Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.FZ9CQY Arachis hypogaea HOM05D001376 ORTHO05D019477 1.0e-75 286.6 139 100.0
arahy.Tifrunner.gnm1.ann1.N4ADYN Arachis hypogaea HOM05D001376 ORTHO05D019477 1.1e-53 213.4 175 65.7
arahy.Tifrunner.gnm1.ann1.ZZ1IB7 Arachis hypogaea HOM05D001376 ORTHO05D019477 1.0e-46 190.3 100 90.0
arahy.Tifrunner.gnm1.ann1.PE2E54 Arachis hypogaea HOM05D001376 ORTHO05D003384 2.3e-30 136.0 170 50.0
arahy.Tifrunner.gnm1.ann1.YYH81C Arachis hypogaea HOM05D001376 ORTHO05D003384 3.3e-29 132.1 190 45.8
arahy.Tifrunner.gnm1.ann1.J1J05D Arachis hypogaea HOM05D001376 ORTHO05D019477 9.5e-29 130.6 147 53.1
VMungo1383G2995 Vigna mungo HOM05D001376 ORTHO05D003384 1.6e-20 103.2 180 38.9
Glyma.19G162000 Glycine max HOM05D001376 ORTHO05D003384 2.8e-20 102.4 182 39.6
VMungo0720G0055 Vigna mungo HOM05D001376 ORTHO05D003384 6.2e-20 101.3 183 39.3
Glyma.02G140200 Glycine max HOM05D001376 ORTHO05D003384 2.4e-19 99.4 184 40.2
Phvul.007G178400 Phaseolus vulgaris HOM05D001376 ORTHO05D003384 5.2e-19 98.2 193 38.3
Glyma.03G160000 Glycine max HOM05D001376 ORTHO05D003384 6.8e-19 97.8 181 39.8
Lalb_Chr02g0142361 Lupinus albus HOM05D001376 ORTHO05D003384 6.8e-19 97.8 182 39.6
Medtr1g070380 Medicago truncatula HOM05D001376 ORTHO05D003384 8.9e-19 97.4 179 37.4
Lalb_Chr06g0162581 Lupinus albus HOM05D001376 ORTHO05D003384 1.2e-18 97.1 188 38.8
Psat6g056360 Pisum sativum HOM05D001376 ORTHO05D003384 1.5e-18 96.7 175 37.1
Glyma.10G033900 Glycine max HOM05D001376 ORTHO05D003384 2.9e-17 92.4 183 37.7
Phvul.001G157800 Phaseolus vulgaris HOM05D001376 ORTHO05D003384 3.8e-17 92.0 179 38.0
Ca_09702_v3 Cicer arietinum L. HOM05D001376 ORTHO05D003384 4.9e-17 91.7 176 35.8
TAR365G0955 Trochodendron aralioides HOM05D001376 ORTHO05D003384 8.4e-17 90.9 177 40.7
Lj5g0021928 Lotus japonicus HOM05D001376 ORTHO05D003384 1.9e-16 89.7 180 37.2
Lj1g0005493 Lotus japonicus HOM05D001376 ORTHO05D003384 4.2e-16 88.6 180 36.1
Hma1.2p1_0172F.1_g076340 Hydrangea macrophylla HOM05D001376 ORTHO05D003384 5.4e-16 88.2 177 36.7
Actinidia21174 Actinidia chinensis HOM05D001376 ORTHO05D003384 1.2e-15 87.0 178 36.5
CSS0021871 Camellia sinensis var. sinensis HOM05D001376 ORTHO05D003384 4.6e-15 85.1 177 36.7
CSS0050101 Camellia sinensis var. sinensis HOM05D001376 ORTHO05D003384 4.6e-15 85.1 177 36.7
Dinv34585 Davidia involucrata HOM05D001376 ORTHO05D003384 6.0e-15 84.7 176 36.9
Nn1g02622 Nelumbo nucifera HOM05D001376 ORTHO05D003384 1.7e-14 83.2 171 35.7
Haze_24554 Corylus avellana HOM05D001376 ORTHO05D003384 5.1e-14 81.6 181 35.9
Lj1A60G56 Lonicera japonica HOM05D001376 ORTHO05D003384 6.6e-14 81.3 176 37.5
Hund22134 Selenicereus undatus HOM05D001376 ORTHO05D003384 6.6e-14 81.3 181 38.1
