Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.G0M71R Arachis hypogaea HOM05D008369 ORTHO05D005932 1.1e-91 340.1 197 100.0
arahy.Tifrunner.gnm1.ann1.7B8RN4 Arachis hypogaea HOM05D008369 ORTHO05D005932 1.9e-86 322.8 205 94.6
Lalb_Chr12g0196981 Lupinus albus HOM05D008369 ORTHO05D005932 7.4e-27 124.8 186 50.5
Medtr4g108990 Medicago truncatula HOM05D008369 ORTHO05D005932 2.2e-26 123.2 196 41.8
Lj4g0010683 Lotus japonicus HOM05D008369 ORTHO05D005932 4.8e-26 122.1 174 52.9
Psat4g049480 Pisum sativum HOM05D008369 ORTHO05D005932 8.8e-20 101.3 173 50.9
TPR.G2001 Trifolium pratense HOM05D008369 ORTHO05D005932 7.4e-19 98.2 211 38.4
Cfa019277 Carpinus fangiana HOM05D008369 ORTHO05D005932 1.7e-18 97.1 193 43.0
Ciclev10022335m.g Citrus clementina HOM05D008369 ORTHO05D005932 1.8e-17 93.6 185 37.3
Glyma.17G102500 Glycine max HOM05D008369 ORTHO05D005932 7.0e-17 91.7 159 40.9
TAR006G0004 Trochodendron aralioides HOM05D009095 ORTHO05D005932 2.0e-16 90.1 178 48.3
MD14G1205100 Malus domestica HOM05D008369 ORTHO05D005932 2.6e-16 89.7 191 45.5
Phvul.003G188100 Phaseolus vulgaris HOM05D008369 ORTHO05D005932 2.6e-16 89.7 167 40.1
Duzib084G1416 Durio zibethinus HOM05D008369 ORTHO05D005932 2.9e-15 86.3 192 36.5
QL10p017723 Quercus lobata HOM05D008369 ORTHO05D005932 3.8e-15 85.9 197 37.6
VMungo1215G3129 Vigna mungo HOM05D008369 ORTHO05D005932 3.8e-15 85.9 183 37.2
Glyma.05G024700 Glycine max HOM05D008369 ORTHO05D005932 1.1e-14 84.3 162 38.9
Sed0006867 Sechium edule HOM05D008369 ORTHO05D005932 1.1e-14 84.3 191 42.9
Haze_07652 Corylus avellana HOM05D008369 ORTHO05D005932 1.5e-14 84.0 185 40.5
MD06G1197700 Malus domestica HOM05D008369 ORTHO05D005932 3.2e-14 82.8 194 44.3
Dinv38746 Davidia involucrata HOM05D008369 ORTHO05D005932 1.6e-13 80.5 187 43.3
Thecc.03G094300 Theobroma cacao HOM05D008369 ORTHO05D005932 1.6e-13 80.5 178 34.8
FvH4_5g14530 Fragaria vesca HOM05D008369 ORTHO05D005932 2.7e-13 79.7 175 41.1
FAN08G2699 Fragaria x ananassa HOM05D008369 ORTHO05D005932 3.6e-13 79.3 174 40.8
FAN18G3211 Fragaria x ananassa HOM05D008369 ORTHO05D005932 3.6e-13 79.3 175 35.4
Manes.06G089401 Manihot esculenta HOM05D000041 ORTHO05D006140 3.6e-13 79.3 172 36.6
COL.COLO4_36949 Corchorus olitorius HOM05D008369 ORTHO05D005932 1.8e-12 77.0 182 41.2
FAN13G2099 Fragaria x ananassa HOM05D008369 ORTHO05D005932 1.8e-12 77.0 174 39.7
Prupe.5G198500 Prunus persica HOM05D008369 ORTHO05D005932 5.2e-12 75.5 192 40.6
Dinv10658 Davidia involucrata HOM05D008369 ORTHO05D005932 2.0e-11 73.6 177 40.7
RcHm_v2.0_Chr7g0182121 Rosa chinensis HOM05D008369 ORTHO05D005932 7.4e-11 71.6 181 40.9
GSVIVG01007962001 Vitis vinifera HOM05D008369 ORTHO05D005932 9.7e-11 71.2 171 36.3
Gohir.A11G032000 Gossypium hirsutum HOM05D008369 ORTHO05D005932 1.7e-10 70.5 174 33.9
MSTRG.11371 Avicennia marina HOM05D012087 ORTHO05D005932 2.2e-10 70.1 194 30.9
CSS0001536 Camellia sinensis var. sinensis HOM05D008369 ORTHO05D005932 2.2e-10 70.1 183 33.9
PGR044G0243 Punica granatum HOM05D008369 ORTHO05D005932 2.8e-10 69.7 233 33.5
Gohir.D11G035400 Gossypium hirsutum HOM05D008369 ORTHO05D005932 4.8e-10 68.9 174 35.1
