Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.GFGC5E Arachis hypogaea HOM05D003720 ORTHO05D005312 6.1e-180 634.0 319 100.0
arahy.Tifrunner.gnm1.ann1.NRTP45 Arachis hypogaea HOM05D003720 ORTHO05D005312 2.0e-175 619.0 319 97.8
arahy.Tifrunner.gnm1.ann1.F3YJTF Arachis hypogaea HOM05D003720 ORTHO05D005312 2.9e-150 535.4 391 74.2
arahy.Tifrunner.gnm1.ann1.S8F21X Arachis hypogaea HOM05D003720 ORTHO05D005312 2.9e-150 535.4 391 74.2
Ca_02544_v3 Cicer arietinum L. HOM05D003720 ORTHO05D005312 1.3e-145 520.0 391 71.6
Glyma.05G012400 Glycine max HOM05D003720 ORTHO05D005312 2.2e-145 519.2 391 71.9
Lj4g0009521 Lotus japonicus HOM05D003720 ORTHO05D005312 1.4e-144 516.5 391 71.4
VMungo1215G1596 Vigna mungo HOM05D003720 ORTHO05D005312 1.9e-144 516.2 391 71.1
Phvul.003G176300 Phaseolus vulgaris HOM05D003720 ORTHO05D005312 4.1e-144 515.0 391 71.1
Medtr4g112045 Medicago truncatula HOM05D003720 ORTHO05D005312 5.4e-144 514.6 391 70.8
Glyma.17G120500 Glycine max HOM05D003720 ORTHO05D005312 7.0e-144 514.2 391 71.1
TPR.G26776 Trifolium pratense HOM05D003720 ORTHO05D005312 1.2e-143 513.5 391 70.8
Psat4g042800 Pisum sativum HOM05D003720 ORTHO05D005312 1.6e-143 513.1 391 70.6
Prupe.7G234400 Prunus persica HOM05D003720 ORTHO05D005312 2.0e-143 512.7 391 70.3
PGR102G1985 Punica granatum HOM05D003720 ORTHO05D005312 1.0e-142 510.4 391 70.1
Atru.chr7.1286 Acer truncatum HOM05D003720 ORTHO05D005312 1.7e-142 509.6 391 69.8
Cc06_g09260 Coffea canephora HOM05D003720 ORTHO05D005312 3.0e-142 508.8 391 69.6
Dinv36598 Davidia involucrata HOM05D003720 ORTHO05D005312 3.9e-142 508.4 391 69.3
Dinv41570 Davidia involucrata HOM05D003720 ORTHO05D005312 5.0e-142 508.1 391 69.8
MD02G1042600 Malus domestica HOM05D003720 ORTHO05D005312 8.6e-142 507.3 391 69.8
Lalb_Chr12g0197621 Lupinus albus HOM05D003720 ORTHO05D005312 1.1e-141 506.9 391 70.3
Manes.03G068200 Manihot esculenta HOM05D003720 ORTHO05D005312 1.1e-141 506.9 391 69.8
QL02p086231 Quercus lobata HOM05D003720 ORTHO05D005312 1.1e-141 506.9 391 69.6
RcHm_v2.0_Chr2g0089861 Rosa chinensis HOM05D003720 ORTHO05D005312 1.1e-141 506.9 391 69.3
CSS0011692 Camellia sinensis var. sinensis HOM05D003720 ORTHO05D005312 1.9e-141 506.1 391 69.1
CSS0041174 Camellia sinensis var. sinensis HOM05D003720 ORTHO05D005312 1.9e-141 506.1 391 69.1
FvH4_1g04290 Fragaria vesca HOM05D003720 ORTHO05D005312 2.5e-141 505.8 391 69.3
FAN19G2601 Fragaria x ananassa HOM05D003720 ORTHO05D005312 2.5e-141 505.8 391 69.3
Lalb_Chr13g0302281 Lupinus albus HOM05D003720 ORTHO05D005312 2.5e-141 505.8 391 70.6
Peaxi162Scf00256g00817 Petunia axillaris HOM05D003720 ORTHO05D005312 4.3e-141 505.0 367 73.6
GSVIVG01015442001 Vitis vinifera HOM05D003720 ORTHO05D005312 4.3e-141 505.0 384 70.1
Gohir.D06G058501 Gossypium hirsutum HOM05D003720 ORTHO05D005312 5.6e-141 504.6 391 70.1
Gorai.010G068600 Gossypium raimondii HOM05D003720 ORTHO05D005312 5.6e-141 504.6 391 70.1