ECA248G1675 Erigeron canadensis HOM05D001376 ORTHO05D003384 1.9e-13 79.7 181 37.6
Hma1.2p1_1029F.1_g249740 Hydrangea macrophylla HOM05D001376 ORTHO05D003384 4.3e-13 78.6 174 33.9
Gohir.A11G250000 Gossypium hirsutum HOM05D001376 ORTHO05D003384 5.6e-13 78.2 171 35.7
Rhsim13G0031600 Rhododendron simsii HOM05D001376 ORTHO05D003384 5.6e-13 78.2 171 34.5
Nn3g19546 Nelumbo nucifera HOM05D001376 ORTHO05D003384 1.3e-12 77.0 162 36.4
Actinidia09085 Actinidia chinensis HOM05D001376 ORTHO05D003384 1.6e-12 76.6 175 35.4
MD12G1244000 Malus domestica HOM05D001376 ORTHO05D003384 1.6e-12 76.6 165 35.2
TPR.G9048 Trifolium pratense HOM05D001376 ORTHO05D003384 1.6e-12 76.6 61 63.9
DCAR_007341 Daucus carota HOM05D001376 ORTHO05D003384 4.8e-12 75.1 175 36.0
Gohir.D11G260500 Gossypium hirsutum HOM05D001376 ORTHO05D003384 4.8e-12 75.1 172 34.9
Gorai.007G278800 Gossypium raimondii HOM05D001376 ORTHO05D003384 4.8e-12 75.1 172 34.9
Prupe.6G345700 Prunus persica HOM05D001376 ORTHO05D003384 6.2e-12 74.7 177 32.8
FAN05G5193 Fragaria x ananassa HOM05D001376 ORTHO05D003384 8.1e-12 74.3 160 36.2
FAN05G5449 Fragaria x ananassa HOM05D001376 ORTHO05D003384 8.1e-12 74.3 160 36.2
FAN09G2916 Fragaria x ananassa HOM05D001376 ORTHO05D003384 1.1e-11 73.9 167 36.5
TWI12G0820 Tripterygium wilfordii HOM05D001376 ORTHO05D003384 1.1e-11 73.9 175 34.9
FAN02G2578 Fragaria x ananassa HOM05D001376 ORTHO05D003384 1.8e-11 73.2 163 36.8
QL04p081310 Quercus lobata HOM05D001376 ORTHO05D003384 1.8e-11 73.2 178 36.0
AUR62001059 Chenopodium quinoa HOM05D001376 ORTHO05D003384 2.4e-11 72.8 181 34.8
AUR62004893 Chenopodium quinoa HOM05D001376 ORTHO05D003384 2.4e-11 72.8 181 34.8
Duzib106G1306 Durio zibethinus HOM05D001376 ORTHO05D003384 2.4e-11 72.8 165 36.4
VMungo0540G0510 Vigna mungo HOM05D001376 ORTHO05D003384 2.4e-11 72.8 177 32.8
CANSAT54G2402 Cannabis sativa HOM05D001376 ORTHO05D003384 3.1e-11 72.4 191 34.6
MD04G1227000 Malus domestica HOM05D001376 ORTHO05D003384 3.1e-11 72.4 178 32.6
SalBow4G1861 Salvia bowleyana HOM05D001376 ORTHO05D003384 3.1e-11 72.4 174 33.3
ATR0665G324 Amborella trichopoda HOM05D001376 ORTHO05D003384 4.0e-11 72.0 153 35.9
EL10Ac4g09077 Beta vulgaris HOM05D001376 ORTHO05D003384 4.0e-11 72.0 176 34.7
Aqoxy5G00313 Aquilegia oxysepala HOM05D001376 ORTHO05D003384 5.3e-11 71.6 166 34.3
FvH4_6g02580 Fragaria vesca HOM05D001376 ORTHO05D003384 6.9e-11 71.2 164 36.6
FAN14G0135 Fragaria x ananassa HOM05D001376 ORTHO05D003384 6.9e-11 71.2 164 36.6
FAN14G2565 Fragaria x ananassa HOM05D001376 ORTHO05D003384 6.9e-11 71.2 164 36.6
Manes.09G150900 Manihot esculenta HOM05D001376 ORTHO05D003384 6.9e-11 71.2 168 35.7
Solyc09g066120.4 Solanum lycopersicum HOM05D001376 ORTHO05D003384 6.9e-11 71.2 179 33.0
