Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.FSX0YI Arachis hypogaea HOM05D000326 ORTHO05D084195 1.3e-71 273.1 151 100.0
arahy.Tifrunner.gnm1.ann1.BKNL7R Arachis hypogaea HOM05D000326 ORTHO05D003748 8.2e-26 120.9 74 86.5
arahy.Tifrunner.gnm1.ann1.P43TQX Arachis hypogaea HOM05D006566 ORTHO05D004366 1.8e-12 76.6 42 88.1
arahy.Tifrunner.gnm1.ann1.H48B83 Arachis hypogaea HOM05D000326 ORTHO05D003748 5.2e-12 75.1 52 78.8
arahy.Tifrunner.gnm1.ann1.VC0084 Arachis hypogaea HOM05D000326 ORTHO05D003748 1.2e-11 73.9 52 76.9
arahy.Tifrunner.gnm1.ann1.8Y6H0Q Arachis hypogaea HOM05D000326 ORTHO05D003748 3.3e-11 72.4 70 57.1
arahy.Tifrunner.gnm1.ann1.65VZXH Arachis hypogaea HOM05D007334 ORTHO05D011873 5.7e-11 71.6 39 89.7
arahy.Tifrunner.gnm1.ann1.M2NLAU Arachis hypogaea HOM05D000326 ORTHO05D003748 5.7e-11 71.6 39 89.7
arahy.Tifrunner.gnm1.ann1.N5JFEK Arachis hypogaea HOM05D000326 ORTHO05D003748 5.7e-11 71.6 47 80.9
arahy.Tifrunner.gnm1.ann1.7P1BGF Arachis hypogaea HOM05D005679 ORTHO05D003748 7.5e-11 71.2 99 44.4
arahy.Tifrunner.gnm1.ann1.P5DNC9 Arachis hypogaea HOM05D000326 ORTHO05D003748 7.5e-11 71.2 41 82.9
arahy.Tifrunner.gnm1.ann1.1L9BHC Arachis hypogaea HOM05D000326 ORTHO05D003748 9.7e-11 70.9 78 61.5
arahy.Tifrunner.gnm1.ann1.GK2FLE Arachis hypogaea HOM05D000326 ORTHO05D003748 9.7e-11 70.9 78 61.5
arahy.Tifrunner.gnm1.ann1.ZDA2WA Arachis hypogaea HOM05D000326 ORTHO05D003748 1.3e-10 70.5 52 71.2
arahy.Tifrunner.gnm1.ann1.7LZ8H1 Arachis hypogaea HOM05D000326 ORTHO05D003748 6.3e-10 68.2 66 60.6
arahy.Tifrunner.gnm1.ann1.TZJ8UV Arachis hypogaea HOM05D000326 ORTHO05D003748 3.1e-09 65.9 41 80.5
Lj6g0028133 Lotus japonicus HOM05D000182 ORTHO05D003748 9.1e-09 64.3 52 69.2
Phvul.003G082700 Phaseolus vulgaris HOM05D000326 ORTHO05D003748 1.6e-08 63.5 52 65.4
Eucgr.E03957 Eucalyptus grandis HOM05D000326 ORTHO05D003748 2.0e-08 63.2 52 67.3
Glyma.15G113300 Glycine max HOM05D000182 ORTHO05D003748 3.5e-08 62.4 52 67.3
Lj4g0020890 Lotus japonicus HOM05D000326 ORTHO05D003748 4.5e-08 62.0 52 65.4
COL.COLO4_31858 Corchorus olitorius HOM05D000326 ORTHO05D003748 7.7e-08 61.2 52 61.5
Glyma.09G008900 Glycine max HOM05D000182 ORTHO05D003748 1.0e-07 60.8 52 65.4
Ca_21053_v3 Cicer arietinum L. HOM05D000326 ORTHO05D003748 2.9e-07 59.3 78 52.6
Duzib235G0859 Durio zibethinus HOM05D000182 ORTHO05D003748 2.9e-07 59.3 52 59.6
QL05p069871 Quercus lobata HOM05D000326 ORTHO05D003748 2.9e-07 59.3 52 59.6
VMungo1215G0871 Vigna mungo HOM05D000326 ORTHO05D003748 2.9e-07 59.3 40 72.5
