Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.GFBT7E Arachis hypogaea HOM05D000805 ORTHO05D000624 8.1e-66 253.8 151 100.0
VMungo1215G1355 Vigna mungo HOM05D000805 ORTHO05D000624 2.5e-14 82.8 169 40.2
MELO3C017282.2 Cucumis melo HOM05D000805 ORTHO05D000624 3.2e-14 82.4 154 42.2
Glyma.05G013800 Glycine max HOM05D000805 ORTHO05D000624 3.2e-14 82.4 172 40.1
CsaV3_1G003570 Cucumis sativus L. HOM05D000805 ORTHO05D000624 7.2e-14 81.3 153 41.2
CiPaw.15G125600 Carya illinoinensis HOM05D000805 ORTHO05D000624 1.2e-13 80.5 160 41.2
ClCG06G015070 Citrullus lanatus HOM05D000805 ORTHO05D000624 1.2e-13 80.5 154 42.9
Sp3g16650 Schrenkiella parvula HOM05D000805 ORTHO05D000624 1.2e-13 80.5 151 39.1
Cpa.g.sc13.63 Carica papaya HOM05D000805 ORTHO05D000624 2.7e-13 79.3 164 41.5
Phvul.003G177800 Phaseolus vulgaris HOM05D000805 ORTHO05D000624 3.6e-13 79.0 169 39.1
Thecc.03G027500 Theobroma cacao HOM05D000805 ORTHO05D000624 4.7e-13 78.6 162 41.4
AT3G18570 Arabidopsis thaliana HOM05D000805 ORTHO05D000624 6.1e-13 78.2 140 39.3
CARHR093950 Cardamine hirsuta HOM05D000805 ORTHO05D000624 8.0e-13 77.8 151 37.7
BcaB06g25905 Brassica carinata HOM05D000805 ORTHO05D000624 1.8e-12 76.6 151 37.7
CAN.G438.110 Capsicum annuum HOM05D000805 ORTHO05D000624 2.3e-12 76.3 150 42.0
Haze_18596 Corylus avellana HOM05D000805 ORTHO05D000624 2.3e-12 76.3 155 39.4
BcaC05g28600 Brassica carinata HOM05D000805 ORTHO05D000624 1.2e-11 73.9 151 35.8
A05p31050 Brassica napus HOM05D000805 ORTHO05D000624 1.2e-11 73.9 151 36.4
C05p47030 Brassica napus HOM05D000805 ORTHO05D000624 1.2e-11 73.9 151 35.8
BolC5t33433H Brassica oleracea HOM05D000805 ORTHO05D000624 1.2e-11 73.9 151 35.8
BraA05t21947Z Brassica rapa HOM05D000805 ORTHO05D000624 1.2e-11 73.9 151 36.4
Thhalv10021947m.g Eutrema salsugineum HOM05D000805 ORTHO05D000624 1.2e-11 73.9 137 38.7
MD14G1221100 Malus domestica HOM05D000805 ORTHO05D000624 1.2e-11 73.9 180 38.3
AL3G31880 Arabidopsis lyrata HOM05D000805 ORTHO05D000624 1.5e-11 73.6 140 37.9
AL451U10010 Arabidopsis lyrata HOM05D000805 ORTHO05D000624 1.5e-11 73.6 140 37.9
TAR371G0521 Trochodendron aralioides HOM05D000805 ORTHO05D000624 1.5e-11 73.6 169 38.5
Carub.0003s1835 Capsella rubella HOM05D000805 ORTHO05D000624 2.6e-11 72.8 140 37.9
Lalb_Chr13g0302381 Lupinus albus HOM05D000805 ORTHO05D000624 2.6e-11 72.8 170 40.0
Peaxi162Scf00015g00065 Petunia axillaris HOM05D000805 ORTHO05D000624 3.3e-11 72.4 149 41.6
COL.COLO4_22703 Corchorus olitorius HOM05D000805 ORTHO05D000624 5.7e-11 71.6 172 36.6
PGSC0003DMG400005620 Solanum tuberosum HOM05D000805 ORTHO05D000624 5.7e-11 71.6 162 40.7
Atru.chr9.743 Acer truncatum HOM05D000805 ORTHO05D000624 7.5e-11 71.2 173 39.3
DCAR_023179 Daucus carota HOM05D000805 ORTHO05D000624 7.5e-11 71.2 167 38.9
