Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.GBW8AP Arachis hypogaea HOM05D003357 ORTHO05D003779 8.2e-108 394.0 246 100.0
arahy.Tifrunner.gnm1.ann1.S31UIX Arachis hypogaea HOM05D003357 ORTHO05D003779 2.3e-94 349.4 221 99.5
TPR.G19716 Trifolium pratense HOM05D003357 ORTHO05D003779 9.8e-45 184.5 142 66.9
MD08G1227400 Malus domestica HOM05D003357 ORTHO05D003779 2.2e-44 183.3 148 64.2
Glyma.08G184000 Glycine max HOM05D003357 ORTHO05D003779 2.9e-44 183.0 142 66.2
arahy.Tifrunner.gnm1.ann1.11V3F3 Arachis hypogaea HOM05D003357 ORTHO05D003779 3.7e-44 182.6 145 66.9
arahy.Tifrunner.gnm1.ann1.I2CYKQ Arachis hypogaea HOM05D003357 ORTHO05D003779 3.7e-44 182.6 145 66.9
ClCG05G009890 Citrullus lanatus HOM05D003357 ORTHO05D003779 3.7e-44 182.6 150 66.7
Lalb_Chr20g0123351 Lupinus albus HOM05D003357 ORTHO05D003779 4.9e-44 182.2 145 66.2
COL.COLO4_17901 Corchorus olitorius HOM05D005050 ORTHO05D006198 1.1e-43 181.0 168 57.1
CSS0044852 Camellia sinensis var. sinensis HOM05D003357 ORTHO05D003779 1.4e-43 180.6 153 63.4
CiPaw.06G149700 Carya illinoinensis HOM05D003357 ORTHO05D003779 1.4e-43 180.6 149 63.8
Ca_00094_v3 Cicer arietinum L. HOM05D003357 ORTHO05D003779 1.9e-43 180.3 142 66.2
Ca_29933_v3 Cicer arietinum L. HOM05D003357 ORTHO05D003779 1.9e-43 180.3 142 66.2
ClCG00G003530 Citrullus lanatus HOM05D003357 ORTHO05D003779 3.2e-43 179.5 142 65.5
ClCG09G014530 Citrullus lanatus HOM05D003357 ORTHO05D003779 3.2e-43 179.5 142 65.5
Haze_01610 Corylus avellana HOM05D003357 ORTHO05D003779 3.2e-43 179.5 149 65.1
Haze_01612 Corylus avellana HOM05D003357 ORTHO05D003779 3.2e-43 179.5 149 65.1
Hma1.2p1_0704F.1_g206850 Hydrangea macrophylla HOM05D003357 ORTHO05D003779 3.2e-43 179.5 144 66.0
Phvul.006G211600 Phaseolus vulgaris HOM05D003357 ORTHO05D003779 3.2e-43 179.5 142 64.8
Sed0024772 Sechium edule HOM05D003357 ORTHO05D003779 3.2e-43 179.5 142 64.1
VMungo0540G1809 Vigna mungo HOM05D003357 ORTHO05D003779 3.2e-43 179.5 142 65.5
Cfa005555 Carpinus fangiana HOM05D003357 ORTHO05D003779 4.1e-43 179.1 149 64.4
Cpa.g.sc2.31 Carica papaya HOM05D003357 ORTHO05D003779 5.4e-43 178.7 149 64.4
Glyma.15G048800 Glycine max HOM05D003357 ORTHO05D003779 9.2e-43 177.9 139 66.2
MELO3C031692.2 Cucumis melo HOM05D003357 ORTHO05D003779 1.2e-42 177.6 153 63.4
MELO3C012699.2 Cucumis melo HOM05D003357 ORTHO05D003779 2.7e-42 176.4 142 64.8
Thecc.02G042200 Theobroma cacao HOM05D003357 ORTHO05D003779 2.7e-42 176.4 152 60.5
Gohir.D02G232200 Gossypium hirsutum HOM05D003357 ORTHO05D003779 3.5e-42 176.0 152 61.8
