Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.H2YG1F Arachis hypogaea HOM05D005104 ORTHO05D006614 1.7e-49 199.1 106 100.0
arahy.Tifrunner.gnm1.ann1.V9NXIE Arachis hypogaea HOM05D005104 ORTHO05D006614 1.0e-22 110.2 58 93.1
arahy.Tifrunner.gnm1.ann1.PH7E5N Arachis hypogaea HOM05D005104 ORTHO05D006614 1.9e-21 105.9 58 87.9
Lalb_Chr10g0097741 Lupinus albus HOM05D005104 ORTHO05D006614 2.2e-17 92.4 59 79.7
Lj4g0020611 Lotus japonicus HOM05D005104 ORTHO05D006614 9.2e-16 87.0 59 78.0
Phvul.002G208000 Phaseolus vulgaris HOM05D005104 ORTHO05D006614 9.2e-16 87.0 60 73.3
VMungo0251G0802 Vigna mungo HOM05D005104 ORTHO05D006614 1.6e-15 86.3 60 73.3
Glyma.05G118400 Glycine max HOM05D005104 ORTHO05D006614 2.7e-15 85.5 61 73.8
Glyma.08G073500 Glycine max HOM05D005104 ORTHO05D006614 4.6e-15 84.7 58 74.1
MELO3C018651.2 Cucumis melo HOM05D005104 ORTHO05D006614 1.0e-14 83.6 73 61.6
Ca_18345_v3 Cicer arietinum L. HOM05D005104 ORTHO05D006614 1.3e-14 83.2 75 64.0
CANSAT11G2657 Cannabis sativa HOM05D005104 ORTHO05D006614 3.9e-14 81.6 59 72.9
Sed0008592 Sechium edule HOM05D005104 ORTHO05D006614 3.9e-14 81.6 73 60.3
PGR142G2776 Punica granatum HOM05D005104 ORTHO05D006614 5.1e-14 81.3 88 51.1
Haze_10684 Corylus avellana HOM05D005104 ORTHO05D006614 1.5e-13 79.7 75 58.7
TPR.G10460 Trifolium pratense HOM05D005104 ORTHO05D006614 1.5e-13 79.7 81 59.3
CiPaw.05G036500 Carya illinoinensis HOM05D005104 ORTHO05D006614 3.3e-13 78.6 58 69.0
CsaV3_7G006430 Cucumis sativus L. HOM05D005104 ORTHO05D006614 3.3e-13 78.6 75 60.0
Psat7g098720 Pisum sativum HOM05D005104 ORTHO05D006614 3.3e-13 78.6 75 58.7
Cfa005608 Carpinus fangiana HOM05D005104 ORTHO05D006614 4.3e-13 78.2 75 57.3
Manes.14G166400 Manihot esculenta HOM05D005104 ORTHO05D006614 4.3e-13 78.2 58 69.0
Thecc.02G140100 Theobroma cacao HOM05D005104 ORTHO05D006614 2.1e-12 75.9 58 63.8
Eucgr.I02668 Eucalyptus grandis HOM05D005104 ORTHO05D006614 6.2e-12 74.3 75 53.3
Hma1.2p1_0522F.1_g171590 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 6.2e-12 74.3 59 62.7
Hma1.2p1_0522F.1_g171600 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 6.2e-12 74.3 59 62.7
Oeu007957.1 Olea europaea HOM05D005104 ORTHO05D006614 6.2e-12 74.3 87 49.4
Dinv24198 Davidia involucrata HOM05D005104 ORTHO05D006614 1.1e-11 73.6 59 61.0
Duzib248G0158 Durio zibethinus HOM05D005104 ORTHO05D006614 1.4e-11 73.2 58 62.1
Lsat_1_v5_gn_5_107140 Lactuca sativa HOM05D005104 ORTHO05D006614 1.8e-11 72.8 57 59.6
Atru.chr6.1089 Acer truncatum HOM05D005104 ORTHO05D006614 6.8e-11 70.9 59 66.1
Atru.chr6.1109 Acer truncatum HOM05D005104 ORTHO05D006614 6.8e-11 70.9 59 66.1