ATR0561G176 Amborella trichopoda HOM05D003720 ORTHO05D005312 7.3e-141 504.2 391 69.1
Haze_25676 Corylus avellana HOM05D003720 ORTHO05D005312 1.2e-140 503.4 391 69.3
Gohir.A06G060200 Gossypium hirsutum HOM05D003720 ORTHO05D005312 1.2e-140 503.4 391 70.1
MD15G1181200 Malus domestica HOM05D003720 ORTHO05D005312 1.2e-140 503.4 391 69.6
Thecc.09G115700 Theobroma cacao HOM05D003720 ORTHO05D005312 1.2e-140 503.4 391 69.8
Cfa003295 Carpinus fangiana HOM05D003720 ORTHO05D005312 1.6e-140 503.1 391 69.3
FAN26G1450 Fragaria x ananassa HOM05D003720 ORTHO05D005312 1.6e-140 503.1 391 69.1
Hma1.2p1_0245F.1_g101400 Hydrangea macrophylla HOM05D003720 ORTHO05D005312 1.6e-140 503.1 391 69.1
Hund12707 Selenicereus undatus HOM05D003720 ORTHO05D005312 1.6e-140 503.1 391 69.3
CiPaw.03G235900 Carya illinoinensis HOM05D003720 ORTHO05D005312 2.8e-140 502.3 391 69.1
Nn8g39280 Nelumbo nucifera HOM05D003720 ORTHO05D005312 3.6e-140 501.9 391 69.3
MELO3C025310.2 Cucumis melo HOM05D003720 ORTHO05D005312 4.7e-140 501.5 391 69.1
SGA_v2.0_scaffold45G17079 Striga asiatica HOM05D003720 ORTHO05D005312 4.7e-140 501.5 391 69.1
ClCG06G010450 Citrullus lanatus HOM05D003720 ORTHO05D005312 6.2e-140 501.1 391 68.8
Eucgr.C04138 Eucalyptus grandis HOM05D003720 ORTHO05D005312 6.2e-140 501.1 391 69.1
Ciclev10007224m.g Citrus clementina HOM05D003720 ORTHO05D005312 8.0e-140 500.7 391 68.8
Aqoxy7G01852 Aquilegia oxysepala HOM05D003720 ORTHO05D005312 1.1e-139 500.4 391 68.0
CANSAT56G4488 Cannabis sativa HOM05D003720 ORTHO05D005312 1.1e-139 500.4 391 68.5
Nitab4.5_0000100g0300 Nicotiana tabacum HOM05D003720 ORTHO05D005312 1.1e-139 500.4 391 68.8
Os10g0575200 Oryza sativa ssp. japonica HOM05D003720 ORTHO05D005312 1.1e-139 500.4 391 68.3
TAR626G1854 Trochodendron aralioides HOM05D003720 ORTHO05D005312 1.1e-139 500.4 391 68.5
CsaV3_1G030910 Cucumis sativus L. HOM05D003720 ORTHO05D005312 1.4e-139 500.0 391 68.5
SalBow6G2056 Salvia bowleyana HOM05D003720 ORTHO05D005312 1.8e-139 499.6 391 69.1
PSO170G5328 Papaver somniferum HOM05D003720 ORTHO05D005312 3.1e-139 498.8 391 68.3
TWI63G0927 Tripterygium wilfordii HOM05D003720 ORTHO05D005312 3.1e-139 498.8 391 68.3
TAR383G0813 Trochodendron aralioides HOM05D003720 ORTHO05D005312 3.1e-139 498.8 391 68.3
Sopen08g011820 Solanum pennellii HOM05D003720 ORTHO05D005312 4.0e-139 498.4 391 69.1
Duzib168G1140 Durio zibethinus HOM05D003720 ORTHO05D005312 5.2e-139 498.0 391 69.6
FAN28G0537 Fragaria x ananassa HOM05D003720 ORTHO05D005312 5.2e-139 498.0 391 68.5
Oeu002223.1 Olea europaea HOM05D003720 ORTHO05D005312 5.2e-139 498.0 391 67.3
Potri.018G072600 Populus trichocarpa HOM05D003720 ORTHO05D005312 5.2e-139 498.0 391 68.8
PGSC0003DMG400013949 Solanum tuberosum HOM05D003720 ORTHO05D005312 5.2e-139 498.0 391 69.1
AUR62031297 Chenopodium quinoa HOM05D003720 ORTHO05D005312 6.8e-139 497.7 391 68.8
Actinidia07451 Actinidia chinensis HOM05D003720 ORTHO05D005312 8.9e-139 497.3 391 67.8
