Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.G6M6JD Arachis hypogaea HOM05D004801 ORTHO05D005747 1.9e-123 446.0 261 100.0
arahy.Tifrunner.gnm1.ann1.KJ31KE Arachis hypogaea HOM05D004801 ORTHO05D005747 1.8e-121 439.5 261 98.1
Lalb_Chr14g0366971 Lupinus albus HOM05D004801 ORTHO05D005747 5.9e-48 195.3 265 48.7
Lalb_Chr24g0399901 Lupinus albus HOM05D004801 ORTHO05D005747 1.1e-46 191.0 262 46.6
VMungo0464G0320 Vigna mungo HOM05D004801 ORTHO05D005747 7.2e-46 188.3 262 49.2
Glyma.12G204600 Glycine max HOM05D004801 ORTHO05D005747 6.1e-45 185.3 261 49.8
Glyma.13G296700 Glycine max HOM05D004801 ORTHO05D005747 1.8e-44 183.7 257 51.8
Glyma.12G204500 Glycine max HOM05D004801 ORTHO05D005747 8.8e-44 181.4 258 48.8
VMungo0464G1438 Vigna mungo HOM05D004801 ORTHO05D005747 1.1e-41 174.5 259 56.8
Lj3g0028176 Lotus japonicus HOM05D004801 ORTHO05D005747 2.4e-41 173.3 263 47.1
Phvul.004G108100 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 4.5e-40 169.1 261 53.3
ClCG00G003550 Citrullus lanatus HOM05D004801 ORTHO05D005747 2.5e-38 163.3 261 44.1
ClCG07G002870 Citrullus lanatus HOM05D004801 ORTHO05D005747 2.5e-38 163.3 261 44.1
Phvul.004G108200 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 2.1e-37 160.2 262 45.4
Manes.13G146300 Manihot esculenta HOM05D004801 ORTHO05D005747 1.4e-36 157.5 284 42.3
Ca_01496_v3 Cicer arietinum L. HOM05D004801 ORTHO05D005747 3.0e-36 156.4 261 46.4
CsaV3_7G004470 Cucumis sativus L. HOM05D004801 ORTHO05D005747 1.2e-35 154.5 267 41.2
MELO3C018732.2 Cucumis melo HOM05D004801 ORTHO05D005747 3.4e-35 152.9 267 41.6
Thecc.02G180400 Theobroma cacao HOM05D004801 ORTHO05D005747 9.8e-35 151.4 260 45.4
Sed0013547 Sechium edule HOM05D004801 ORTHO05D005747 2.2e-34 150.2 263 40.3
Sc21g0002890 Simmondsia chinensis HOM05D004801 ORTHO05D005747 2.2e-34 150.2 268 41.4
Hma1.2p1_0002F.1_g001940 Hydrangea macrophylla HOM05D004801 ORTHO05D005747 4.9e-34 149.1 266 48.9
Cfa014619 Carpinus fangiana HOM05D004801 ORTHO05D005747 8.3e-34 148.3 265 43.8
Duzib132G1264 Durio zibethinus HOM05D004801 ORTHO05D005747 1.8e-33 147.1 261 39.5
Gohir.A03G156300 Gossypium hirsutum HOM05D004801 ORTHO05D005747 1.8e-33 147.1 264 39.4
unitig_46.g18595 Utricularia gibba HOM05D004801 ORTHO05D005747 2.4e-33 146.7 226 41.2
CSS0019593 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 3.2e-33 146.4 271 45.8
Oeu019133.1 Olea europaea HOM05D004801 ORTHO05D005747 3.2e-33 146.4 235 43.4
COL.COLO4_30200 Corchorus olitorius HOM05D004801 ORTHO05D005747 4.1e-33 146.0 262 46.6
Gorai.005G201200 Gossypium raimondii HOM05D004801 ORTHO05D005747 9.2e-33 144.8 269 36.4
EL10Ac9g20770 Beta vulgaris HOM05D004801 ORTHO05D005747 1.6e-32 144.1 271 44.3
Sed0002865 Sechium edule HOM05D004801 ORTHO05D005747 1.6e-32 144.1 262 48.5
TPR.G6396 Trifolium pratense HOM05D004801 ORTHO05D005747 1.6e-32 144.1 259 45.9
MD17G1239900 Malus domestica HOM05D004801 ORTHO05D005747 3.5e-32 142.9 264 40.9
TWI36G1772 Tripterygium wilfordii HOM05D004801 ORTHO05D005747 4.6e-32 142.5 263 48.7
Gohir.D02G179400 Gossypium hirsutum HOM05D004801 ORTHO05D005747 1.0e-31 141.4 264 45.1