CsaV3_7G022210 Cucumis sativus L. HOM05D003357 ORTHO05D003779 4.6e-42 175.6 139 66.2
Sed0004213 Sechium edule HOM05D003357 ORTHO05D003779 6.0e-42 175.3 150 62.0
Dinv24254 Davidia involucrata HOM05D003357 ORTHO05D003779 7.8e-42 174.9 142 63.4
Gorai.005G260000 Gossypium raimondii HOM05D003357 ORTHO05D003779 7.8e-42 174.9 151 61.6
Actinidia39063 Actinidia chinensis HOM05D003357 ORTHO05D003779 1.3e-41 174.1 161 62.1
Ciclev10002130m.g Citrus clementina HOM05D003357 ORTHO05D003779 1.3e-41 174.1 152 61.8
TAR197G0001 Trochodendron aralioides HOM05D003357 ORTHO05D003779 1.3e-41 174.1 143 62.2
Gohir.A03G210600 Gossypium hirsutum HOM05D003357 ORTHO05D003779 1.7e-41 173.7 151 60.9
Nitab4.5_0003071g0080 Nicotiana tabacum HOM05D003357 ORTHO05D003779 1.7e-41 173.7 144 63.2
QL11p019146 Quercus lobata HOM05D003357 ORTHO05D003779 2.3e-41 173.3 149 60.4
Sc02g0001800 Simmondsia chinensis HOM05D003357 ORTHO05D003779 3.0e-41 172.9 152 59.2
Duzib052G0578 Durio zibethinus HOM05D003357 ORTHO05D003779 5.1e-41 172.2 153 58.8
Lj9A312T45 Lonicera japonica HOM05D003357 ORTHO05D003779 5.1e-41 172.2 142 63.4
Nitab4.5_0009907g0030 Nicotiana tabacum HOM05D003357 ORTHO05D003779 5.1e-41 172.2 142 63.4
TWI14G1244 Tripterygium wilfordii HOM05D003357 ORTHO05D003779 5.1e-41 172.2 149 59.1
CAN.G1352.13 Capsicum annuum HOM05D003357 ORTHO05D003779 8.6e-41 171.4 143 65.0
Potri.003G021934 Populus trichocarpa HOM05D003357 ORTHO05D003779 8.6e-41 171.4 154 58.4
CSS0046968 Camellia sinensis var. sinensis HOM05D003357 ORTHO05D003779 1.1e-40 171.0 141 64.5
Duzib248G1129 Durio zibethinus HOM05D003357 ORTHO05D003779 1.1e-40 171.0 152 59.2
Solyc01g104580.3 Solanum lycopersicum HOM05D003357 ORTHO05D003779 1.1e-40 171.0 143 62.2
Sopen01g047090 Solanum pennellii HOM05D003357 ORTHO05D003779 1.1e-40 171.0 143 62.2
Eucgr.I02708 Eucalyptus grandis HOM05D003357 ORTHO05D003779 1.5e-40 170.6 156 57.7
Lj6g0024688 Lotus japonicus HOM05D003357 ORTHO05D003779 1.5e-40 170.6 139 61.9
Gohir.A01G001200 Gossypium hirsutum HOM05D003357 ORTHO05D003779 1.9e-40 170.2 154 57.8
Gorai.002G001400 Gossypium raimondii HOM05D003357 ORTHO05D003779 1.9e-40 170.2 154 57.8
Nitab4.5_0003615g0040 Nicotiana tabacum HOM05D003357 ORTHO05D003779 2.5e-40 169.9 144 63.2
PGSC0003DMG400029777 Solanum tuberosum HOM05D003357 ORTHO05D003779 2.5e-40 169.9 144 64.6
TWI23G0276 Tripterygium wilfordii HOM05D003357 ORTHO05D003779 3.3e-40 169.5 149 58.4
Gohir.D01G000900 Gossypium hirsutum HOM05D003357 ORTHO05D003779 4.3e-40 169.1 154 57.1
