Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.G6707F Arachis hypogaea HOM05D006997 ORTHO05D008713 2.2e-114 415.6 204 100.0
arahy.Tifrunner.gnm1.ann1.I4BPU4 Arachis hypogaea HOM05D006997 ORTHO05D008713 2.0e-75 286.2 227 67.0
arahy.Tifrunner.gnm1.ann1.M6BDRX Arachis hypogaea HOM05D006997 ORTHO05D008713 5.8e-75 284.6 255 62.0
arahy.Tifrunner.gnm1.ann1.50RG73 Arachis hypogaea HOM05D006997 ORTHO05D008713 1.7e-74 283.1 245 63.3
arahy.Tifrunner.gnm1.ann1.2V06JV Arachis hypogaea HOM05D006997 ORTHO05D008713 4.9e-74 281.6 245 62.9
Medtr5g099370 Medicago truncatula HOM05D006997 ORTHO05D008713 1.5e-70 270.0 245 59.6
GSVIVG01009084001 Vitis vinifera HOM05D006997 ORTHO05D008713 1.3e-69 266.9 245 59.6
TWI56G0051 Tripterygium wilfordii HOM05D006997 ORTHO05D008713 2.1e-69 266.2 245 59.6
COL.COLO4_12006 Corchorus olitorius HOM05D006997 ORTHO05D008713 2.8e-69 265.8 245 59.2
Atru.chr13.1117 Acer truncatum HOM05D006997 ORTHO05D008713 4.8e-69 265.0 245 60.0
arahy.Tifrunner.gnm1.ann1.U0EC22 Arachis hypogaea HOM05D006997 ORTHO05D008713 4.8e-69 265.0 237 62.0
Manes.02G149000 Manihot esculenta HOM05D006997 ORTHO05D008713 6.2e-69 264.6 245 58.8
CiPaw.15G045900 Carya illinoinensis HOM05D006997 ORTHO05D008713 1.1e-68 263.8 245 59.2
Actinidia30795 Actinidia chinensis HOM05D006997 ORTHO05D008713 2.4e-68 262.7 247 59.9
CANSAT54G2489 Cannabis sativa HOM05D006997 ORTHO05D008713 2.4e-68 262.7 245 58.8
arahy.Tifrunner.gnm1.ann1.I3UG1J Arachis hypogaea HOM05D006997 ORTHO05D008713 6.9e-68 261.2 231 63.6
Ciclev10001423m.g Citrus clementina HOM05D006997 ORTHO05D008713 6.9e-68 261.2 245 58.0
Actinidia10345 Actinidia chinensis HOM05D006997 ORTHO05D008713 9.0e-68 260.8 245 59.6
Nn5g29994 Nelumbo nucifera HOM05D006997 ORTHO05D008713 9.0e-68 260.8 245 59.2
Peaxi162Scf00030g02415 Petunia axillaris HOM05D006997 ORTHO05D008713 9.0e-68 260.8 245 58.8
Duzib093G0368 Durio zibethinus HOM05D006997 ORTHO05D008713 1.5e-67 260.0 247 58.7
Prupe.1G523100 Prunus persica HOM05D006997 ORTHO05D008713 1.5e-67 260.0 245 58.4
CSS0033006 Camellia sinensis var. sinensis HOM05D006997 ORTHO05D008713 2.0e-67 259.6 245 58.8
HanXRQChr02g0039281 Helianthus annuus HOM05D006997 ORTHO05D008713 2.0e-67 259.6 245 56.7
CAN.G857.15 Capsicum annuum HOM05D006997 ORTHO05D008713 4.4e-67 258.5 245 58.8
PGSC0003DMG400030838 Solanum tuberosum HOM05D006997 ORTHO05D008713 4.4e-67 258.5 245 58.0
Cc10_g06680 Coffea canephora HOM05D006997 ORTHO05D008713 7.6e-67 257.7 245 58.4
Lj1g0014637 Lotus japonicus HOM05D006997 ORTHO05D008713 9.9e-67 257.3 245 58.8
Potri.002G100700 Populus trichocarpa HOM05D006997 ORTHO05D008713 9.9e-67 257.3 245 58.0
DCAR_012882 Daucus carota HOM05D006997 ORTHO05D008713 1.3e-66 256.9 219 62.1
ATR0684G208 Amborella trichopoda HOM05D006997 ORTHO05D008713 2.9e-66 255.8 245 58.4
MBI02_g10710_MAGBIO Magnolia biondii HOM05D006997 ORTHO05D008713 3.8e-66 255.4 245 57.6
Nitab4.5_0005108g0030 Nicotiana tabacum HOM05D006997 ORTHO05D008713 3.8e-66 255.4 250 56.4
Sopen04g029680 Solanum pennellii HOM05D006997 ORTHO05D008713 3.8e-66 255.4 245 58.0