Lj4g0019200 Lotus japonicus HOM05D000805 ORTHO05D000624 9.7e-11 70.9 163 37.4
Prupe.5G216500 Prunus persica HOM05D000805 ORTHO05D000624 9.7e-11 70.9 150 40.7
Sopen03g038680 Solanum pennellii HOM05D000805 ORTHO05D000624 9.7e-11 70.9 149 40.9
Aa31LG8G5430 Aethionema arabicum HOM05D000805 ORTHO05D000624 1.3e-10 70.5 140 36.4
BcaC01g03690 Brassica carinata HOM05D000805 ORTHO05D000624 1.3e-10 70.5 140 37.1
A03p40720 Brassica napus HOM05D000805 ORTHO05D000624 1.3e-10 70.5 140 37.1
C03p49560 Brassica napus HOM05D000805 ORTHO05D000624 1.3e-10 70.5 140 37.1
BolC3t17254H Brassica oleracea HOM05D000805 ORTHO05D000624 1.3e-10 70.5 140 37.1
BraA03t13229Z Brassica rapa HOM05D000805 ORTHO05D000624 1.3e-10 70.5 140 37.1
Dinv36897 Davidia involucrata HOM05D000805 ORTHO05D000624 1.3e-10 70.5 159 37.7
Lalb_Chr07g0178551 Lupinus albus HOM05D000805 ORTHO05D000624 1.3e-10 70.5 168 41.1
Nitab4.5_0003716g0070 Nicotiana tabacum HOM05D000805 ORTHO05D000624 1.3e-10 70.5 162 39.5
Solyc03g119820.1 Solanum lycopersicum HOM05D000805 ORTHO05D000624 1.3e-10 70.5 149 40.9
MD06G1210400 Malus domestica HOM05D000805 ORTHO05D000624 1.7e-10 70.1 159 40.3
Glyma.17G122000 Glycine max HOM05D000805 ORTHO05D000624 2.2e-10 69.7 160 38.8
Medtr4g111770 Medicago truncatula HOM05D000805 ORTHO05D000624 2.2e-10 69.7 151 41.7
RcHm_v2.0_Chr7g0184461 Rosa chinensis HOM05D000805 ORTHO05D000624 2.2e-10 69.7 177 35.0
THA.LOC104819676 Tarenaya hassleriana HOM05D000805 ORTHO05D000624 2.2e-10 69.7 143 37.8
Lj9P432T54 Lonicera japonica HOM05D000805 ORTHO05D000624 3.7e-10 68.9 145 41.4
TAR629G2157 Trochodendron aralioides HOM05D000805 ORTHO05D000624 3.7e-10 68.9 171 38.6
Dinv38593 Davidia involucrata HOM05D000805 ORTHO05D000624 4.8e-10 68.6 157 38.2
Lj9P215T11 Lonicera japonica HOM05D000805 ORTHO05D000624 4.8e-10 68.6 145 42.1
RhsimUnG0106300 Rhododendron simsii HOM05D000805 ORTHO05D000624 4.8e-10 68.6 175 34.9
THA.LOC104821850 Tarenaya hassleriana HOM05D000805 ORTHO05D000624 4.8e-10 68.6 148 37.8
TWI81G1081 Tripterygium wilfordii HOM05D000805 ORTHO05D000624 4.8e-10 68.6 161 39.1
Eucgr.K02651 Eucalyptus grandis HOM05D000805 ORTHO05D000624 6.3e-10 68.2 152 38.2
Nn3g17697 Nelumbo nucifera HOM05D000805 ORTHO05D000624 6.3e-10 68.2 149 40.3
Oeu027135.1 Olea europaea HOM05D000805 ORTHO05D000624 8.2e-10 67.8 143 39.9
EL10Ac5g11243 Beta vulgaris HOM05D000805 ORTHO05D000624 1.1e-09 67.4 143 40.6
Duzib068G0145 Durio zibethinus HOM05D000805 ORTHO05D000624 1.1e-09 67.4 172 38.4
Sc04g0003780 Simmondsia chinensis HOM05D000805 ORTHO05D000624 1.1e-09 67.4 168 36.3
Ciclev10022589m.g Citrus clementina HOM05D000805 ORTHO05D000624 1.4e-09 67.0 149 40.3
FAN18G2577 Fragaria x ananassa HOM05D000805 ORTHO05D000624 1.4e-09 67.0 163 36.8
