 83.6
Gorai.007G326100 Gossypium raimondii HOM05D000963 ORTHO05D010073 1.0e-18 97.8 68 73.5
arahy.Tifrunner.gnm1.ann1.RD3GDK Arachis hypogaea HOM05D000963 ORTHO05D010073 3.0e-18 96.3 45 93.3
Gohir.1Z049892 Gossypium hirsutum HOM05D000963 ORTHO05D010073 4.0e-18 95.9 42 100.0
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 4.0e-18 95.9 52 80.8
SEGI_23954 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 8.8e-18 94.7 138 50.0
Phvul.008G179700 Phaseolus vulgaris HOM05D000963 ORTHO05D010073 1.5e-17 94.0 44 95.5
SEGI_06644 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 1.5e-17 94.0 138 48.6
SEGI_13999 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 1.5e-17 94.0 138 48.6
SEGI_16475 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 1.5e-17 94.0 138 48.6
LjContig00319g0016523 Lotus japonicus HOM05D000963 ORTHO05D010073 3.1e-15 86.3 72 63.9
SGA_v2.0_scaffold222G42797 Striga asiatica HOM05D000963 ORTHO05D010073 2.0e-14 83.6 102 49.0
AL1G35170 Arabidopsis lyrata HOM05D007117 ORTHO05D000038 4.5e-14 82.4 41 90.2
Medtr4g006070 Medicago truncatula HOM05D000963 ORTHO05D010073 4.5e-14 82.4 63 63.5
arahy.Tifrunner.gnm1.ann1.NMB5YK Arachis hypogaea HOM05D000963 ORTHO05D004715 5.9e-14 82.0 40 100.0
SEGI_38700 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 2.9e-13 79.7 117 46.2
arahy.Tifrunner.gnm1.ann1.D65SDJ Arachis hypogaea HOM05D000216 ORTHO05D031495 6.5e-13 78.6 40 97.5
Psat3g011600 Pisum sativum HOM05D000963 ORTHO05D010073 1.5e-12 77.4 38 86.8
Medtr4g076920 Medicago truncatula HOM05D008922 ORTHO05D010978 1.9e-12 77.0 34 100.0
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 2.5e-12 76.6 40 95.0
arahy.Tifrunner.gnm1.ann1.AT0L4S Arachis hypogaea HOM05D000963 ORTHO05D031495 3.2e-12 76.3 40 90.0
arahy.Tifrunner.gnm1.ann1.Q2LPLX Arachis hypogaea HOM05D009256 ORTHO05D011704 4.2e-12 75.9 63 63.5
arahy.Tifrunner.gnm1.ann1.V5LEJ9 Arachis hypogaea HOM05D009256 ORTHO05D011704 4.2e-12 75.9 63 63.5
arahy.Tifrunner.gnm1.ann1.QZF0BL Arachis hypogaea HOM05D009256 ORTHO05D011704 9.4e-12 74.7 95 49.5
Nitab4.5_0006727g0010 Nicotiana tabacum HOM05D000963 ORTHO05D010073 2.1e-11 73.6 79 51.9
Sopen08g015170 Solanum pennellii HOM05D000963 ORTHO05D031495 2.1e-11 73.6 40 90.0
arahy.Tifrunner.gnm1.ann1.WH3GKX Arachis hypogaea HOM05D009256 ORTHO05D011704 1.0e-10 71.2 56 66.1
TPR.G11370 Trifolium pratense HOM05D009256 ORTHO05D011704 1.0e-10 71.2 56 66.1
TAR629G1300 Trochodendron aralioides HOM05D009256 ORTHO05D011704 1.0e-10 71.2 56 66.1
FAN08G1097 Fragaria x ananassa HOM05D009256 ORTHO05D011704 4.0e-10 69.3 56 62.5
Nitab4.5_0007400g0110 Nicotiana tabacum HOM05D000963 ORTHO05D010073 4.0e-10 69.3 37 83.8
Medtr4g091430 Medicago truncatula HOM05D009256 ORTHO05D011704 5.2e-10 68.9 93 49.5
Oeu048363.1 Olea europaea HOM05D000963 ORTHO05D018542 1.2e-09 67.8 45 68.9
BNapus_Darmor_BZH_scaffold_234p00110 Brassica napus HOM05D009256 ORTHO05D011704 1.5e-09 67.4 56 64.3
BraSC77t46657Z Brassica rapa HOM05D009256 ORTHO05D011704 1.5e-09 67.4 56 64.3
Gorai.011G264900 Gossypium raimondii HOM05D000963 ORTHO05D010073 2.0e-09 67.0 32 87.5
arahy.Tifrunner.gnm1.ann1.EF1F4B Arachis hypogaea HOM05D000963 ORTHO05D010073 2.6e-09 66.6 69 50.7
Sopen10g009710 Solanum pennellii HOM05D000014 ORTHO05D000093 4.4e-09 65.9 56 62.5
Oeu008622.1 Olea europaea HOM05D000866 ORTHO05D000673 5.7e-09 65.5 37 75.7
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 9.8e-09 64.7 66 53.0
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 9.8e-09 64.7 66 53.0
arahy.Tifrunner.gnm1.ann1.U9SLDS Arachis hypogaea HOM05D000963 ORTHO05D010073 2.8e-08 63.2 40 72.5
SEGI_15462 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 6.3e-08 62.0 56 58.9
Phvul.002G181700 Phaseolus vulgaris HOM05D000963 ORTHO05D010073 1.1e-07 61.2 53 60.4
ClCG04G002950 Citrullus lanatus HOM05D000963 ORTHO05D010073 3.1e-07 59.7 27 88.9
arahy.Tifrunner.gnm1.ann1.HLTN97 Arachis hypogaea HOM05D000963 ORTHO05D010073 5.4e-07 58.9 40 72.5
Rhsim12G0135200 Rhododendron simsii HOM05D000963 ORTHO05D004715 9.1e-07 58.2 29 89.7
Lj5C62G3 Lonicera japonica HOM05D003101 ORTHO05D003550 3.5e-06 56.2 27 88.9


User provided reference genes

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