vmacro12308 Vaccinium macrocarpon HOM05D004801 ORTHO05D005747 1.0e-31 141.4 264 46.6
Medtr2g090385 Medicago truncatula HOM05D004801 ORTHO05D005747 1.3e-31 141.0 263 47.5
Gohir.A04G103500 Gossypium hirsutum HOM05D004801 ORTHO05D005747 2.3e-31 140.2 80 81.2
SGA_v2.0_scaffold34G13950 Striga asiatica HOM05D004801 ORTHO05D005747 2.3e-31 140.2 239 44.4
CiPaw.03G177800 Carya illinoinensis HOM05D004801 ORTHO05D005747 3.0e-31 139.8 261 41.0
Haze_13169 Corylus avellana HOM05D004801 ORTHO05D005747 3.0e-31 139.8 268 42.9
Glyma.13G296800 Glycine max HOM05D004801 ORTHO05D005747 3.9e-31 139.4 110 67.3
MSTRG.14326 Avicennia marina HOM05D004801 ORTHO05D005747 5.0e-31 139.0 177 45.2
TAR626G1782 Trochodendron aralioides HOM05D004801 ORTHO05D005747 5.0e-31 139.0 286 36.7
QL08p038965 Quercus lobata HOM05D004801 ORTHO05D005747 6.6e-31 138.7 265 40.4
Prupe.3G132500 Prunus persica HOM05D004801 ORTHO05D005747 1.1e-30 137.9 257 43.2
GSVIVG01020552001 Vitis vinifera HOM05D004801 ORTHO05D005747 1.1e-30 137.9 93 68.8
Ah.08g215280 Amaranthus hybridus HOM05D004801 ORTHO05D005747 1.5e-30 137.5 263 39.5
Actinidia11029 Actinidia chinensis HOM05D004801 ORTHO05D005747 1.9e-30 137.1 243 43.2
Psat5g270840 Pisum sativum HOM05D004801 ORTHO05D005747 1.9e-30 137.1 259 47.1
RcHm_v2.0_Chr2g0126621 Rosa chinensis HOM05D004801 ORTHO05D005747 1.9e-30 137.1 249 39.4
Rhsim06G0141800 Rhododendron simsii HOM05D004801 ORTHO05D005747 2.5e-30 136.7 175 58.9
AUR62040063 Chenopodium quinoa HOM05D004801 ORTHO05D005747 3.3e-30 136.3 280 48.6
ECA234G0944 Erigeron canadensis HOM05D004801 ORTHO05D005747 5.6e-30 135.6 207 45.4
SGA_v2.0_scaffold70G23526 Striga asiatica HOM05D004801 ORTHO05D005747 5.6e-30 135.6 259 42.9
Duzib248G0607 Durio zibethinus HOM05D004801 ORTHO05D005747 9.5e-30 134.8 258 38.8
Dinv26411 Davidia involucrata HOM05D004801 ORTHO05D005747 1.2e-29 134.4 87 71.3
FAN02G2956 Fragaria x ananassa HOM05D004801 ORTHO05D005747 1.2e-29 134.4 86 73.3
Lsat_1_v5_gn_8_135921 Lactuca sativa HOM05D004801 ORTHO05D005747 1.2e-29 134.4 275 46.2
Sopen10g004180 Solanum pennellii HOM05D004801 ORTHO05D005747 1.2e-29 134.4 258 38.4
HanXRQChr17g0559281 Helianthus annuus HOM05D004801 ORTHO05D005747 1.6e-29 134.0 90 71.1
SHI10398 Sapria himalayana HOM05D004801 ORTHO05D005747 2.1e-29 133.7 98 64.3
FvH4_6g26250 Fragaria vesca HOM05D004801 ORTHO05D005747 3.6e-29 132.9 86 72.1
Gohir.D04G142900 Gossypium hirsutum HOM05D004801 ORTHO05D005747 3.6e-29 132.9 256 47.3
Cpa.g.sc34.170 Carica papaya HOM05D004801 ORTHO05D005747 4.7e-29 132.5 201 39.8
Atru.chr6.2990 Acer truncatum HOM05D004801 ORTHO05D005747 6.2e-29 132.1 263 44.5
Dinv23632 Davidia involucrata HOM05D004801 ORTHO05D005747 8.0e-29 131.7 284 45.1
Gorai.012G128300 Gossypium raimondii HOM05D004801 ORTHO05D005747 1.0e-28 131.3 256 47.3
Migut.M00296 Erythranthe guttata HOM05D004801 ORTHO05D005747 1.4e-28 131.0 266 47.7
Nitab4.5_0011784g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 1.4e-28 131.0 261 45.2