Sc04g0003940 Simmondsia chinensis HOM05D000805 ORTHO05D000624 1.4e-09 67.0 168 36.3
Manes.05G118400 Manihot esculenta HOM05D000805 ORTHO05D000624 2.4e-09 66.2 167 37.7
BcaB04g18991 Brassica carinata HOM05D000805 ORTHO05D000624 3.1e-09 65.9 132 36.4
FAN08G0915 Fragaria x ananassa HOM05D000805 ORTHO05D000624 3.1e-09 65.9 163 35.6
HanXRQChr05g0153271 Helianthus annuus HOM05D000805 ORTHO05D000624 3.1e-09 65.9 154 38.3
BraA01t03666Z Brassica rapa HOM05D000805 ORTHO05D000624 4.1e-09 65.5 153 36.6
CANSAT56G2119 Cannabis sativa HOM05D000805 ORTHO05D000624 4.1e-09 65.5 151 37.7
Migut.L01615 Erythranthe guttata HOM05D000805 ORTHO05D000624 4.1e-09 65.5 135 40.0
FvH4_5g12770 Fragaria vesca HOM05D000805 ORTHO05D000624 4.1e-09 65.5 163 35.6
FAN18G2287 Fragaria x ananassa HOM05D000805 ORTHO05D000624 4.1e-09 65.5 163 35.6
Glyma.06G209900 Glycine max HOM05D000805 ORTHO05D000624 4.1e-09 65.5 133 43.6
Sp1g35900 Schrenkiella parvula HOM05D000805 ORTHO05D000624 4.1e-09 65.5 147 38.1
TWI15G0225 Tripterygium wilfordii HOM05D000805 ORTHO05D000624 4.1e-09 65.5 163 37.4
GSVIVG01008228001 Vitis vinifera HOM05D000805 ORTHO05D000624 4.1e-09 65.5 145 37.2
Lj1g0022824 Lotus japonicus HOM05D000805 ORTHO05D000624 5.3e-09 65.1 173 38.2
TAR622G1246 Trochodendron aralioides HOM05D000805 ORTHO05D000624 5.3e-09 65.1 147 40.1
Thhalv10011990m.g Eutrema salsugineum HOM05D000805 ORTHO05D000624 7.0e-09 64.7 147 37.4
PSO384G3992 Papaver somniferum HOM05D000805 ORTHO05D000624 7.0e-09 64.7 149 39.6
Sabra12G0042600 Salix brachista HOM05D000805 ORTHO05D000624 7.0e-09 64.7 149 40.9
Nitab4.5_0001432g0070 Nicotiana tabacum HOM05D000805 ORTHO05D000624 1.2e-08 63.9 100 46.0
PSO339G2444 Papaver somniferum HOM05D000805 ORTHO05D000624 1.2e-08 63.9 149 38.9
C01p45660 Brassica napus HOM05D000805 ORTHO05D000624 1.6e-08 63.5 142 36.6
FAN13G0318 Fragaria x ananassa HOM05D000805 ORTHO05D000624 1.6e-08 63.5 147 36.1
Nitab4.5_0007105g0030 Nicotiana tabacum HOM05D000805 ORTHO05D000624 1.6e-08 63.5 113 44.2
Sabra15G0076100 Salix brachista HOM05D000805 ORTHO05D000624 1.6e-08 63.5 172 37.8
CSS0016408 Camellia sinensis var. sinensis HOM05D000805 ORTHO05D000624 2.0e-08 63.2 174 35.6
Ca_02532_v3 Cicer arietinum L. HOM05D000805 ORTHO05D000624 2.0e-08 63.2 171 37.4
A01p35870 Brassica napus HOM05D000805 ORTHO05D000624 2.7e-08 62.8 153 35.9
BolC1t04527H Brassica oleracea HOM05D000805 ORTHO05D000624 2.7e-08 62.8 142 36.6
Oeu016163.1 Olea europaea HOM05D000805 ORTHO05D000624 4.5e-08 62.0 143 37.1
Psat4g044680 Pisum sativum HOM05D000805 ORTHO05D000624 4.5e-08 62.0 153 39.2
SGA_v2.0_scaffold94G28615 Striga asiatica HOM05D000805 ORTHO05D000624 4.5e-08 62.0 149 36.9
ECA246G0147 Erigeron canadensis HOM05D000805 ORTHO05D000624 5.9e-08 61.6 178 34.3
