Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.G9AJXB Arachis hypogaea HOM05D000797 ORTHO05D019786 4.4e-33 144.1 73 100.0
arahy.Tifrunner.gnm1.ann1.632TA6 Arachis hypogaea HOM05D000797 ORTHO05D007726 1.2e-30 136.0 73 95.9
arahy.Tifrunner.gnm1.ann1.BZZQ7R Arachis hypogaea HOM05D000797 ORTHO05D007726 3.4e-17 91.3 69 71.0
arahy.Tifrunner.gnm1.ann1.YC35GQ Arachis hypogaea HOM05D004309 ORTHO05D007726 3.4e-17 91.3 69 71.0
arahy.Tifrunner.gnm1.ann1.W1BVEK Arachis hypogaea HOM05D000797 ORTHO05D007726 1.3e-16 89.4 69 72.5
Medtr4g120220 Medicago truncatula HOM05D000797 ORTHO05D007726 7.0e-15 83.6 69 63.8
Psat4g026280 Pisum sativum HOM05D000797 ORTHO05D007726 7.0e-15 83.6 69 63.8
Ca_21482_v3 Cicer arietinum L. HOM05D000797 ORTHO05D007726 9.2e-15 83.2 69 62.3
Eucgr.H03953 Eucalyptus grandis HOM05D000797 ORTHO05D007726 1.6e-14 82.4 69 62.3
COL.COLO4_13828 Corchorus olitorius HOM05D005069 ORTHO05D006024 2.0e-14 82.0 69 60.9
TPR.G3182 Trifolium pratense HOM05D000797 ORTHO05D007726 2.0e-14 82.0 69 60.9
Glyma.07G246000 Glycine max HOM05D000797 ORTHO05D007726 2.7e-14 81.6 69 58.0
Gohir.A09G237700 Gossypium hirsutum HOM05D000797 ORTHO05D007726 3.5e-14 81.3 69 60.9
Gohir.D09G238600 Gossypium hirsutum HOM05D000797 ORTHO05D007726 3.5e-14 81.3 69 60.9
Gorai.006G261300 Gossypium raimondii HOM05D000797 ORTHO05D007726 3.5e-14 81.3 69 60.9
Sabra10G0007300 Salix brachista HOM05D000797 ORTHO05D007726 4.6e-14 80.9 69 60.9
THA.LOC104818913 Tarenaya hassleriana HOM05D000797 ORTHO05D007726 7.8e-14 80.1 69 60.9
CANSAT78G2398 Cannabis sativa HOM05D000797 ORTHO05D007726 1.0e-13 79.7 69 62.3
Cpa.g.sc50.171 Carica papaya HOM05D000797 ORTHO05D007726 1.0e-13 79.7 69 60.9
CsaV3_3G014830 Cucumis sativus L. HOM05D000797 ORTHO05D007726 1.0e-13 79.7 69 59.4
Phvul.003G106700 Phaseolus vulgaris HOM05D000797 ORTHO05D007726 1.3e-13 79.3 69 58.0
VMungo1215G0560 Vigna mungo HOM05D000797 ORTHO05D007726 1.3e-13 79.3 69 58.0
CiPaw.01G145900 Carya illinoinensis HOM05D000797 ORTHO05D007726 1.7e-13 79.0 69 60.9
Glyma.17G028000 Glycine max HOM05D000797 ORTHO05D007726 1.7e-13 79.0 69 58.0
Thecc.04G288000 Theobroma cacao HOM05D000797 ORTHO05D007726 1.7e-13 79.0 69 59.4
Cfa014702 Carpinus fangiana HOM05D000797 ORTHO05D007726 2.3e-13 78.6 69 60.9
MELO3C006679.2 Cucumis melo HOM05D000797 ORTHO05D007726 2.3e-13 78.6 69 58.0
Lalb_Chr12g0196651 Lupinus albus HOM05D000797 ORTHO05D007726 2.9e-13 78.2 67 62.7
ClCG05G006220 Citrullus lanatus HOM05D000797 ORTHO05D007726 3.9e-13 77.8 69 58.0
Lj4g0021722 Lotus japonicus HOM05D004309 ORTHO05D007726 3.9e-13 77.8 69 60.9
Nitab4.5_0005312g0020 Nicotiana tabacum HOM05D000797 ORTHO05D007726 3.9e-13 77.8 67 62.7
Haze_13326 Corylus avellana HOM05D000797 ORTHO05D007726 5.0e-13 77.4 69 59.4
FvH4_4g18561 Fragaria vesca HOM05D000797 ORTHO05D007726 6.6e-13 77.0 69 56.5
FAN07G0695 Fragaria x ananassa HOM05D005069 ORTHO05D006024 6.6e-13 77.0 69 56.5
PGR004G0333 Punica granatum HOM05D000797 ORTHO05D007726 6.6e-13 77.0 69 59.4