FvH4_3g01160 Fragaria vesca HOM05D000326 ORTHO05D003748 5.0e-07 58.5 52 59.6
Phvul.006G144400 Phaseolus vulgaris HOM05D000182 ORTHO05D003748 5.0e-07 58.5 52 61.5
DCAR_004868 Daucus carota HOM05D000326 ORTHO05D003748 6.5e-07 58.2 52 59.6
MD05G1355400 Malus domestica HOM05D000326 ORTHO05D003748 6.5e-07 58.2 52 57.7
MD05G1355800 Malus domestica HOM05D000326 ORTHO05D003748 6.5e-07 58.2 52 57.7
QL03p008385 Quercus lobata HOM05D000326 ORTHO05D003748 6.5e-07 58.2 52 59.6
QL05p069860 Quercus lobata HOM05D000326 ORTHO05D003748 6.5e-07 58.2 52 59.6
QL10p003421 Quercus lobata HOM05D000326 ORTHO05D003748 6.5e-07 58.2 52 59.6
Glyma.02G116900 Glycine max HOM05D000326 ORTHO05D003748 8.5e-07 57.8 58 56.9
Oeu002754.1 Olea europaea HOM05D000326 ORTHO05D003748 8.5e-07 57.8 52 59.6
Atru.chr1.2493 Acer truncatum HOM05D000326 ORTHO05D003748 1.1e-06 57.4 52 57.7
arahy.Tifrunner.gnm1.ann1.5KTK5R Arachis hypogaea HOM05D000182 ORTHO05D003748 1.1e-06 57.4 52 61.5
arahy.Tifrunner.gnm1.ann1.C9QTWM Arachis hypogaea HOM05D000182 ORTHO05D003748 1.1e-06 57.4 52 61.5
Cfa000128 Carpinus fangiana HOM05D000182 ORTHO05D003748 1.1e-06 57.4 52 57.7
DCAR_030879 Daucus carota HOM05D000182 ORTHO05D003748 1.1e-06 57.4 52 59.6
Glyma.17G009400 Glycine max HOM05D000326 ORTHO05D003748 1.5e-06 57.0 52 59.6
QL03p008407 Quercus lobata HOM05D000326 ORTHO05D003748 1.5e-06 57.0 52 57.7
QL05p069854 Quercus lobata HOM05D000182 ORTHO05D003748 1.5e-06 57.0 52 57.7
QL10p003427 Quercus lobata HOM05D000182 ORTHO05D003748 1.5e-06 57.0 52 57.7
CsaV3_1G045840 Cucumis sativus L. HOM05D000326 ORTHO05D003748 1.9e-06 56.6 42 57.1
DCAR_002211 Daucus carota HOM05D000326 ORTHO05D003748 1.9e-06 56.6 52 55.8
Rhsim02G0104400 Rhododendron simsii HOM05D000326 ORTHO05D003748 1.9e-06 56.6 42 61.9
vmacro23325 Vaccinium macrocarpon HOM05D000326 ORTHO05D003748 1.9e-06 56.6 52 57.7
CAN.G1263.7 Capsicum annuum HOM05D000326 ORTHO05D003748 2.5e-06 56.2 52 59.6
ClCG01G009940 Citrullus lanatus HOM05D000326 ORTHO05D003748 2.5e-06 56.2 52 53.8
FAN25G3275 Fragaria x ananassa HOM05D000326 ORTHO05D003748 2.5e-06 56.2 52 57.7
Gohir.D05G176700 Gossypium hirsutum HOM05D000326 ORTHO05D003748 2.5e-06 56.2 49 61.2
Gorai.009G182100 Gossypium raimondii HOM05D000326 ORTHO05D003748 2.5e-06 56.2 49 61.2
Potri.011G022500 Populus trichocarpa HOM05D000326 ORTHO05D003748 2.5e-06 56.2 40 65.0
TWI38G0552 Tripterygium wilfordii HOM05D000326 ORTHO05D003748 2.5e-06 56.2 52 55.8