Dinv22460 Davidia involucrata HOM05D001376 ORTHO05D003384 9.0e-11 70.9 181 34.8
Hund06945 Selenicereus undatus HOM05D001376 ORTHO05D003384 9.0e-11 70.9 176 35.8
PGSC0003DMG400019909 Solanum tuberosum HOM05D001376 ORTHO05D003384 9.0e-11 70.9 180 32.8
GSVIVG01000758001 Vitis vinifera HOM05D001376 ORTHO05D003384 9.0e-11 70.9 175 30.9
Gorai.004G247700 Gossypium raimondii HOM05D001376 ORTHO05D003384 1.2e-10 70.5 172 34.9
Rhsim01G0268000 Rhododendron simsii HOM05D001376 ORTHO05D003384 1.2e-10 70.5 176 31.8
Sabra13G0039500 Salix brachista HOM05D001376 ORTHO05D003384 1.2e-10 70.5 176 33.0
Sopen09g027880 Solanum pennellii HOM05D001376 ORTHO05D003384 1.5e-10 70.1 179 33.0
Glyma.03G248200 Glycine max HOM05D001376 ORTHO05D003384 2.0e-10 69.7 178 33.7
Nitab4.5_0000187g0350 Nicotiana tabacum HOM05D001376 ORTHO05D003384 2.0e-10 69.7 179 33.5
Oeu014620.1 Olea europaea HOM05D001376 ORTHO05D003384 2.0e-10 69.7 175 32.6
Peaxi162Scf00719g00516 Petunia axillaris HOM05D001376 ORTHO05D003384 2.0e-10 69.7 170 34.1
Thecc.05G280200 Theobroma cacao HOM05D001376 ORTHO05D003384 2.0e-10 69.7 169 34.3
arahy.Tifrunner.gnm1.ann1.E4TWYF Arachis hypogaea HOM05D001376 ORTHO05D003384 2.6e-10 69.3 180 35.0
arahy.Tifrunner.gnm1.ann1.PDDC3X Arachis hypogaea HOM05D001376 ORTHO05D003384 2.6e-10 69.3 180 35.0
Gohir.A08G216200 Gossypium hirsutum HOM05D001376 ORTHO05D003384 2.6e-10 69.3 169 36.1
Phvul.006G103100 Phaseolus vulgaris HOM05D001376 ORTHO05D003384 2.6e-10 69.3 177 35.0
Potri.013G043000 Populus trichocarpa HOM05D001376 ORTHO05D003384 2.6e-10 69.3 176 35.2
Sed0017614 Sechium edule HOM05D001376 ORTHO05D003384 2.6e-10 69.3 181 34.3
DCAR_005870 Daucus carota HOM05D001376 ORTHO05D003384 3.4e-10 68.9 179 34.1
Nitab4.5_0004328g0030 Nicotiana tabacum HOM05D001376 ORTHO05D003384 3.4e-10 68.9 179 33.5
SGA_v2.0_scaffold172G38977 Striga asiatica HOM05D001376 ORTHO05D003384 3.4e-10 68.9 176 32.4
Dinv05260 Davidia involucrata HOM05D001376 ORTHO05D003384 4.4e-10 68.6 176 33.5
Sp3g03460 Schrenkiella parvula HOM05D001376 ORTHO05D003384 4.4e-10 68.6 167 34.1
Ciclev10028209m.g Citrus clementina HOM05D001376 ORTHO05D003384 5.8e-10 68.2 177 35.6
Glyma.19G246200 Glycine max HOM05D001376 ORTHO05D003384 5.8e-10 68.2 178 32.6
Solyc01g097010.3 Solanum lycopersicum HOM05D001376 ORTHO05D003384 5.8e-10 68.2 168 32.1
Sopen01g040710 Solanum pennellii HOM05D001376 ORTHO05D003384 5.8e-10 68.2 168 32.1
Manes.08G136700 Manihot esculenta HOM05D001376 ORTHO05D003384 7.6e-10 67.8 177 33.3
RcHm_v2.0_Chr3g0450491 Rosa chinensis HOM05D001376 ORTHO05D003384 7.6e-10 67.8 164 35.4
Aqoxy2G03570 Aquilegia oxysepala HOM05D001376 ORTHO05D003384 9.9e-10 67.4 209 30.6
Gohir.D08G233200 Gossypium hirsutum HOM05D001376 ORTHO05D003384 9.9e-10 67.4 169 34.9