arahy.Tifrunner.gnm1.ann1.FKP2UG Arachis hypogaea HOM05D001367 ORTHO05D019786 8.6e-13 76.6 44 86.4
C03p42490 Brassica napus HOM05D000797 ORTHO05D007726 8.6e-13 76.6 69 58.0
BolC3t16519H Brassica oleracea HOM05D000797 ORTHO05D007726 8.6e-13 76.6 69 58.0
Sp3g05810 Schrenkiella parvula HOM05D000797 ORTHO05D007726 8.6e-13 76.6 69 58.0
Sed0017832 Sechium edule HOM05D000797 ORTHO05D007726 8.6e-13 76.6 69 56.5
A03p34910 Brassica napus HOM05D000797 ORTHO05D007726 1.1e-12 76.3 69 56.5
BraA03t12671Z Brassica rapa HOM05D000797 ORTHO05D007726 1.1e-12 76.3 69 56.5
Thhalv10020615m.g Eutrema salsugineum HOM05D000797 ORTHO05D007726 1.1e-12 76.3 69 56.5
Os01g0314100 Oryza sativa ssp. japonica HOM05D000797 ORTHO05D007726 1.1e-12 76.3 68 61.8
Potri.010G011300 Populus trichocarpa HOM05D000797 ORTHO05D007726 1.1e-12 76.3 69 59.4
AL3G17970 Arabidopsis lyrata HOM05D000797 ORTHO05D007726 1.5e-12 75.9 69 58.0
AT3G06850 Arabidopsis thaliana HOM05D000797 ORTHO05D007726 1.5e-12 75.9 69 58.0
EL10Ac3g06632 Beta vulgaris HOM05D000797 ORTHO05D007726 1.5e-12 75.9 69 58.0
CAN.G1137.1 Capsicum annuum HOM05D000797 ORTHO05D007726 1.9e-12 75.5 69 60.9
CARHR081460 Cardamine hirsuta HOM05D000797 ORTHO05D007726 1.9e-12 75.5 69 58.0
Ciclev10004761m.g Citrus clementina HOM05D000797 ORTHO05D007726 1.9e-12 75.5 69 56.5
RcHm_v2.0_Chr4g0423151 Rosa chinensis HOM05D000797 ORTHO05D007726 1.9e-12 75.5 69 56.5
Solyc01g066520.3 Solanum lycopersicum HOM05D000797 ORTHO05D007726 1.9e-12 75.5 69 60.9
Sopen01g028100 Solanum pennellii HOM05D000797 ORTHO05D007726 1.9e-12 75.5 69 60.9
PGSC0003DMG400011330 Solanum tuberosum HOM05D000797 ORTHO05D007726 1.9e-12 75.5 69 60.9
Prupe.1G132500 Prunus persica HOM05D000797 ORTHO05D007726 4.3e-12 74.3 69 58.0
QL06p010151 Quercus lobata HOM05D000797 ORTHO05D007726 4.3e-12 74.3 69 56.5
Lj6A680T85 Lonicera japonica HOM05D000797 ORTHO05D007726 5.6e-12 73.9 69 59.4
TWI09G1463 Tripterygium wilfordii HOM05D000797 ORTHO05D007726 5.6e-12 73.9 69 56.5
Atru.chr4.2892 Acer truncatum HOM05D000797 ORTHO05D007726 7.3e-12 73.6 69 56.5
Carub.0003s0638 Capsella rubella HOM05D000797 ORTHO05D007726 7.3e-12 73.6 69 56.5
Manes.03G198100 Manihot esculenta HOM05D000797 ORTHO05D007726 7.3e-12 73.6 69 58.0
SalBow2G1825 Salvia bowleyana HOM05D000797 ORTHO05D007726 7.3e-12 73.6 71 54.9
unitig_748.g8725 Utricularia gibba HOM05D000797 ORTHO05D007726 7.3e-12 73.6 69 59.4
PSO832G1872 Papaver somniferum HOM05D000797 ORTHO05D007726 9.5e-12 73.2 69 59.4
SGA_v2.0_scaffold67G22605 Striga asiatica HOM05D000797 ORTHO05D007726 9.5e-12 73.2 69 56.5
TWI73G1204 Tripterygium wilfordii HOM05D000797 ORTHO05D007726 9.5e-12 73.2 69 55.1
Peaxi162Scf00065g01524 Petunia axillaris HOM05D000797 ORTHO05D007726 1.2e-11 72.8 69 58.0
Hund20525 Selenicereus undatus HOM05D000797 ORTHO05D007726 1.6e-11 72.4 69 58.0
Aqoxy5G00779 Aquilegia oxysepala HOM05D000797 ORTHO05D007726 2.1e-11 72.0 68 58.8
