Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.GUZ3VJ Arachis hypogaea HOM05D000018 ORTHO05D085309 6.6e-33 143.3 65 100.0
arahy.Tifrunner.gnm1.ann1.2Z5Q4T Arachis hypogaea HOM05D000018 ORTHO05D001333 1.2e-21 105.9 52 92.3
arahy.Tifrunner.gnm1.ann1.MVM4LK Arachis hypogaea HOM05D000018 ORTHO05D001333 1.0e-12 76.3 52 65.4
arahy.Tifrunner.gnm1.ann1.49H55U Arachis hypogaea HOM05D000018 ORTHO05D001333 1.3e-12 75.9 52 65.4
VMungo0647G2467 Vigna mungo HOM05D000018 ORTHO05D001333 5.5e-11 70.5 51 62.7
Glyma.14G178500 Glycine max HOM05D000018 ORTHO05D001333 1.2e-10 69.3 54 59.3
Glyma.14G178600 Glycine max HOM05D000018 ORTHO05D001333 1.6e-10 68.9 50 58.0
Lj1g0028019 Lotus japonicus HOM05D000018 ORTHO05D001333 2.1e-10 68.6 51 60.8
Ciclev10001677m.g Citrus clementina HOM05D000018 ORTHO05D001333 1.3e-09 65.9 51 62.7
Psat2g069120 Pisum sativum HOM05D000018 ORTHO05D001333 2.3e-09 65.1 52 53.8
Phvul.008G178000 Phaseolus vulgaris HOM05D000018 ORTHO05D001333 3.9e-09 64.3 51 56.9
Glyma.02G210800 Glycine max HOM05D000018 ORTHO05D001333 1.1e-08 62.8 51 54.9
Duzib093G1031 Durio zibethinus HOM05D000018 ORTHO05D001333 1.9e-08 62.0 52 53.8
Haze_10560 Corylus avellana HOM05D000018 ORTHO05D001333 5.7e-08 60.5 49 55.1
Medtr5g065010 Medicago truncatula HOM05D000018 ORTHO05D001333 5.7e-08 60.5 52 53.8
Cfa005691 Carpinus fangiana HOM05D000018 ORTHO05D001333 7.4e-08 60.1 49 57.1
Dinv44816 Davidia involucrata HOM05D000018 ORTHO05D001333 9.7e-08 59.7 52 55.8
Haze_10561 Corylus avellana HOM05D000018 ORTHO05D001333 1.3e-07 59.3 49 53.1
Lalb_Chr10g0102601 Lupinus albus HOM05D000018 ORTHO05D001333 1.3e-07 59.3 49 53.1
TPR.G38257 Trifolium pratense HOM05D000018 ORTHO05D001333 1.6e-07 58.9 52 51.9
Thecc.08G064700 Theobroma cacao HOM05D000018 ORTHO05D001333 2.8e-07 58.2 55 50.9
CSS0047624 Camellia sinensis var. sinensis HOM05D000018 ORTHO05D001333 3.7e-07 57.8 50 54.0
COL.COLO4_11983 Corchorus olitorius HOM05D000018 ORTHO05D001333 3.7e-07 57.8 56 51.8
Gohir.D05G225300 Gossypium hirsutum HOM05D000018 ORTHO05D001333 4.8e-07 57.4 51 52.9
Gorai.009G232800 Gossypium raimondii HOM05D000018 ORTHO05D001333 4.8e-07 57.4 51 52.9
CSS0004330 Camellia sinensis var. sinensis HOM05D000018 ORTHO05D001333 6.3e-07 57.0 50 56.0
CSS0004426 Camellia sinensis var. sinensis HOM05D000018 ORTHO05D001333 6.3e-07 57.0 50 56.0
CSS0019348 Camellia sinensis var. sinensis HOM05D000018 ORTHO05D001333 6.3e-07 57.0 50 56.0
CSS0020331 Camellia sinensis var. sinensis HOM05D000018 ORTHO05D001333 6.3e-07 57.0 50 54.0
Dinv00490 Davidia involucrata HOM05D000018 ORTHO05D001333 6.3e-07 57.0 49 51.0
Sabra17G0036300 Salix brachista HOM05D000018 ORTHO05D001333 6.3e-07 57.0 52 59.6
Sabra17G0041200 Salix brachista HOM05D000018 ORTHO05D001333 6.3e-07 57.0 52 59.6
Cfa005688 Carpinus fangiana HOM05D000018 ORTHO05D001333 8.2e-07 56.6 49 53.1
Cfa017906 Carpinus fangiana HOM05D000018 ORTHO05D001333 1.4e-06 55.8 58 48.3
MBI02_g18302_MAGBIO Magnolia biondii HOM05D000018 ORTHO05D001333 1.4e-06 55.8 52 51.9
Hma1.2p1_0522F.1_g171955 Hydrangea macrophylla HOM05D000018 ORTHO05D001333 1.8e-06 55.5 53 49.1
PSO675G8003 Papaver somniferum HOM05D000018 ORTHO05D001333 1.8e-06 55.5 50 54.0
GSVIVG01009099001 Vitis vinifera HOM05D000018 ORTHO05D001333 1.8e-06 55.5 49 53.1
Lj5A232G99 Lonicera japonica HOM05D000018 ORTHO05D001333 2.4e-06 55.1 49 49.0
Actinidia00286 Actinidia chinensis HOM05D000018 ORTHO05D001333 3.1e-06 54.7 50 52.0
Nitab4.5_0006625g0020 Nicotiana tabacum HOM05D000018 ORTHO05D001333 3.1e-06 54.7 50 52.0
Gorai.013G059000 Gossypium raimondii HOM05D000018 ORTHO05D001333 4.1e-06 54.3 51 51.0
Cpa.g.sc42.19 Carica papaya HOM05D000018 ORTHO05D001333 5.3e-06 53.9 50 54.0
Gohir.A05G222600 Gossypium hirsutum HOM05D000018 ORTHO05D001333 5.3e-06 53.9 51 51.0
Phvul.008G178100 Phaseolus vulgaris HOM05D000018 ORTHO05D001333 5.3e-06 53.9 50 46.0
Sabra17G0035700 Salix brachista HOM05D000018 ORTHO05D001333 5.3e-06 53.9 52 51.9
TAR376G1052 Trochodendron aralioides HOM05D000018 ORTHO05D001333 5.3e-06 53.9 50 50.0
Peaxi162Scf00299g00866 Petunia axillaris HOM05D000018 ORTHO05D001333 6.9e-06 53.5 51 49.0
Sabra17G0035400 Salix brachista HOM05D000018 ORTHO05D001333 6.9e-06 53.5 52 55.8
Sabra17G0041800 Salix brachista HOM05D000018 ORTHO05D001333 6.9e-06 53.5 52 55.8
Ca_05348_v3 Cicer arietinum L. HOM05D000018 ORTHO05D001333 9.0e-06 53.1 49 51.0
MBI06_g18770_MAGBIO Magnolia biondii HOM05D000018 ORTHO05D001333 9.0e-06 53.1 51 51.0
Nitab4.5_0010499g0030 Nicotiana tabacum HOM05D000018 ORTHO05D001333 9.0e-06 53.1 50 52.0
Sabra17G0037800 Salix brachista HOM05D000018 ORTHO05D001333 9.0e-06 53.1 52 55.8


User provided reference genes

Program Settings