Nitab4.5_0002116g0040 Nicotiana tabacum HOM05D003720 ORTHO05D005312 8.9e-139 497.3 391 68.5
MSTRG.6069 Avicennia marina HOM05D003720 ORTHO05D005312 1.2e-138 496.9 391 68.0
Manes.16G064500 Manihot esculenta HOM05D003720 ORTHO05D005312 1.2e-138 496.9 391 68.3
PSO357G0216 Papaver somniferum HOM05D003720 ORTHO05D005312 1.2e-138 496.9 391 68.0
Sabra18G0064000 Salix brachista HOM05D003720 ORTHO05D005312 2.6e-138 495.7 391 68.5
Solyc08g021920.4 Solanum lycopersicum HOM05D003720 ORTHO05D005312 2.6e-138 495.7 391 68.5
AUR62027382 Chenopodium quinoa HOM05D003720 ORTHO05D005312 9.8e-138 493.8 391 68.8
Gorai.009G022700 Gossypium raimondii HOM05D003720 ORTHO05D005312 9.8e-138 493.8 391 68.5
CAN.G368.4 Capsicum annuum HOM05D003720 ORTHO05D005312 2.2e-137 492.7 391 68.5
Sc08g0004790 Simmondsia chinensis HOM05D003720 ORTHO05D005312 2.2e-137 492.7 391 68.3
Lsat_1_v5_gn_5_99761 Lactuca sativa HOM05D003720 ORTHO05D005312 2.9e-137 492.3 391 67.0
THA.LOC104809021 Tarenaya hassleriana HOM05D003720 ORTHO05D005312 6.4e-137 491.1 391 67.8
Sed0024242 Sechium edule HOM05D003720 ORTHO05D005312 2.4e-136 489.2 391 67.3
DCAR_028737 Daucus carota HOM05D003720 ORTHO05D005312 4.1e-136 488.4 391 66.5
Migut.J01184 Erythranthe guttata HOM05D003720 ORTHO05D005312 4.1e-136 488.4 391 67.0
Gohir.A05G021000 Gossypium hirsutum HOM05D003720 ORTHO05D005312 4.1e-136 488.4 391 68.0
Lj7C641G5 Lonicera japonica HOM05D003720 ORTHO05D005312 4.1e-136 488.4 425 63.8
HanXRQChr10g0317421 Helianthus annuus HOM05D003720 ORTHO05D005312 7.1e-136 487.6 391 66.5
Rhsim03G0245400 Rhododendron simsii HOM05D003720 ORTHO05D005312 2.1e-135 486.1 391 66.2
HPP92_014850 Vanilla planifolia HOM05D003720 ORTHO05D005312 2.7e-135 485.7 391 67.0
CARHR119040 Cardamine hirsuta HOM05D003720 ORTHO05D005312 4.6e-135 485.0 391 67.5
ECA234G2971 Erigeron canadensis HOM05D003720 ORTHO05D005312 6.0e-135 484.6 391 66.0
Aa31LG5G8890 Aethionema arabicum HOM05D003720 ORTHO05D005312 1.3e-134 483.4 391 67.3
Thhalv10001876m.g Eutrema salsugineum HOM05D003720 ORTHO05D005312 1.7e-134 483.0 391 67.3
vmacro06189 Vaccinium macrocarpon HOM05D003720 ORTHO05D005312 1.7e-134 483.0 391 65.7
EL10Ac8g19346 Beta vulgaris HOM05D003720 ORTHO05D005312 3.9e-134 481.9 421 63.7
BolC4t23961H Brassica oleracea HOM05D003720 ORTHO05D005312 5.1e-134 481.5 391 66.2
A07p17900 Brassica napus HOM05D003720 ORTHO05D005312 6.6e-134 481.1 391 66.5
BraA07t29508Z Brassica rapa HOM05D003720 ORTHO05D005312 6.6e-134 481.1 391 66.5
BcaC02g10846 Brassica carinata HOM05D003720 ORTHO05D005312 8.6e-134 480.7 391 66.2
C04p24570 Brassica napus HOM05D003720 ORTHO05D005312 8.6e-134 480.7 391 66.2
AL4G20110 Arabidopsis lyrata HOM05D003720 ORTHO05D005312 1.1e-133 480.3 391 66.8
AT2G26890 Arabidopsis thaliana HOM05D003720 ORTHO05D005312 1.1e-133 480.3 391 66.8
Carub.0004s0739 Capsella rubella HOM05D003720 ORTHO05D005312 1.1e-133 480.3 391 66.8