AUR62032016 Chenopodium quinoa HOM05D000797 ORTHO05D007726 2.1e-11 72.0 68 54.4
Potri.008G219700 Populus trichocarpa HOM05D000797 ORTHO05D007726 2.1e-11 72.0 66 57.6
Hma1.2p1_0804F.1_g221000 Hydrangea macrophylla HOM05D000797 ORTHO05D007726 2.8e-11 71.6 69 56.5
Hma1.2p1_0804F.1_g221010 Hydrangea macrophylla HOM05D000797 ORTHO05D007726 2.8e-11 71.6 69 56.5
PSO210G3438 Papaver somniferum HOM05D000797 ORTHO05D007726 2.8e-11 71.6 69 58.0
GSVIVG01035121001 Vitis vinifera HOM05D000797 ORTHO05D007726 3.6e-11 71.2 69 55.1
Nn3g21531 Nelumbo nucifera HOM05D000797 ORTHO05D007726 4.7e-11 70.9 69 58.0
Ah.04g153650 Amaranthus hybridus HOM05D000797 ORTHO05D007726 6.1e-11 70.5 67 58.2
Dinv44356 Davidia involucrata HOM05D000797 ORTHO05D007726 8.0e-11 70.1 69 56.5
Nitab4.5_0000695g0030 Nicotiana tabacum HOM05D000797 ORTHO05D007726 8.0e-11 70.1 65 60.0
MSTRG.10111 Avicennia marina HOM05D000797 ORTHO05D007726 1.0e-10 69.7 69 55.1
DCAR_027056 Daucus carota HOM05D004309 ORTHO05D005588 1.4e-10 69.3 69 56.5
MD13G1165700 Malus domestica HOM05D000797 ORTHO05D007726 1.4e-10 69.3 69 55.1
Sc13g0003290 Simmondsia chinensis HOM05D000797 ORTHO05D007726 1.4e-10 69.3 69 53.6
Zm00001eb130640 Zea mays HOM05D000797 ORTHO05D007726 1.4e-10 69.3 69 56.5
Actinidia19577 Actinidia chinensis HOM05D000797 ORTHO05D007726 1.8e-10 68.9 69 55.1
Actinidia40296 Actinidia chinensis HOM05D000797 ORTHO05D007726 1.8e-10 68.9 69 55.1
vmacro08180 Vaccinium macrocarpon HOM05D000797 ORTHO05D007726 1.8e-10 68.9 69 55.1
CDE12G0277 Ceratophyllum demersum HOM05D000797 ORTHO05D007726 2.3e-10 68.6 69 58.0
TAR362G0149 Trochodendron aralioides HOM05D001727 ORTHO05D007726 3.1e-10 68.2 69 55.1
CSS0044303 Camellia sinensis var. sinensis HOM05D000797 ORTHO05D007726 5.2e-10 67.4 69 53.6
Lsat_1_v5_gn_3_24121 Lactuca sativa HOM05D000797 ORTHO05D007726 8.9e-10 66.6 69 53.6
Cc03_g01610 Coffea canephora HOM05D000797 ORTHO05D007726 1.2e-09 66.2 69 53.6
ECA246G2476 Erigeron canadensis HOM05D000797 ORTHO05D007726 2.0e-09 65.5 69 52.2
Migut.G00134 Erythranthe guttata HOM05D000797 ORTHO05D007726 2.0e-09 65.5 67 55.2
HanXRQChr17g0536081 Helianthus annuus HOM05D000797 ORTHO05D007726 2.6e-09 65.1 69 52.2
MBI19_g34790_MAGBIO Magnolia biondii HOM05D000797 ORTHO05D007726 5.8e-09 63.9 68 54.4
Rhsim04G0224800 Rhododendron simsii HOM05D000797 ORTHO05D007726 5.8e-09 63.9 69 52.2
ATR0796G192 Amborella trichopoda HOM05D000797 ORTHO05D007726 1.7e-08 62.4 69 50.7
HPP92_002152 Vanilla planifolia HOM05D000797 ORTHO05D007726 4.9e-08 60.8 69 49.3
HPP92_002232 Vanilla planifolia HOM05D000797 ORTHO05D007726 6.4e-08 60.5 69 49.3
arahy.Tifrunner.gnm1.ann1.G32VP9 Arachis hypogaea HOM05D000797 ORTHO05D019786 7.0e-07 57.0 36 77.8
Duzib212G0824 Durio zibethinus HOM05D000797 ORTHO05D007726 1.6e-06 55.8 30 86.7
Pp3c7_200 Physcomitrium patens HOM05D000797 ORTHO05D007726 3.5e-06 54.7 69 47.8
Mapoly0127s0040 Marchantia polymorpha HOM05D000797 ORTHO05D007726 6.0e-06 53.9 69 44.9


User provided reference genes

Program Settings