Lj5C246T11 Lonicera japonica HOM05D003357 ORTHO05D003779 4.3e-40 169.1 143 61.5
Manes.07G012600 Manihot esculenta HOM05D003357 ORTHO05D003779 4.3e-40 169.1 150 61.3
Peaxi162Scf00011g00031 Petunia axillaris HOM05D003357 ORTHO05D003779 7.3e-40 168.3 147 61.2
PGR142G3651 Punica granatum HOM05D003357 ORTHO05D003779 9.5e-40 167.9 155 59.4
Sabra03G0013900 Salix brachista HOM05D003357 ORTHO05D003779 9.5e-40 167.9 153 58.2
Medtr2g007830 Medicago truncatula HOM05D003357 ORTHO05D003779 1.6e-39 167.2 143 60.1
CiPaw.05G042100 Carya illinoinensis HOM05D003357 ORTHO05D003779 2.1e-39 166.8 153 58.8
Nitab4.5_0000078g0390 Nicotiana tabacum HOM05D003357 ORTHO05D003779 2.1e-39 166.8 145 61.4
THA.LOC104805045 Tarenaya hassleriana HOM05D003357 ORTHO05D003779 2.1e-39 166.8 147 59.2
AT2G01080 Arabidopsis thaliana HOM05D003357 ORTHO05D003779 2.8e-39 166.4 141 59.6
Peaxi162Scf00003g03752 Petunia axillaris HOM05D003357 ORTHO05D003779 2.8e-39 166.4 143 60.8
vmacro01792 Vaccinium macrocarpon HOM05D003357 ORTHO05D003779 3.6e-39 166.0 156 57.7
Atru.chr6.1007 Acer truncatum HOM05D003357 ORTHO05D003779 4.7e-39 165.6 149 59.1
AL5G10030 Arabidopsis lyrata HOM05D003357 ORTHO05D003779 6.2e-39 165.2 141 58.9
FvH4_5g29780 Fragaria vesca HOM05D003357 ORTHO05D003779 6.2e-39 165.2 141 60.3
FAN18G4337 Fragaria x ananassa HOM05D003357 ORTHO05D003779 6.2e-39 165.2 141 60.3
FAN08G0651 Fragaria x ananassa HOM05D003357 ORTHO05D003779 1.1e-38 164.5 142 59.9
CANSAT11G1252 Cannabis sativa HOM05D003357 ORTHO05D003779 1.4e-38 164.1 172 55.2
CsaV3_3G018700 Cucumis sativus L. HOM05D003357 ORTHO05D003779 1.4e-38 164.1 153 58.2
Nn5g27960 Nelumbo nucifera HOM05D003357 ORTHO05D003779 1.4e-38 164.1 142 59.9
Prupe.1G564500 Prunus persica HOM05D003357 ORTHO05D003779 2.3e-38 163.3 152 58.6
SalBow5G0183 Salvia bowleyana HOM05D003357 ORTHO05D003779 3.1e-38 162.9 161 59.0
SGA_v2.0_scaffold1G00338 Striga asiatica HOM05D003357 ORTHO05D003779 3.1e-38 162.9 160 60.0
SGA_v2.0_scaffold110G31275 Striga asiatica HOM05D003357 ORTHO05D003779 4.0e-38 162.5 149 59.7
MSTRG.5244 Avicennia marina HOM05D003357 ORTHO05D003779 5.2e-38 162.2 144 58.3
FAN13G0157 Fragaria x ananassa HOM05D003357 ORTHO05D003779 5.2e-38 162.2 142 59.2
Manes.10G133000 Manihot esculenta HOM05D003357 ORTHO05D003779 5.2e-38 162.2 169 56.2
CARHR143630 Cardamine hirsuta HOM05D003357 ORTHO05D003779 6.8e-38 161.8 141 58.2
Dinv19344 Davidia involucrata HOM05D003357 ORTHO05D003779 6.8e-38 161.8 146 60.3
Lsat_1_v5_gn_7_78341 Lactuca sativa HOM05D003357 ORTHO05D003779 6.8e-38 161.8 140 60.7
