Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 9.1e-63 243.4 126 100.0
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 7.8e-30 134.0 86 79.1
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 1.0e-29 133.7 101 73.3
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 1.7e-29 132.9 94 72.3
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 1.7e-29 132.9 86 79.1
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 1.7e-29 132.9 93 73.1
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 3.0e-29 132.1 86 76.7
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 3.9e-29 131.7 90 73.3
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 5.1e-29 131.3 86 75.6
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 6.6e-29 131.0 95 70.5
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 8.6e-29 130.6 86 75.6
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 1.1e-28 130.2 93 69.9
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 1.1e-28 130.2 88 73.9
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 1.5e-28 129.8 86 73.3
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 1.5e-28 129.8 86 73.3
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 1.9e-28 129.4 91 70.3
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 1.9e-28 129.4 93 69.9
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 1.9e-28 129.4 89 71.9
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 2.5e-28 129.0 106 66.0
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 3.3e-28 128.6 86 75.6
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 3.3e-28 128.6 86 74.4
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 4.3e-28 128.3 86 74.4
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 4.3e-28 128.3 86 72.1
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 5.6e-28 127.9 93 69.9
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 5.6e-28 127.9 93 68.8
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 5.6e-28 127.9 89 70.8
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 5.6e-28 127.9 93 68.8
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 5.6e-28 127.9 93 68.8
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 5.6e-28 127.9 87 73.6
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 7.3e-28 127.5 94 70.2
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 9.6e-28 127.1 91 70.3
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 9.6e-28 127.1 92 69.6
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 9.6e-28 127.1 86 72.1
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 1.2e-27 126.7 93 68.8
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 1.2e-27 126.7 93 68.8
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 1.2e-27 126.7 90 70.0
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 1.6e-27 126.3 93 68.8
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 2.1e-27 125.9 87 71.3
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 2.1e-27 125.9 98 66.3
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 2.1e-27 125.9 90 72.2
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 2.1e-27 125.9 93 68.8
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 2.1e-27 125.9 85 72.9
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 2.8e-27 125.6 93 67.7
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 2.8e-27 125.6 89 70.8
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 2.8e-27 125.6 89 70.8
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 2.8e-27 125.6 89 70.8
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 3.6e-27 125.2 89 69.7
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 3.6e-27 125.2 85 72.9
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 6.2e-27 124.4 90 66.7
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 6.2e-27 124.4 93 66.7
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 6.2e-27 124.4 86 72.1
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 6.2e-27 124.4 90 68.9
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 1.4e-26 123.2 87 71.3
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 1.4e-26 123.2 87 71.3
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 1.4e-26 123.2 91 69.2
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 1.4e-26 123.2 90 71.1
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 1.4e-26 123.2 90 71.1
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 2.4e-26 122.5 88 70.5
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 3.1e-26 122.1 97 63.9
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 3.1e-26 122.1 89 67.4
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 3.1e-26 122.1 91 68.1
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 4.0e-26 121.7 86 72.1
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 4.0e-26 121.7 90 68.9
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 1.2e-25 120.2 91 69.2
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 1.2e-25 120.2 91 68.1
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 1.2e-25 120.2 90 68.9
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 2.0e-25 119.4 95 65.3
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 2.0e-25 119.4 86 68.6
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 2.6e-25 119.0 91 67.0
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 2.6e-25 119.0 91 65.9
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 4.4e-25 118.2 90 67.8
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 4.4e-25 118.2 90 68.9
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 5.8e-25 117.9 89 65.2
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 9.9e-25 117.1 88 68.2
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 9.9e-25 117.1 90 66.7
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 1.3e-24 116.7 97 62.9
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 1.7e-24 116.3 86 69.8
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 2.2e-24 115.9 90 65.6
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 4.9e-24 114.8 88 64.8
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 4.9e-24 114.8 97 57.7
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 3.2e-23 112.1 90 62.2
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 9.3e-23 110.5 76 72.4
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 1.2e-22 110.2 76 68.4
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 1.2e-22 110.2 86 65.1
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 1.6e-22 109.8 99 55.6
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 2.1e-22 109.4 90 61.1
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 2.1e-22 109.4 90 60.0
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 2.7e-22 109.0 102 55.9
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 7.8e-22 107.5 96 56.2
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.0e-21 107.1 77 71.4
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 1.0e-21 107.1 76 71.1
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 5.1e-21 104.8 88 56.8
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 6.6e-21 104.4 76 68.4
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 1.1e-20 103.6 99 56.6
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 1.5e-20 103.2 87 65.5
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 2.5e-20 102.4 97 57.7
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 9.6e-20 100.5 76 69.7
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.3e-19 100.1 71 73.2
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 6.9e-18 94.4 77 61.0
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 1.2e-17 93.6 60 75.0
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 7.9e-14 80.9 97 43.3
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 1.5e-12 76.6 91 46.2
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 3.3e-12 75.5 103 40.8
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 2.8e-11 72.4 84 45.2
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 1.4e-10 70.1 76 48.7


User provided reference genes

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