Sed0013004 Sechium edule HOM05D001376 ORTHO05D003384 9.9e-10 67.4 180 33.3
TPR.G6986 Trifolium pratense HOM05D001376 ORTHO05D003384 9.9e-10 67.4 181 30.9
GSVIVG01036237001 Vitis vinifera HOM05D001376 ORTHO05D003384 9.9e-10 67.4 176 34.1
TAR636G2955 Trochodendron aralioides HOM05D001376 ORTHO05D003384 1.3e-09 67.0 148 37.2
Eucgr.H04314 Eucalyptus grandis HOM05D001376 ORTHO05D003384 1.7e-09 66.6 167 32.9
TWI12G1146 Tripterygium wilfordii HOM05D001376 ORTHO05D003384 1.7e-09 66.6 163 31.9
Cpa.g.c31439 Carica papaya HOM05D001376 ORTHO05D003384 2.2e-09 66.2 166 34.9
Duzib128G1990 Durio zibethinus HOM05D001376 ORTHO05D003384 2.2e-09 66.2 168 33.9
HanXRQChr11g0336681 Helianthus annuus HOM05D001376 ORTHO05D003384 2.2e-09 66.2 177 33.9
Medtr7g115340 Medicago truncatula HOM05D001376 ORTHO05D003384 2.2e-09 66.2 191 30.4
Atru.chr2.858 Acer truncatum HOM05D001376 ORTHO05D003384 2.9e-09 65.9 181 33.7
CiPaw.03G259100 Carya illinoinensis HOM05D001376 ORTHO05D003384 2.9e-09 65.9 177 31.6
Sc20g0000470 Simmondsia chinensis HOM05D001376 ORTHO05D003384 2.9e-09 65.9 176 31.8
COL.COLO4_03736 Corchorus olitorius HOM05D001376 ORTHO05D003384 3.8e-09 65.5 168 35.7
PSO063G1102 Papaver somniferum HOM05D001376 ORTHO05D003384 3.8e-09 65.5 175 33.1
Psat3g187920 Pisum sativum HOM05D001376 ORTHO05D003384 4.9e-09 65.1 180 32.2
MSTRG.20466 Avicennia marina HOM05D001376 ORTHO05D003384 6.4e-09 64.7 175 32.0
ClCG02G016820 Citrullus lanatus HOM05D001376 ORTHO05D003384 8.4e-09 64.3 179 33.0
MBI19_g38370_MAGBIO Magnolia biondii HOM05D001376 ORTHO05D003384 8.4e-09 64.3 175 32.0
CiPaw.08G121600 Carya illinoinensis HOM05D001376 ORTHO05D003384 1.4e-08 63.5 175 32.0
Ca_09432_v3 Cicer arietinum L. HOM05D001376 ORTHO05D003384 1.4e-08 63.5 186 30.6
Nn3g21017 Nelumbo nucifera HOM05D001376 ORTHO05D019477 1.4e-08 63.5 51 60.8
Lj1g0011630 Lotus japonicus HOM05D001376 ORTHO05D003384 1.9e-08 63.2 178 31.5
Oeu016453.1 Olea europaea HOM05D001376 ORTHO05D003384 1.9e-08 63.2 174 27.6
PSO017G3492 Papaver somniferum HOM05D001376 ORTHO05D003384 1.9e-08 63.2 175 32.6
Potri.005G056100 Populus trichocarpa HOM05D001376 ORTHO05D003384 1.9e-08 63.2 179 33.0
vmacro02634 Vaccinium macrocarpon HOM05D001376 ORTHO05D003384 1.9e-08 63.2 165 31.5
unitig_746.g26849 Utricularia gibba HOM05D001376 ORTHO05D003384 3.2e-08 62.4 176 31.2
HPP92_018509 Vanilla planifolia HOM05D001376 ORTHO05D003384 3.2e-08 62.4 168 35.7
Oeu038470.1 Olea europaea HOM05D001376 ORTHO05D003384 4.2e-08 62.0 174 29.9
Actinidia18371 Actinidia chinensis HOM05D001376 ORTHO05D003384 5.4e-08 61.6 174 33.3
CAN.G771.18 Capsicum annuum HOM05D001376 ORTHO05D003384 5.4e-08 61.6 177 33.9