Prupe.8G062400 Prunus persica HOM05D005104 ORTHO05D006614 6.8e-11 70.9 76 55.3
Gohir.A04G112960 Gossypium hirsutum HOM05D005104 ORTHO05D006614 8.9e-11 70.5 58 63.8
Gohir.A04G113100 Gossypium hirsutum HOM05D005104 ORTHO05D006614 8.9e-11 70.5 58 63.8
ClCG09G015340 Citrullus lanatus HOM05D005104 ORTHO05D006614 1.2e-10 70.1 95 47.4
MD10G1051500 Malus domestica HOM05D005104 ORTHO05D006614 1.2e-10 70.1 60 58.3
HPP92_006000 Vanilla planifolia HOM05D005104 ORTHO05D006614 1.5e-10 69.7 57 59.6
Oeu026158.1 Olea europaea HOM05D005104 ORTHO05D006614 2.0e-10 69.3 57 59.6
Gohir.D04G154400 Gossypium hirsutum HOM05D005104 ORTHO05D006614 2.6e-10 68.9 58 63.8
Gorai.012G141700 Gossypium raimondii HOM05D005104 ORTHO05D006614 2.6e-10 68.9 58 63.8
SalBow6G6009 Salvia bowleyana HOM05D005104 ORTHO05D006614 3.4e-10 68.6 57 61.4
SalBow6G6298 Salvia bowleyana HOM05D005104 ORTHO05D006614 3.4e-10 68.6 57 61.4
COL.COLO4_20953 Corchorus olitorius HOM05D005104 ORTHO05D006614 4.4e-10 68.2 58 58.6
Rhsim05G0108500 Rhododendron simsii HOM05D005104 ORTHO05D006614 4.4e-10 68.2 59 61.0
Duzib132G1169 Durio zibethinus HOM05D005104 ORTHO05D006614 5.8e-10 67.8 55 61.8
Medtr4g094252 Medicago truncatula HOM05D005104 ORTHO05D006614 7.6e-10 67.4 81 51.9
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 9.9e-10 67.0 59 59.3
Migut.N01063 Erythranthe guttata HOM05D005104 ORTHO05D006614 9.9e-10 67.0 87 47.1
CSS0037720 Camellia sinensis var. sinensis HOM05D005104 ORTHO05D006614 1.3e-09 66.6 60 58.3
MSTRG.27791 Avicennia marina HOM05D005104 ORTHO05D006614 1.7e-09 66.2 57 59.6
Peaxi162Scf00003g03543 Petunia axillaris HOM05D005104 ORTHO05D006614 1.7e-09 66.2 70 55.7
TWI59G0245 Tripterygium wilfordii HOM05D005104 ORTHO05D006614 2.2e-09 65.9 57 56.1
Cc02_g21630 Coffea canephora HOM05D005104 ORTHO05D006614 3.8e-09 65.1 57 61.4
Ciclev10029197m.g Citrus clementina HOM05D005104 ORTHO05D006614 6.4e-09 64.3 58 60.3
DCAR_001791 Daucus carota HOM05D005104 ORTHO05D006614 1.1e-08 63.5 60 56.7
FvH4_2g12710 Fragaria vesca HOM05D005104 ORTHO05D006614 1.4e-08 63.2 88 46.6
RcHm_v2.0_Chr6g0273461 Rosa chinensis HOM05D005104 ORTHO05D006614 1.4e-08 63.2 59 57.6
Hma1.2p1_0516F.1_g170490 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 1.9e-08 62.8 81 51.9
SGA_v2.0_scaffold45G17311 Striga asiatica HOM05D005104 ORTHO05D006614 1.9e-08 62.8 58 58.6
HanXRQChr10g0295831 Helianthus annuus HOM05D005104 ORTHO05D006614 2.4e-08 62.4 59 54.2
Nitab4.5_0005015g0050 Nicotiana tabacum HOM05D005104 ORTHO05D006614 2.4e-08 62.4 57 59.6