SalBow5G2536 Salvia bowleyana HOM05D003357 ORTHO05D003779 8.9e-38 161.4 160 58.8
Psat1g219760 Pisum sativum HOM05D003357 ORTHO05D003779 1.2e-37 161.0 123 67.5
CDE06G2726 Ceratophyllum demersum HOM05D003357 ORTHO05D003779 1.5e-37 160.6 161 53.4
HanXRQChr10g0300241 Helianthus annuus HOM05D003357 ORTHO05D003779 1.5e-37 160.6 145 57.9
Lsat_1_v5_gn_9_116201 Lactuca sativa HOM05D003357 ORTHO05D003779 1.5e-37 160.6 164 53.7
Carub.0005s0007 Capsella rubella HOM05D003357 ORTHO05D003779 2.0e-37 160.2 161 55.9
MD15G1419800 Malus domestica HOM05D003357 ORTHO05D003779 2.0e-37 160.2 146 58.2
BcaC06g34220 Brassica carinata HOM05D003357 ORTHO05D003779 2.6e-37 159.8 147 57.1
A06p44690 Brassica napus HOM05D003357 ORTHO05D003779 2.6e-37 159.8 146 57.5
BolC7t43694H Brassica oleracea HOM05D003357 ORTHO05D003779 2.6e-37 159.8 146 57.5
BraA06t27342Z Brassica rapa HOM05D003357 ORTHO05D003779 2.6e-37 159.8 146 57.5
DCAR_021821 Daucus carota HOM05D003357 ORTHO05D003779 2.6e-37 159.8 142 60.6
Oeu041075.1 Olea europaea HOM05D003357 ORTHO05D003779 5.8e-37 158.7 143 58.7
Thhalv10001009m.g Eutrema salsugineum HOM05D003357 ORTHO05D003779 7.6e-37 158.3 165 55.8
CDE06G1413 Ceratophyllum demersum HOM05D003357 ORTHO05D003779 1.7e-36 157.1 163 54.0
HanXRQChr16g0514191 Helianthus annuus HOM05D003357 ORTHO05D003779 2.9e-36 156.4 168 51.2
HanXRQChr11g0337561 Helianthus annuus HOM05D003357 ORTHO05D003779 3.8e-36 156.0 140 57.9
Manes.12G086500 Manihot esculenta HOM05D003357 ORTHO05D003779 3.8e-36 156.0 169 55.6
A02p31650 Brassica napus HOM05D003357 ORTHO05D003779 8.4e-36 154.8 145 55.9
C02p48990 Brassica napus HOM05D003357 ORTHO05D003779 8.4e-36 154.8 145 55.9
BolC2t10993H Brassica oleracea HOM05D003357 ORTHO05D003779 8.4e-36 154.8 145 55.9
BraA02t08168Z Brassica rapa HOM05D003357 ORTHO05D003779 8.4e-36 154.8 145 55.9
Migut.N01027 Erythranthe guttata HOM05D003357 ORTHO05D003779 3.2e-35 152.9 161 55.9
Manes.03G085403 Manihot esculenta HOM05D003357 ORTHO05D003779 4.1e-35 152.5 167 55.1
Manes.18G118000 Manihot esculenta HOM05D003357 ORTHO05D003779 4.1e-35 152.5 181 50.3
Manes.10G036100 Manihot esculenta HOM05D003357 ORTHO05D003779 7.1e-35 151.8 169 54.4
Lsat_1_v5_gn_5_107641 Lactuca sativa HOM05D003357 ORTHO05D003779 9.2e-35 151.4 148 52.0
Migut.B00658 Erythranthe guttata HOM05D003357 ORTHO05D003779 1.2e-34 151.0 142 56.3
Manes.01G111900 Manihot esculenta HOM05D003357 ORTHO05D003779 1.2e-34 151.0 169 53.8
Sp2g12550 Schrenkiella parvula HOM05D003357 ORTHO05D003779 1.2e-34 151.0 165 53.9