Lalb_Chr08g0242211 Lupinus albus HOM05D006997 ORTHO05D008713 4.9e-66 255.0 245 59.2
ClCG11G014320 Citrullus lanatus HOM05D006997 ORTHO05D008713 6.4e-66 254.6 227 61.7
Glyma.06G100700 Glycine max HOM05D006997 ORTHO05D008713 6.4e-66 254.6 245 58.0
TPR.G18644 Trifolium pratense HOM05D006997 ORTHO05D008713 1.1e-65 253.8 245 56.7
MD08G1188600 Malus domestica HOM05D006997 ORTHO05D008713 1.4e-65 253.4 245 55.5
Solyc04g074710.3 Solanum lycopersicum HOM05D006997 ORTHO05D008713 1.4e-65 253.4 245 57.6
Eucgr.F00379 Eucalyptus grandis HOM05D006997 ORTHO05D008713 1.9e-65 253.1 247 56.7
TAR381G0945 Trochodendron aralioides HOM05D006997 ORTHO05D008713 1.9e-65 253.1 245 57.1
MELO3C003553.2 Cucumis melo HOM05D006997 ORTHO05D008713 1.6e-64 250.0 245 57.1
CsaV3_3G047700 Cucumis sativus L. HOM05D006997 ORTHO05D008713 2.1e-64 249.6 245 57.1
Migut.O00787 Erythranthe guttata HOM05D006997 ORTHO05D008713 4.6e-64 248.4 245 55.9
RcHm_v2.0_Chr3g0492071 Rosa chinensis HOM05D006997 ORTHO05D008713 1.0e-63 247.3 245 55.9
Thecc.08G101800 Theobroma cacao HOM05D006997 ORTHO05D008713 1.0e-63 247.3 245 57.1
VMungo1309G1562 Vigna mungo HOM05D006997 ORTHO05D008713 1.0e-63 247.3 245 55.9
Gorai.002G141200 Gossypium raimondii HOM05D006997 ORTHO05D008713 2.3e-63 246.1 245 56.7
FvH4_5g36560 Fragaria vesca HOM05D006997 ORTHO05D008713 3.9e-63 245.4 245 56.3
Rhsim06G0078000 Rhododendron simsii HOM05D006997 ORTHO05D008713 6.6e-63 244.6 266 53.0
Gohir.A01G132700 Gossypium hirsutum HOM05D006997 ORTHO05D008713 1.5e-62 243.4 245 55.9
Lsat_1_v5_gn_1_3100 Lactuca sativa HOM05D006997 ORTHO05D008713 2.5e-62 242.7 245 53.9
Phvul.009G033100 Phaseolus vulgaris HOM05D006997 ORTHO05D008713 4.3e-62 241.9 245 55.1
Hund26989 Selenicereus undatus HOM05D006997 ORTHO05D008713 4.3e-62 241.9 245 56.3
Glyma.04G099000 Glycine max HOM05D006997 ORTHO05D008713 1.3e-61 240.4 245 55.9
THA.LOC104806793 Tarenaya hassleriana HOM05D006997 ORTHO05D008713 1.6e-61 240.0 245 53.9
Duzib116G0677 Durio zibethinus HOM05D006997 ORTHO05D008713 3.6e-61 238.8 245 55.1
PSO700G0253 Papaver somniferum HOM05D006997 ORTHO05D008713 1.1e-60 237.3 245 53.9
PSO170G4713 Papaver somniferum HOM05D006997 ORTHO05D008713 1.4e-60 236.9 245 53.5
ECA247G1028 Erigeron canadensis HOM05D006997 ORTHO05D008713 9.0e-60 234.2 242 52.9
HPP92_005985 Vanilla planifolia HOM05D006997 ORTHO05D008713 1.2e-59 233.8 245 55.5
QL02p002364 Quercus lobata HOM05D006997 ORTHO05D008713 3.4e-59 232.3 306 46.4
Cpa.g.sc36.182 Carica papaya HOM05D006997 ORTHO05D008713 9.9e-59 230.7 224 57.1
MD15G1376400 Malus domestica HOM05D006997 ORTHO05D008713 1.7e-58 229.9 129 82.2
Psat2g000280 Pisum sativum HOM05D006997 ORTHO05D008713 6.4e-58 228.0 224 55.8
SalBow1G8133 Salvia bowleyana HOM05D006997 ORTHO05D008713 1.9e-57 226.5 299 46.8
PGR042G3947 Punica granatum HOM05D006997 ORTHO05D008713 9.3e-57 224.2 224 55.8
Sed0013982 Sechium edule HOM05D006997 ORTHO05D008713 9.3e-57 224.2 224 57.6
Gohir.D01G115600 Gossypium hirsutum HOM05D006997 ORTHO05D008713 2.1e-56 223.0 224 56.2
Mapoly0028s0040 Marchantia polymorpha HOM05D006997 ORTHO05D008713 4.6e-56 221.9 245 49.8