Actinidia28058 Actinidia chinensis HOM05D005104 ORTHO05D006614 3.2e-08 62.0 61 57.4
Sp2g27220 Schrenkiella parvula HOM05D005104 ORTHO05D006614 4.1e-08 61.6 74 45.9
GSVIVG01003083001 Vitis vinifera HOM05D005104 ORTHO05D006614 4.1e-08 61.6 84 45.2
Thhalv10004872m.g Eutrema salsugineum HOM05D005104 ORTHO05D006614 5.4e-08 61.2 74 44.6
FAN27G3119 Fragaria x ananassa HOM05D005104 ORTHO05D006614 5.4e-08 61.2 88 45.5
Nn1g05321 Nelumbo nucifera HOM05D005104 ORTHO05D006614 9.2e-08 60.5 57 50.9
CAN.G1.36 Capsicum annuum HOM05D005104 ORTHO05D006614 1.2e-07 60.1 57 54.4
Solyc10g047220.2 Solanum lycopersicum HOM05D005104 ORTHO05D006614 1.2e-07 60.1 85 45.9
Sopen10g017460 Solanum pennellii HOM05D005104 ORTHO05D006614 1.2e-07 60.1 85 45.9
BcaC01g02673 Brassica carinata HOM05D005104 ORTHO05D006614 1.6e-07 59.7 74 44.6
C03p62090 Brassica napus HOM05D005104 ORTHO05D006614 1.6e-07 59.7 74 44.6
BolC3t18470H Brassica oleracea HOM05D005104 ORTHO05D006614 1.6e-07 59.7 74 44.6
TAR628G1132 Trochodendron aralioides HOM05D005104 ORTHO05D006614 1.6e-07 59.7 57 54.4
Aqoxy6G00597 Aquilegia oxysepala HOM05D005104 ORTHO05D006614 2.7e-07 58.9 77 50.6
QL11p020542 Quercus lobata HOM05D005104 ORTHO05D006614 2.7e-07 58.9 79 50.6
Hund06391 Selenicereus undatus HOM05D005104 ORTHO05D006614 2.7e-07 58.9 60 56.7
ATR0564G397 Amborella trichopoda HOM05D005104 ORTHO05D006614 3.5e-07 58.5 87 39.1
AUR62010117 Chenopodium quinoa HOM05D005104 ORTHO05D006614 3.5e-07 58.5 58 58.6
PGSC0003DMG400017693 Solanum tuberosum HOM05D005104 ORTHO05D006614 3.5e-07 58.5 85 45.9
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 4.6e-07 58.2 57 52.6
AUR62013112 Chenopodium quinoa HOM05D005104 ORTHO05D006614 4.6e-07 58.2 58 58.6
AT5G64160 Arabidopsis thaliana HOM05D005104 ORTHO05D006614 6.0e-07 57.8 57 50.9
THA.LOC104818435 Tarenaya hassleriana HOM05D005104 ORTHO05D006614 6.0e-07 57.8 58 53.4
BcaB07g29727 Brassica carinata HOM05D005104 ORTHO05D006614 7.8e-07 57.4 74 43.2
AL8G41430 Arabidopsis lyrata HOM05D005104 ORTHO05D006614 1.0e-06 57.0 57 50.9
A06p30880 Brassica napus HOM05D005104 ORTHO05D006614 1.0e-06 57.0 72 44.4
Carub.0008s2495 Capsella rubella HOM05D005104 ORTHO05D006614 1.0e-06 57.0 72 44.4
FAN20G1981 Fragaria x ananassa HOM05D005104 ORTHO05D006614 1.0e-06 57.0 93 46.2
unitig_22.g6836 Utricularia gibba HOM05D001058 ORTHO05D000911 1.0e-06 57.0 57 52.6
BcaB02g09781 Brassica carinata HOM05D005104 ORTHO05D006614 2.3e-06 55.8 72 44.4
CARHR278070 Cardamine hirsuta HOM05D005104 ORTHO05D006614 6.6e-06 54.3 72 43.1


User provided reference genes

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