MBI06_g01047_MAGBIO Magnolia biondii HOM05D003357 ORTHO05D003779 1.6e-34 150.6 142 53.5
RcHm_v2.0_Chr7g0223311 Rosa chinensis HOM05D003357 ORTHO05D003779 1.6e-34 150.6 126 62.7
unitig_749.g13510 Utricularia gibba HOM05D000349 ORTHO05D003779 2.7e-34 149.8 140 54.3
Potri.001G208000 Populus trichocarpa HOM05D003357 ORTHO05D003779 3.5e-34 149.4 152 53.3
MSTRG.16542 Avicennia marina HOM05D003357 ORTHO05D003779 4.6e-34 149.1 141 57.4
Aa31LG2G8800 Aethionema arabicum HOM05D003357 ORTHO05D003779 5.1e-33 145.6 148 52.7
Manes.03G114750 Manihot esculenta HOM05D003357 ORTHO05D003779 6.6e-33 145.2 159 54.1
Aqoxy5G02480 Aquilegia oxysepala HOM05D003357 ORTHO05D003779 1.5e-32 144.1 156 51.3
PSO017G4220 Papaver somniferum HOM05D003357 ORTHO05D003779 7.3e-32 141.7 163 49.1
Zm00001eb011530 Zea mays HOM05D003357 ORTHO05D003779 2.8e-31 139.8 145 53.8
Os03g0262700 Oryza sativa ssp. japonica HOM05D003357 ORTHO05D003779 3.6e-31 139.4 167 50.9
Glyma.08G077900 Glycine max HOM05D003357 ORTHO05D003779 6.2e-31 138.7 143 53.1
PSO170G2411 Papaver somniferum HOM05D003357 ORTHO05D003779 1.1e-30 137.9 187 45.5
Zm00001eb398130 Zea mays HOM05D003357 ORTHO05D003779 5.2e-30 135.6 142 54.2
unitig_26.g9557 Utricularia gibba HOM05D003357 ORTHO05D003779 2.0e-29 133.7 114 58.8
Rhsim11G0132500 Rhododendron simsii HOM05D003357 ORTHO05D003779 1.1e-27 127.9 101 62.4
HPP92_011155 Vanilla planifolia HOM05D003357 ORTHO05D003779 2.4e-27 126.7 152 46.7
HanXRQChr03g0066491 Helianthus annuus HOM05D003357 ORTHO05D003779 1.2e-26 124.4 134 47.8
ATR0121G007 Amborella trichopoda HOM05D003357 ORTHO05D003779 2.7e-26 123.2 153 43.8
Peaxi162Scf00018g00081 Petunia axillaris HOM05D003357 ORTHO05D003779 4.6e-26 122.5 100 59.0
ECA236G2437 Erigeron canadensis HOM05D003357 ORTHO05D003779 1.3e-25 120.9 139 48.2
Manes.07G113500 Manihot esculenta HOM05D003357 ORTHO05D003779 1.7e-25 120.6 138 52.2
ECA234G2199 Erigeron canadensis HOM05D003357 ORTHO05D003779 2.3e-25 120.2 101 58.4
SHI16610 Sapria himalayana HOM05D003357 ORTHO05D003779 3.9e-25 119.4 132 47.7
Lj6g0024689 Lotus japonicus HOM05D003357 ORTHO05D003779 1.1e-24 117.9 158 46.2
SEGI_11822 Sequoiadendron giganteum HOM05D003357 ORTHO05D003779 2.5e-24 116.7 158 41.1
Manes.17G088150 Manihot esculenta HOM05D003357 ORTHO05D003779 2.1e-23 113.6 145 47.6
EL10Ac9g22198 Beta vulgaris HOM05D003357 ORTHO05D003779 3.1e-22 109.8 161 46.0
HanXRQChr03g0066581 Helianthus annuus HOM05D003357 ORTHO05D003779 9.0e-22 108.2 101 52.5
