Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.GIYH3D Arachis hypogaea HOM05D002320 ORTHO05D002428 9.4e-55 216.5 99 100.0
Oeu032491.1 Olea europaea HOM05D002320 ORTHO05D002428 3.7e-19 98.2 68 66.2
Lj9A551T50 Lonicera japonica HOM05D002320 ORTHO05D002428 1.3e-16 89.7 76 55.3
DCAR_025039 Daucus carota HOM05D002320 ORTHO05D002428 1.1e-15 86.7 45 77.8
Lalb_Chr05g0220861 Lupinus albus HOM05D002320 ORTHO05D002428 2.1e-14 82.4 47 76.6
Lalb_Chr19g0126261 Lupinus albus HOM05D002320 ORTHO05D002428 2.1e-14 82.4 45 73.3
AL1G35240 Arabidopsis lyrata HOM05D003354 ORTHO05D003786 2.8e-14 82.0 45 71.1
BcaC07g38036 Brassica carinata HOM05D002320 ORTHO05D002428 6.2e-14 80.9 57 61.4
BcaNung00120 Brassica carinata HOM05D002095 ORTHO05D002058 6.2e-14 80.9 57 61.4
Oeu034850.1 Olea europaea HOM05D002320 ORTHO05D002428 1.5e-12 76.3 45 68.9
EL10Ac5g11554 Beta vulgaris HOM05D003131 ORTHO05D003761 2.6e-12 75.5 39 79.5
TPR.G28182 Trifolium pratense HOM05D002320 ORTHO05D002428 2.6e-12 75.5 65 55.4
Ciclev10026235m.g Citrus clementina HOM05D002320 ORTHO05D002428 2.2e-11 72.4 58 55.2
BcaB03g15937 Brassica carinata HOM05D003354 ORTHO05D003786 3.7e-11 71.6 72 43.1
Ca_14792_v3 Cicer arietinum L. HOM05D002320 ORTHO05D002428 4.1e-10 68.2 45 62.2
C06p51660 Brassica napus HOM05D003354 ORTHO05D003786 3.0e-08 62.0 35 60.0
AL2G37860 Arabidopsis lyrata HOM05D003354 ORTHO05D003786 3.6e-06 55.1 34 55.9
BcaC08g47598 Brassica carinata HOM05D003354 ORTHO05D003786 3.6e-06 55.1 35 57.1
BolC6t40185H Brassica oleracea HOM05D003354 ORTHO05D003786 3.6e-06 55.1 35 57.1
BolC6t40188H Brassica oleracea HOM05D003354 ORTHO05D003786 3.6e-06 55.1 35 57.1
SGA_v2.0_scaffold24G10475 Striga asiatica HOM05D003354 ORTHO05D003786 8.1e-06 53.9 70 40.0


User provided reference genes

Program Settings