Sp4g08590 Schrenkiella parvula HOM05D003720 ORTHO05D005312 1.1e-133 480.3 391 66.8
Zm00001eb390320 Zea mays HOM05D003720 ORTHO05D005312 1.9e-133 479.6 391 65.7
CDE07G1594 Ceratophyllum demersum HOM05D003720 ORTHO05D005312 7.3e-133 477.6 391 65.5
SEGI_35777 Sequoiadendron giganteum HOM05D003720 ORTHO05D005312 2.3e-126 456.1 391 63.4
Mapoly0043s0138 Marchantia polymorpha HOM05D003720 ORTHO05D005312 1.2e-122 443.7 391 61.4
Gohir.D05G022400 Gossypium hirsutum HOM05D003720 ORTHO05D005312 3.4e-122 442.2 390 63.3
unitig_22.g6632 Utricularia gibba HOM05D003720 ORTHO05D005312 4.4e-122 441.8 401 61.1
arahy.Tifrunner.gnm1.ann1.H6EN9A Arachis hypogaea HOM05D003720 ORTHO05D005312 1.3e-121 440.3 256 92.6
AagrBONN_evm.TU.Sc2ySwM_368.1081 Anthoceros agrestis HOM05D003720 ORTHO05D005312 6.4e-121 438.0 391 59.3
Pp3c13_3460 Physcomitrium patens HOM05D003720 ORTHO05D005312 6.4e-121 438.0 391 60.1
Pp3c4_24650 Physcomitrium patens HOM05D003720 ORTHO05D005312 4.6e-119 431.8 391 58.3
SMO358G0126 Selaginella moellendorffii HOM05D003720 ORTHO05D005312 3.6e-116 422.2 391 58.8
arahy.Tifrunner.gnm1.ann1.HL09EZ Arachis hypogaea HOM05D003720 ORTHO05D005312 9.0e-115 417.5 323 71.8
Actinidia26424 Actinidia chinensis HOM05D003720 ORTHO05D005312 2.0e-114 416.4 340 66.5
CBR_g4479 Chara braunii HOM05D003720 ORTHO05D005312 6.2e-108 394.8 391 54.7
COL.COLO4_34940 Corchorus olitorius HOM05D003720 ORTHO05D005312 3.5e-103 379.0 348 63.2
CDE06G2493 Ceratophyllum demersum HOM05D003720 ORTHO05D005312 6.0e-95 351.7 202 85.6
arahy.Tifrunner.gnm1.ann1.CMVH84 Arachis hypogaea HOM05D003720 ORTHO05D005312 1.1e-93 347.4 176 98.3
arahy.Tifrunner.gnm1.ann1.QKW76S Arachis hypogaea HOM05D003720 ORTHO05D005312 3.7e-92 342.4 175 97.7
Cpa.g.sc23.156 Carica papaya HOM05D003720 ORTHO05D005312 1.1e-83 314.3 173 89.0
SHI03184 Sapria himalayana HOM05D003720 ORTHO05D005312 7.4e-77 291.6 173 82.1
arahy.Tifrunner.gnm1.ann1.XZYA5I Arachis hypogaea HOM05D003720 ORTHO05D005312 3.0e-70 269.6 174 81.6
arahy.Tifrunner.gnm1.ann1.UX9YIA Arachis hypogaea HOM05D003720 ORTHO05D005312 1.7e-65 253.8 139 96.4
arahy.Tifrunner.gnm1.ann1.JURE59 Arachis hypogaea HOM05D003720 ORTHO05D005312 2.9e-57 226.5 119 95.8
PRCOL_00006435 Prasinoderma coloniale HOM05D003720 ORTHO05D005312 7.2e-56 221.9 425 33.9
CDE06G1063 Ceratophyllum demersum HOM05D003720 ORTHO05D005312 1.2e-50 204.5 202 56.9
Cre12.g486209 Chlamydomonas reinhardtii HOM05D003720 ORTHO05D005312 4.7e-47 192.6 198 48.5
FAN23G2146 Fragaria x ananassa HOM05D003720 ORTHO05D005312 5.4e-43 179.1 111 82.9
Cpa.g.sc23.154 Carica papaya HOM05D003720 ORTHO05D005312 9.2e-43 178.3 111 82.0
SHI03186 Sapria himalayana HOM05D003720 ORTHO05D005312 1.4e-38 164.5 111 73.9
AagrBONN_evm.TU.Sc2ySwM_228.193 Anthoceros agrestis HOM05D011343 ORTHO05D016526 7.8e-10 68.9 187 25.7


User provided reference genes

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