AUR62027010 Chenopodium quinoa HOM05D003357 ORTHO05D003779 9.9e-21 104.8 161 44.7
AUR62030850 Chenopodium quinoa HOM05D000445 ORTHO05D000314 9.9e-21 104.8 161 44.7
HPP92_027206 Vanilla planifolia HOM05D003357 ORTHO05D003779 9.9e-21 104.8 155 43.9
CSS0006159 Camellia sinensis var. sinensis HOM05D003357 ORTHO05D003779 2.9e-20 103.2 79 67.1
GSVIVG01029690001 Vitis vinifera HOM05D003357 ORTHO05D003779 4.9e-20 102.4 79 68.4
Cc02_g22170 Coffea canephora HOM05D003357 ORTHO05D003779 6.4e-20 102.1 79 65.8
SEGI_24152 Sequoiadendron giganteum HOM05D003357 ORTHO05D003779 1.5e-16 90.9 140 35.7
ECA240G3987 Erigeron canadensis HOM05D000003 ORTHO05D000004 9.0e-14 81.6 70 58.6
MD15G1282800 Malus domestica HOM05D003357 ORTHO05D003779 2.2e-12 77.0 72 48.6
SMO164G0048 Selaginella moellendorffii HOM05D003357 ORTHO05D003779 6.4e-12 75.5 164 34.1
MBI13_g01678_MAGBIO Magnolia biondii HOM05D003357 ORTHO05D003779 7.1e-11 72.0 161 29.8
Dinv37830 Davidia involucrata HOM05D003357 ORTHO05D003779 1.2e-10 71.2 165 30.3
Manes.04G150000 Manihot esculenta HOM05D003357 ORTHO05D003779 1.3e-09 67.8 161 26.7
ATR0317G009 Amborella trichopoda HOM05D003357 ORTHO05D003779 3.0e-09 66.6 153 28.1
HanXRQChr15g0467891 Helianthus annuus HOM05D003357 ORTHO05D003779 3.0e-09 66.6 90 46.7
Hma1.2p1_0090F.1_g045910 Hydrangea macrophylla HOM05D003357 ORTHO05D003779 5.1e-09 65.9 162 30.2
Peaxi162Scf00038g02213 Petunia axillaris HOM05D003357 ORTHO05D003779 1.3e-07 61.2 166 26.5
CiPaw.02G132100 Carya illinoinensis HOM05D003357 ORTHO05D003779 2.1e-07 60.5 149 26.2
COL.COLO4_30848 Corchorus olitorius HOM05D003357 ORTHO05D003779 3.7e-07 59.7 158 27.2
Migut.I01123 Erythranthe guttata HOM05D003357 ORTHO05D003779 4.8e-07 59.3 164 26.8
Gohir.A05G141100 Gossypium hirsutum HOM05D003357 ORTHO05D003779 1.1e-06 58.2 166 25.9
Gohir.D05G143300 Gossypium hirsutum HOM05D003357 ORTHO05D003779 1.1e-06 58.2 166 26.5
Duzib235G0273 Durio zibethinus HOM05D003357 ORTHO05D003779 1.8e-06 57.4 166 25.9
Gorai.009G147200 Gossypium raimondii HOM05D003357 ORTHO05D003779 2.4e-06 57.0 153 27.5
Nitab4.5_0003987g0080 Nicotiana tabacum HOM05D003357 ORTHO05D003779 3.1e-06 56.6 169 24.9
CANSAT56G4096 Cannabis sativa HOM05D003357 ORTHO05D003779 4.0e-06 56.2 133 29.3
QL05p001541 Quercus lobata HOM05D003357 ORTHO05D003779 4.0e-06 56.2 152 25.7
QL05p001815 Quercus lobata HOM05D003357 ORTHO05D003779 4.0e-06 56.2 152 25.7
Nn1g08556 Nelumbo nucifera HOM05D003357 ORTHO05D003779 6.9e-06 55.5 68 47.1


User provided reference genes

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