HPP92_008364 Vanilla planifolia HOM05D004801 ORTHO05D005747 1.4e-28 131.0 92 67.4
CSS0042810 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 1.8e-28 130.6 255 36.9
AUR62022461 Chenopodium quinoa HOM05D004801 ORTHO05D005747 1.8e-28 130.6 275 38.5
Cc05_g07190 Coffea canephora HOM05D004801 ORTHO05D005747 2.3e-28 130.2 258 41.1
PGSC0003DMG400013144 Solanum tuberosum HOM05D004801 ORTHO05D005747 3.1e-28 129.8 257 37.0
BraA01t01904Z Brassica rapa HOM05D004801 ORTHO05D005747 5.2e-28 129.0 208 38.0
Solyc10g008320.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 5.2e-28 129.0 269 37.9
BraA08t33972Z Brassica rapa HOM05D004801 ORTHO05D005747 8.9e-28 128.3 258 37.6
BcaC09g50492 Brassica carinata HOM05D004801 ORTHO05D005747 1.2e-27 127.9 209 39.7
FAN09G3815 Fragaria x ananassa HOM05D004801 ORTHO05D005747 1.2e-27 127.9 70 80.0
Sp7g26270 Schrenkiella parvula HOM05D004801 ORTHO05D005747 1.2e-27 127.9 258 36.4
Nitab4.5_0000585g0130 Nicotiana tabacum HOM05D004801 ORTHO05D005747 2.0e-27 127.1 90 67.8
Sabra13G0110300 Salix brachista HOM05D004801 ORTHO05D005747 2.0e-27 127.1 215 49.8
A08p20130 Brassica napus HOM05D004801 ORTHO05D005747 2.6e-27 126.7 173 43.9
BolC1t02426H Brassica oleracea HOM05D004801 ORTHO05D005747 2.6e-27 126.7 209 37.8
CAN.G578.5 Capsicum annuum HOM05D004801 ORTHO05D005747 4.4e-27 125.9 110 58.2
Ciclev10016785m.g Citrus clementina HOM05D004801 ORTHO05D005747 5.8e-27 125.6 95 63.2
Aqoxy4G01981 Aquilegia oxysepala HOM05D004801 ORTHO05D005747 9.8e-27 124.8 78 66.7
AT4G28310 Arabidopsis thaliana HOM05D004801 ORTHO05D005747 9.8e-27 124.8 259 35.9
C01p24790 Brassica napus HOM05D004801 ORTHO05D005747 9.8e-27 124.8 209 37.3
BcaC07g38324 Brassica carinata HOM05D004801 ORTHO05D005747 1.3e-26 124.4 258 36.4
C08p10790 Brassica napus HOM05D004801 ORTHO05D005747 1.3e-26 124.4 258 36.4
BcaB03g12566 Brassica carinata HOM05D004801 ORTHO05D005747 2.9e-26 123.2 173 43.4
Lsat_1_v5_gn_8_135941 Lactuca sativa HOM05D004801 ORTHO05D005747 3.7e-26 122.9 68 77.9
DCAR_013013 Daucus carota HOM05D004801 ORTHO05D005747 4.9e-26 122.5 256 36.3
SalBow1G1046 Salvia bowleyana HOM05D004801 ORTHO05D005747 4.9e-26 122.5 80 67.5
MSTRG.12824 Avicennia marina HOM05D004801 ORTHO05D005747 6.4e-26 122.1 256 34.8
BolC8t48753H Brassica oleracea HOM05D004801 ORTHO05D005747 6.4e-26 122.1 268 36.2
Thhalv10027270m.g Eutrema salsugineum HOM05D004801 ORTHO05D005747 6.4e-26 122.1 260 35.8
unitig_37.g12306 Utricularia gibba HOM05D004801 ORTHO05D005747 6.4e-26 122.1 231 37.7
Potri.013G130700 Populus trichocarpa HOM05D004801 ORTHO05D005747 2.4e-25 120.2 207 50.7
Psat5g272360 Pisum sativum HOM05D004801 ORTHO05D005747 3.2e-25 119.8 264 42.0
SalBow1G6004 Salvia bowleyana HOM05D004801 ORTHO05D005747 3.2e-25 119.8 256 35.9
BcaNung01577 Brassica carinata HOM05D004801 ORTHO05D005747 4.1e-25 119.4 236 34.3
Nitab4.5_0014741g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 4.1e-25 119.4 259 38.2
Aa31LG2G22170 Aethionema arabicum HOM05D004801 ORTHO05D005747 2.0e-24 117.1 174 39.7
CARHR236030 Cardamine hirsuta HOM05D004801 ORTHO05D005747 3.5e-24 116.3 258 34.1