PGSC0003DMG400004072 Solanum tuberosum HOM05D000805 ORTHO05D000624 5.9e-08 61.6 154 35.7
CARHR039000 Cardamine hirsuta HOM05D000805 ORTHO05D000624 7.7e-08 61.2 131 37.4
Actinidia35074 Actinidia chinensis HOM05D000805 ORTHO05D000624 1.0e-07 60.8 138 35.5
QL10p023095 Quercus lobata HOM05D000805 ORTHO05D000624 1.0e-07 60.8 167 34.7
BcaC08g43105 Brassica carinata HOM05D000805 ORTHO05D000624 1.3e-07 60.5 147 36.1
A06p04050 Brassica napus HOM05D002822 ORTHO05D003179 1.3e-07 60.5 147 36.1
C06p03750 Brassica napus HOM05D002822 ORTHO05D003179 1.3e-07 60.5 147 36.1
Lsat_1_v5_gn_5_24340 Lactuca sativa HOM05D000805 ORTHO05D000624 1.7e-07 60.1 145 36.6
PGR083G2122 Punica granatum HOM05D000805 ORTHO05D000624 1.7e-07 60.1 145 35.9
Os05g0576700 Oryza sativa ssp. japonica HOM05D000805 ORTHO05D000624 2.2e-07 59.7 150 35.3
ATR0053G013 Amborella trichopoda HOM05D000805 ORTHO05D000624 2.9e-07 59.3 142 35.2
AT1G48990 Arabidopsis thaliana HOM05D000805 ORTHO05D000624 2.9e-07 59.3 124 37.9
Aqoxy3G00383 Aquilegia oxysepala HOM05D000805 ORTHO05D000624 3.8e-07 58.9 131 34.4
HPP92_008054 Vanilla planifolia HOM05D000805 ORTHO05D000624 3.8e-07 58.9 145 33.1
Potri.012G059400 Populus trichocarpa HOM05D000805 ORTHO05D000624 5.0e-07 58.5 171 36.3
Ah.11g047180 Amaranthus hybridus HOM05D000805 ORTHO05D000624 1.1e-06 57.4 160 38.8
Gohir.A09G045000 Gossypium hirsutum HOM05D000805 ORTHO05D000624 1.5e-06 57.0 127 34.6
MBI10_g08548_MAGBIO Magnolia biondii HOM05D000805 ORTHO05D000624 1.5e-06 57.0 150 37.3
Peaxi162Scf00013g00094 Petunia axillaris HOM05D000805 ORTHO05D000624 1.5e-06 57.0 148 38.5
AL1G55860 Arabidopsis lyrata HOM05D001087 ORTHO05D000624 1.9e-06 56.6 124 37.1
BcaB04g17374 Brassica carinata HOM05D000805 ORTHO05D000624 1.9e-06 56.6 147 34.7
Carub.0001s3816 Capsella rubella HOM05D000805 ORTHO05D000624 5.5e-06 55.1 126 37.3
Gohir.A11G007500 Gossypium hirsutum HOM05D000805 ORTHO05D000624 5.5e-06 55.1 153 32.7
Gohir.D11G006600 Gossypium hirsutum HOM05D000805 ORTHO05D000624 7.2e-06 54.7 153 32.7
Gorai.007G007900 Gossypium raimondii HOM05D000805 ORTHO05D000624 7.2e-06 54.7 153 32.7
Lalb_Chr23g0274941 Lupinus albus HOM05D000805 ORTHO05D000624 7.2e-06 54.7 148 40.5
PGR044G2217 Punica granatum HOM05D000805 ORTHO05D000624 7.2e-06 54.7 162 34.6
Ca_02660_v3 Cicer arietinum L. HOM05D000805 ORTHO05D000624 9.4e-06 54.3 117 37.6
Gohir.D09G046500 Gossypium hirsutum HOM05D000805 ORTHO05D000624 9.4e-06 54.3 129 34.9
Gorai.006G063600 Gossypium raimondii HOM05D000805 ORTHO05D000624 9.4e-06 54.3 129 34.9
Solyc06g069260.1 Solanum lycopersicum HOM05D000805 ORTHO05D000624 9.4e-06 54.3 152 32.2


User provided reference genes

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