Rhsim08G0152100 Rhododendron simsii HOM05D008369 ORTHO05D005932 6.3e-10 68.6 165 33.9
Ah.02g113780 Amaranthus hybridus HOM05D008369 ORTHO05D005932 8.2e-10 68.2 175 35.4
Dinv34096 Davidia involucrata HOM05D009095 ORTHO05D005932 3.1e-09 66.2 169 32.0
Gorai.007G038200 Gossypium raimondii HOM05D008369 ORTHO05D005932 3.1e-09 66.2 174 36.8
Manes.05G106200 Manihot esculenta HOM05D009095 ORTHO05D005932 1.2e-08 64.3 175 32.0
SalBow5G3698 Salvia bowleyana HOM05D012087 ORTHO05D005932 1.2e-08 64.3 186 29.0
Hund09825 Selenicereus undatus HOM05D008369 ORTHO05D005932 1.6e-08 63.9 158 31.0
Gohir.A12G179000 Gossypium hirsutum HOM05D008369 ORTHO05D005932 2.6e-08 63.2 163 33.7
Gorai.008G194900 Gossypium raimondii HOM05D008369 ORTHO05D005932 4.5e-08 62.4 163 33.7
TAR622G0621 Trochodendron aralioides HOM05D034691 ORTHO05D005932 7.7e-08 61.6 150 34.7
Duzib251G0477 Durio zibethinus HOM05D009095 ORTHO05D005932 1.3e-07 60.8 158 42.4
Gohir.D12G181600 Gossypium hirsutum HOM05D008369 ORTHO05D005932 1.3e-07 60.8 163 32.5
Oeu052457.1 Olea europaea HOM05D012087 ORTHO05D005932 1.3e-07 60.8 97 38.1
CsaV3_1G005690 Cucumis sativus L. HOM05D008369 ORTHO05D005932 1.7e-07 60.5 192 38.5
DCAR_026037 Daucus carota HOM05D008369 ORTHO05D005932 1.7e-07 60.5 155 32.3
Ciclev10032785m.g Citrus clementina HOM05D009095 ORTHO05D005932 2.2e-07 60.1 181 30.9
MELO3C002000.2 Cucumis melo HOM05D008369 ORTHO05D005932 2.9e-07 59.7 200 37.5
CSS0024821 Camellia sinensis var. sinensis HOM05D008369 ORTHO05D005932 5.0e-07 58.9 183 31.1
TWI56G0627 Tripterygium wilfordii HOM05D009095 ORTHO05D005932 8.5e-07 58.2 155 32.3
Phvul.002G169000 Phaseolus vulgaris HOM05D013667 ORTHO05D005932 2.5e-06 56.6 118 35.6
Haze_11958 Corylus avellana HOM05D009095 ORTHO05D005932 3.2e-06 56.2 96 38.5
vmacro01343 Vaccinium macrocarpon HOM05D009095 ORTHO05D005932 4.2e-06 55.8 151 30.5
vmacro17570 Vaccinium macrocarpon HOM05D008369 ORTHO05D005932 4.2e-06 55.8 141 31.9
CiPaw.06G088700 Carya illinoinensis HOM05D009095 ORTHO05D005932 5.5e-06 55.5 92 39.1
ClCG09G021960 Citrullus lanatus HOM05D029799 ORTHO05D005932 5.5e-06 55.5 177 27.7
Migut.D01759 Erythranthe guttata HOM05D012087 ORTHO05D005932 5.5e-06 55.5 71 42.3
Migut.L01243 Erythranthe guttata HOM05D009095 ORTHO05D005932 5.5e-06 55.5 171 32.7
Hund02625 Selenicereus undatus HOM05D008369 ORTHO05D005932 5.5e-06 55.5 188 33.5
A03p03440 Brassica napus HOM05D010063 ORTHO05D011941 7.2e-06 55.1 64 46.9
Lj4g0019858 Lotus japonicus HOM05D013667 ORTHO05D005932 7.2e-06 55.1 81 45.7
MBI16_g25840_MAGBIO Magnolia biondii HOM05D036885 ORTHO05D034247 7.2e-06 55.1 154 33.1
Medtr4g082330 Medicago truncatula HOM05D013667 ORTHO05D005932 7.2e-06 55.1 108 33.3
Nitab4.5_0001211g0150 Nicotiana tabacum HOM05D012087 ORTHO05D005932 7.2e-06 55.1 205 26.3
Sp6g35170 Schrenkiella parvula HOM05D010063 ORTHO05D011941 7.2e-06 55.1 91 39.6
arahy.Tifrunner.gnm1.ann1.3IH7MW Arachis hypogaea HOM05D013667 ORTHO05D005932 9.4e-06 54.7 113 34.5
Cc00_g25850 Coffea canephora HOM05D012087 ORTHO05D005932 9.4e-06 54.7 100 37.0
Nitab4.5_0005900g0030 Nicotiana tabacum HOM05D012087 ORTHO05D005932 9.4e-06 54.7 208 35.1


User provided reference genes

Program Settings