MBI18_g28947_MAGBIO Magnolia biondii HOM05D004801 ORTHO05D005747 4.6e-24 115.9 74 68.9
Peaxi162Scf00132g00008 Petunia axillaris HOM05D004801 ORTHO05D005747 4.6e-24 115.9 81 67.9
AL7G24290 Arabidopsis lyrata HOM05D004801 ORTHO05D005747 7.8e-24 115.2 259 39.8
Nitab4.5_0000638g0250 Nicotiana tabacum HOM05D004801 ORTHO05D005747 7.8e-24 115.2 256 37.5
Peaxi162Scf00059g00194 Petunia axillaris HOM05D004801 ORTHO05D005747 7.8e-24 115.2 261 38.3
THA.LOC104824700 Tarenaya hassleriana HOM05D004801 ORTHO05D005747 1.0e-23 114.8 180 39.4
Aa31LG10G480 Aethionema arabicum HOM05D004801 ORTHO05D005747 1.3e-23 114.4 174 40.2
Eucgr.A01822 Eucalyptus grandis HOM05D004801 ORTHO05D005747 1.3e-23 114.4 283 44.5
PGSC0003DMG400018341 Solanum tuberosum HOM05D004801 ORTHO05D005747 2.3e-23 113.6 114 55.3
PGR042G3918 Punica granatum HOM05D004801 ORTHO05D005747 3.0e-23 113.2 278 44.6
Sopen07g027930 Solanum pennellii HOM05D004801 ORTHO05D005747 3.9e-23 112.8 114 54.4
Carub.0007s1244 Capsella rubella HOM05D004801 ORTHO05D005747 5.0e-23 112.5 202 41.1
BcaC06g32627 Brassica carinata HOM05D004801 ORTHO05D005747 6.6e-23 112.1 174 40.2
BcaC06g32628 Brassica carinata HOM05D004801 ORTHO05D005747 6.6e-23 112.1 174 40.2
Os06g0115700 Oryza sativa ssp. japonica HOM05D004801 ORTHO05D005747 8.6e-23 111.7 91 58.2
Zm00001eb269130 Zea mays HOM05D004801 ORTHO05D005747 1.1e-22 111.3 74 68.9
Solyc07g053950.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 7.3e-22 108.6 109 52.3
ATR0124G030 Amborella trichopoda HOM05D004801 ORTHO05D005747 1.2e-21 107.8 79 62.0
C07p56130 Brassica napus HOM05D004801 ORTHO05D005747 8.1e-21 105.1 109 49.5
Lj1P721T18 Lonicera japonica HOM05D004801 ORTHO05D005747 1.1e-20 104.8 75 65.3
Mapoly0078s0017 Marchantia polymorpha HOM05D004801 ORTHO05D005747 1.4e-20 104.4 122 45.9
A03p58010 Brassica napus HOM05D004801 ORTHO05D005747 4.0e-20 102.8 174 36.8
BraA03t14864Z Brassica rapa HOM05D004801 ORTHO05D005747 4.0e-20 102.8 174 36.8
PSO170G5688 Papaver somniferum HOM05D004801 ORTHO05D005747 4.0e-20 102.8 310 40.6
Pp3c17_13330 Physcomitrium patens HOM05D004801 ORTHO05D005747 4.0e-20 102.8 78 61.5
PSO357G0555 Papaver somniferum HOM05D004801 ORTHO05D005747 7.5e-19 98.6 278 41.4
Pp3c14_12710 Physcomitrium patens HOM05D004801 ORTHO05D005747 1.3e-18 97.8 78 57.7
BolC7t46088H Brassica oleracea HOM05D004801 ORTHO05D005747 2.2e-18 97.1 177 36.2
SEGI_29524 Sequoiadendron giganteum HOM05D004801 ORTHO05D005747 6.4e-18 95.5 266 30.8
AagrBONN_evm.TU.Sc2ySwM_344.3370 Anthoceros agrestis HOM05D004801 ORTHO05D005747 1.0e-15 88.2 78 55.1
BcaNung01357 Brassica carinata HOM05D004801 ORTHO05D005747 4.9e-10 69.3 45 60.0
SalBow7G4382 Salvia bowleyana HOM05D004801 ORTHO05D005747 2.7e-08 63.5 229 29.7
AT1G52270 Arabidopsis thaliana HOM05D004801 ORTHO05D005747 4.3e-06 56.2 44 50.0
BcaC08g44096 Brassica carinata HOM05D004801 ORTHO05D005747 4.3e-06 56.2 73 43.8
SalBow7G4186 Salvia bowleyana HOM05D000074 ORTHO05D000220 9.6e-06 55.1 32 71.9


User provided reference genes

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