TAR626G1478 Trochodendron aralioides HOM05D000326 ORTHO05D003748 2.5e-06 56.2 39 66.7
Duzib192G0921 Durio zibethinus HOM05D000326 ORTHO05D003748 3.2e-06 55.8 52 57.7
HanXRQChr15g0470861 Helianthus annuus HOM05D000326 ORTHO05D003748 3.2e-06 55.8 52 55.8
QL03p008379 Quercus lobata HOM05D000326 ORTHO05D003748 3.2e-06 55.8 40 62.5
Haze_06896 Corylus avellana HOM05D000182 ORTHO05D003748 4.2e-06 55.5 52 55.8
Gohir.A05G173700 Gossypium hirsutum HOM05D000326 ORTHO05D003748 4.2e-06 55.5 49 59.2
MD10G1329100 Malus domestica HOM05D000326 ORTHO05D003748 4.2e-06 55.5 52 55.8
Manes.16G001800 Manihot esculenta HOM05D000326 ORTHO05D003748 4.2e-06 55.5 50 54.0
Nn1g03354 Nelumbo nucifera HOM05D000326 ORTHO05D003748 4.2e-06 55.5 52 55.8
Psat4g003600 Pisum sativum HOM05D000326 ORTHO05D003748 4.2e-06 55.5 78 50.0
Solyc04g014670.3 Solanum lycopersicum HOM05D000326 ORTHO05D003748 4.2e-06 55.5 42 64.3
Sopen04g006770 Solanum pennellii HOM05D000326 ORTHO05D003748 4.2e-06 55.5 42 64.3
EL10Ac8g20162 Beta vulgaris HOM05D000326 ORTHO05D003748 5.5e-06 55.1 39 64.1
Cc09_g01030 Coffea canephora HOM05D000326 ORTHO05D003748 5.5e-06 55.1 52 59.6
Duzib235G0545 Durio zibethinus HOM05D000326 ORTHO05D003748 5.5e-06 55.1 49 59.2
Potri.011G022400 Populus trichocarpa HOM05D000326 ORTHO05D003748 5.5e-06 55.1 52 53.8
Sc17g0007650 Simmondsia chinensis HOM05D000326 ORTHO05D003748 5.5e-06 55.1 52 55.8
arahy.Tifrunner.gnm1.ann1.JST4VX Arachis hypogaea HOM05D000326 ORTHO05D003748 7.2e-06 54.7 49 61.2
CANSAT56G0392 Cannabis sativa HOM05D000182 ORTHO05D003748 7.2e-06 54.7 52 53.8
Gohir.D10G009900 Gossypium hirsutum HOM05D000326 ORTHO05D003748 7.2e-06 54.7 49 59.2
Lsat_1_v5_gn_0_39500 Lactuca sativa HOM05D000326 ORTHO05D003748 7.2e-06 54.7 42 59.5
Sabra11G0013700 Salix brachista HOM05D000182 ORTHO05D003748 7.2e-06 54.7 52 55.8
Aqoxy1G04159 Aquilegia oxysepala HOM05D000326 ORTHO05D003748 9.4e-06 54.3 49 57.1
CANSAT56G1453 Cannabis sativa HOM05D000326 ORTHO05D003748 9.4e-06 54.3 49 57.1
CAN.G1186.14 Capsicum annuum HOM05D000182 ORTHO05D003748 9.4e-06 54.3 52 53.8
MELO3C021704.2 Cucumis melo HOM05D000326 ORTHO05D003748 9.4e-06 54.3 59 52.5
Gohir.A10G010200 Gossypium hirsutum HOM05D000326 ORTHO05D003748 9.4e-06 54.3 49 59.2
Hma1.2p1_0660F.1_g197520 Hydrangea macrophylla HOM05D000326 ORTHO05D003748 9.4e-06 54.3 52 55.8
Lalb_Chr07g0177031 Lupinus albus HOM05D000326 ORTHO05D003748 9.4e-06 54.3 52 55.8
TPR.G37042 Trifolium pratense HOM05D000326 ORTHO05D003748 9.4e-06 54.3 78 48.7


User provided reference genes

Program Settings