Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.9e-147 525.8 261 100.0
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.9e-94 349.7 241 78.8
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 6.9e-81 304.7 244 68.4
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 1.4e-76 290.4 240 66.2
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 3.0e-76 289.3 241 68.0
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 7.4e-75 284.6 242 66.9
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 1.7e-74 283.5 242 65.7
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 9.1e-73 277.7 241 64.3
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 5.9e-72 275.0 243 63.8
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 1.7e-71 273.5 241 63.1
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 2.9e-71 272.7 240 63.8
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 5.0e-71 271.9 240 62.5
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 8.5e-71 271.2 240 62.9
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 1.4e-70 270.4 240 63.3
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 2.5e-70 269.6 241 61.8
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 4.2e-70 268.9 240 62.9
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 9.4e-70 267.7 240 61.2
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 9.4e-70 267.7 240 62.9
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 1.2e-69 267.3 240 63.8
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 7.9e-69 264.6 241 63.1
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 1.0e-68 264.2 240 63.3
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.4e-68 263.8 241 60.2
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.4e-68 263.8 241 61.0
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 1.4e-68 263.8 240 61.2
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 5.1e-68 261.9 241 60.6
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 5.1e-68 261.9 240 61.2
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 1.5e-67 260.4 241 60.6
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 4.4e-67 258.8 241 60.2
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 1.7e-66 256.9 246 58.9
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 2.2e-66 256.5 240 59.2
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 3.7e-66 255.8 244 59.0
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 3.7e-66 255.8 244 59.0
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 1.1e-65 254.2 240 58.3
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 2.4e-65 253.1 250 57.6
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 4.1e-65 252.3 240 59.6
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 7.0e-65 251.5 249 57.8
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 1.2e-64 250.8 240 58.3
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 1.6e-64 250.4 240 59.2
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 1.6e-64 250.4 242 59.1
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 2.6e-64 249.6 240 57.9
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 7.7e-64 248.1 240 57.5
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 7.7e-64 248.1 244 59.4
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 7.7e-64 248.1 240 58.3
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 7.7e-64 248.1 240 59.6
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 7.7e-64 248.1 240 58.3
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 7.7e-64 248.1 242 59.5
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 1.3e-63 247.3 242 58.7
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 1.7e-63 246.9 243 58.8
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 2.2e-63 246.5 241 58.5
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 6.5e-63 245.0 243 58.8
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 6.5e-63 245.0 249 55.4
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 6.5e-63 245.0 243 57.2
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 8.5e-63 244.6 243 57.6
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 1.9e-62 243.4 240 56.7
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 9.4e-62 241.1 244 55.3
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 1.2e-61 240.7 243 55.6
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 1.2e-61 240.7 183 69.9
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 1.2e-61 240.7 246 56.5
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 2.1e-61 240.0 141 81.6
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 4.7e-61 238.8 141 82.3
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 6.1e-61 238.4 243 58.0
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 8.0e-61 238.0 241 55.2
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 8.0e-61 238.0 240 56.2
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.0e-60 237.7 218 58.7
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 1.8e-60 236.9 240 56.2
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 8.8e-60 234.6 242 56.6
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 2.6e-59 233.0 225 57.3
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 2.6e-59 233.0 225 57.3
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 2.6e-59 233.0 146 76.0
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.3e-59 232.6 144 77.1
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.3e-59 232.6 176 67.0
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 5.7e-59 231.9 190 63.2
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 7.5e-59 231.5 272 52.9
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 7.5e-59 231.5 241 56.4
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 9.7e-59 231.1 145 79.3
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 1.7e-58 230.3 242 58.7
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 4.8e-58 228.8 244 53.7
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 6.3e-58 228.4 242 52.5
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 1.1e-57 227.6 148 72.3
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 1.4e-57 227.3 141 78.7
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 5.3e-57 225.3 217 54.8
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 7.0e-57 224.9 243 51.9
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 1.2e-56 224.2 241 52.3
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 1.2e-56 224.2 141 77.3
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 2.0e-56 223.4 148 71.6
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 2.0e-56 223.4 148 71.6
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 2.0e-56 223.4 152 72.4
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 2.7e-56 223.0 244 52.5
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 3.5e-56 222.6 209 55.5
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 4.5e-56 222.2 148 70.3
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 4.5e-56 222.2 141 74.5
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 1.0e-55 221.1 148 74.3
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 1.3e-55 220.7 184 62.0
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 8.5e-55 218.0 182 61.5
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 1.1e-54 217.6 149 72.5
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 2.5e-54 216.5 148 70.9
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 2.7e-53 213.0 240 49.2
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 3.0e-52 209.5 127 78.7
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 6.8e-52 208.4 240 48.8
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 3.7e-50 202.6 146 67.8
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 8.3e-50 201.4 141 68.8
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 1.4e-49 200.7 152 65.8
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 1.6e-48 197.2 118 82.2
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 1.9e-46 190.3 141 68.1
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 1.6e-45 187.2 119 79.0
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 1.5e-43 180.6 141 65.2
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 2.6e-43 179.9 118 72.0
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.1e-41 172.9 243 49.0
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 5.9e-40 168.7 140 57.9
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 7.7e-40 168.3 246 45.5
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 2.5e-38 163.3 154 55.8
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 5.6e-38 162.2 226 39.8
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 2.1e-37 160.2 201 50.7
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 2.0e-32 143.7 143 54.5
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 7.3e-30 135.2 141 51.1
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 4.0e-28 129.4 135 50.4
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 1.7e-23 114.0 66 75.8
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 3.0e-23 113.2 66 77.3
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 3.6e-21 106.3 55 87.3
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 4.7e-21 105.9 62 77.4
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 6.6e-07 58.9 60 55.0


User provided reference genes

Program Settings