Haze_04385 Corylus avellana HOM05D001376 ORTHO05D003384 5.4e-08 61.6 174 31.6
HanXRQChr15g0468061 Helianthus annuus HOM05D001376 ORTHO05D003384 5.4e-08 61.6 173 33.5
THA.LOC104799253 Tarenaya hassleriana HOM05D001376 ORTHO05D003384 5.4e-08 61.6 168 32.1
Cfa006393 Carpinus fangiana HOM05D001376 ORTHO05D003384 7.1e-08 61.2 174 31.6
Sc09g0004060 Simmondsia chinensis HOM05D001376 ORTHO05D003384 9.3e-08 60.8 167 33.5
CAN.G134.62 Capsicum annuum HOM05D001376 ORTHO05D003384 1.2e-07 60.5 167 32.3
Dinv20265 Davidia involucrata HOM05D001376 ORTHO05D003384 1.2e-07 60.5 185 33.0
arahy.Tifrunner.gnm1.ann1.CN05T7 Arachis hypogaea HOM05D001376 ORTHO05D019477 1.6e-07 60.1 33 87.9
C03p41020 Brassica napus HOM05D001376 ORTHO05D003384 1.6e-07 60.1 170 31.8
Lalb_Chr18g0043971 Lupinus albus HOM05D001376 ORTHO05D003384 2.1e-07 59.7 183 30.6
arahy.Tifrunner.gnm1.ann1.QL2VNI Arachis hypogaea HOM05D001376 ORTHO05D003384 2.7e-07 59.3 177 31.1
arahy.Tifrunner.gnm1.ann1.UPVY9X Arachis hypogaea HOM05D001376 ORTHO05D003384 2.7e-07 59.3 177 31.1
BcaC01g04361 Brassica carinata HOM05D001376 ORTHO05D003384 2.7e-07 59.3 170 31.8
QL03p027781 Quercus lobata HOM05D001376 ORTHO05D003384 2.7e-07 59.3 179 34.1
SEGI_00864 Sequoiadendron giganteum HOM05D001376 ORTHO05D003384 2.7e-07 59.3 177 32.8
PGSC0003DMG400020065 Solanum tuberosum HOM05D001376 ORTHO05D003384 2.7e-07 59.3 178 32.6
CAN.G1501.2 Capsicum annuum HOM05D001376 ORTHO05D003384 3.5e-07 58.9 185 28.6
Lsat_1_v5_gn_9_9601 Lactuca sativa HOM05D001376 ORTHO05D003384 3.5e-07 58.9 175 33.1
Solyc06g084000.4 Solanum lycopersicum HOM05D001376 ORTHO05D003384 3.5e-07 58.9 178 32.6
Sopen06g035390 Solanum pennellii HOM05D001376 ORTHO05D003384 3.5e-07 58.9 178 32.6
ECA247G2535 Erigeron canadensis HOM05D001376 ORTHO05D003384 1.3e-06 57.0 183 35.5
Lalb_Chr20g0107831 Lupinus albus HOM05D001376 ORTHO05D003384 1.3e-06 57.0 181 30.9
HanXRQChr01g0005271 Helianthus annuus HOM05D001376 ORTHO05D003384 1.7e-06 56.6 176 30.7
Nitab4.5_0001044g0110 Nicotiana tabacum HOM05D001376 ORTHO05D003384 2.3e-06 56.2 178 30.9
PGR004G0191 Punica granatum HOM05D001376 ORTHO05D003384 2.3e-06 56.2 165 32.7
CSS0032755 Camellia sinensis var. sinensis HOM05D001376 ORTHO05D003384 3.0e-06 55.8 177 29.9
Nitab4.5_0006433g0030 Nicotiana tabacum HOM05D001376 ORTHO05D003384 3.9e-06 55.5 178 30.9
Ah.06g192050 Amaranthus hybridus HOM05D001376 ORTHO05D003384 5.1e-06 55.1 205 27.8
MELO3C004398.2 Cucumis melo HOM05D001376 ORTHO05D003384 5.1e-06 55.1 180 31.7
Manes.01G200450 Manihot esculenta HOM05D001376 ORTHO05D003384 5.1e-06 55.1 168 32.7
Peaxi162Scf01530g00026 Petunia axillaris HOM05D001376 ORTHO05D003384 5.1e-06 55.1 178 29.8


User provided reference genes

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