CSS0036565 Camellia sinensis var. sinensis HOM05D006997 ORTHO05D008713 1.8e-55 219.9 224 55.8
Haze_18264 Corylus avellana HOM05D006997 ORTHO05D008713 2.3e-55 219.5 223 55.2
FAN08G2563 Fragaria x ananassa HOM05D006997 ORTHO05D008713 5.6e-54 214.9 247 50.6
FAN18G0565 Fragaria x ananassa HOM05D006997 ORTHO05D008713 7.4e-54 214.5 238 52.1
FAN13G2131 Fragaria x ananassa HOM05D006997 ORTHO05D008713 1.3e-53 213.8 238 51.7
Nitab4.5_0000786g0050 Nicotiana tabacum HOM05D006997 ORTHO05D008713 2.8e-53 212.6 245 51.4
vmacro21291 Vaccinium macrocarpon HOM05D006997 ORTHO05D008713 4.8e-53 211.8 336 42.0
Lj4C96G9 Lonicera japonica HOM05D006997 ORTHO05D008713 2.4e-52 209.5 245 51.8
Hma1.2p1_1613F.1_g293656 Hydrangea macrophylla HOM05D006997 ORTHO05D008713 7.6e-51 204.5 218 53.2
PSO447G0258 Papaver somniferum HOM05D006997 ORTHO05D008713 3.5e-48 195.7 224 50.9
Pp3c2_7910 Physcomitrium patens HOM05D006997 ORTHO05D008713 1.8e-47 193.4 129 69.0
AagrBONN_evm.TU.Sc2ySwM_228.3329 Anthoceros agrestis HOM05D006997 ORTHO05D008713 3.9e-47 192.2 129 69.8
SMO203G0247 Selaginella moellendorffii HOM05D006997 ORTHO05D008713 1.5e-46 190.3 221 49.8
Migut.N02878 Erythranthe guttata HOM05D006997 ORTHO05D008713 7.6e-43 177.9 200 53.0
SGA_v2.0_scaffold28G11904 Striga asiatica HOM05D006997 ORTHO05D008713 2.1e-40 169.9 99 78.8
Cre12.g558400 Chlamydomonas reinhardtii HOM05D006997 ORTHO05D008713 7.4e-38 161.4 250 40.0
PRCOL_00000168 Prasinoderma coloniale HOM05D006997 ORTHO05D008713 1.3e-37 160.6 248 36.7
CDE10G0812 Ceratophyllum demersum HOM05D006997 ORTHO05D008713 2.8e-37 159.5 96 76.0
CBR_g19661 Chara braunii HOM05D006997 ORTHO05D008713 3.4e-35 152.5 225 40.9
MCO01G675 Micromonas commoda HOM05D006997 ORTHO05D008713 2.2e-34 149.8 254 37.0
arahy.Tifrunner.gnm1.ann1.L1DSY1 Arachis hypogaea HOM05D006997 ORTHO05D008713 3.2e-33 146.0 245 42.4
SEGI_15027 Sequoiadendron giganteum HOM05D006997 ORTHO05D008713 1.6e-32 143.7 95 71.6
Phvul.001G070300 Phaseolus vulgaris HOM05D006997 ORTHO05D008713 4.3e-30 135.6 159 50.3
Aqoxy5G01920 Aquilegia oxysepala HOM05D006997 ORTHO05D008713 2.4e-28 129.8 166 50.6
Ca_20316_v3 Cicer arietinum L. HOM05D006997 ORTHO05D008713 3.1e-28 129.4 166 45.8
RcHm_v2.0_Chr7g0242251 Rosa chinensis HOM05D006997 ORTHO05D008713 2.6e-27 126.3 70 84.3
Aqoxy605s001 Aquilegia oxysepala HOM05D006997 ORTHO05D008713 1.9e-17 93.6 49 85.7
SHI35102 Sapria himalayana HOM05D006997 ORTHO05D008713 6.7e-15 85.1 115 48.7
SEGI_11145 Sequoiadendron giganteum HOM05D006997 ORTHO05D008713 1.7e-10 70.5 33 97.0
Dinv07073 Davidia involucrata HOM05D006997 ORTHO05D008713 2.9e-10 69.7 33 97.0
Oeu029744.1 Olea europaea HOM05D006997 ORTHO05D008713 2.9e-10 69.7 33 97.0
RcHm_v2.0_Chr7g0242241 Rosa chinensis HOM05D006997 ORTHO05D008713 1.5e-09 67.4 33 93.9
arahy.Tifrunner.gnm1.ann1.R22A6K Arachis hypogaea HOM05D006997 ORTHO05D008713 1.9e-09 67.0 33 93.9
Zm00001eb313370 Zea mays HOM05D006997 ORTHO05D008713 1.9e-09 67.0 35 85.7
Atru.chr12.1704 Acer truncatum HOM05D007440 ORTHO05D009418 9.8e-06 54.7 121 30.6


User provided reference genes

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