Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7QB25Q Arachis hypogaea HOM05D005803 ORTHO05D008090 5.9e-308 1060.1 547 100.0
arahy.Tifrunner.gnm1.ann1.FSUI8I Arachis hypogaea HOM05D005803 ORTHO05D008090 5.9e-308 1060.1 547 100.0
Psat1g187960 Pisum sativum HOM05D005803 ORTHO05D008090 1.9e-269 932.2 561 86.3
VMungo0540G0998 Vigna mungo HOM05D005803 ORTHO05D008090 1.2e-268 929.5 561 87.0
Glyma.13G216500 Glycine max HOM05D005803 ORTHO05D008090 4.6e-268 927.5 561 86.3
Lj6g0003207 Lotus japonicus HOM05D005803 ORTHO05D008090 3.0e-267 924.9 561 85.4
Phvul.006G162900 Phaseolus vulgaris HOM05D005803 ORTHO05D008090 5.1e-267 924.1 561 85.4
Glyma.15G096000 Glycine max HOM05D005803 ORTHO05D008090 1.5e-266 922.5 561 86.1
Lalb_Chr18g0055621 Lupinus albus HOM05D005803 ORTHO05D008090 2.5e-266 921.8 561 85.2
Ca_00559_v3 Cicer arietinum L. HOM05D005803 ORTHO05D008090 3.4e-263 911.4 561 84.8
CsaV3_6G017350 Cucumis sativus L. HOM05D005803 ORTHO05D008090 1.3e-259 899.4 561 81.8
Cfa015360 Carpinus fangiana HOM05D005803 ORTHO05D008090 2.1e-252 875.5 561 79.5
ClCG06G005310 Citrullus lanatus HOM05D005803 ORTHO05D008090 1.6e-249 865.9 626 73.5
QL06p007721 Quercus lobata HOM05D005803 ORTHO05D008090 1.6e-249 865.9 560 79.1
Ciclev10004654m.g Citrus clementina HOM05D005803 ORTHO05D008090 3.6e-249 864.8 562 78.8
Haze_01246 Corylus avellana HOM05D005803 ORTHO05D008090 3.1e-248 861.7 600 74.7
Prupe.1G140200 Prunus persica HOM05D005803 ORTHO05D008090 9.0e-248 860.1 561 79.5
Hma1.2p1_0698F.1_g205430 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 1.7e-246 855.9 561 77.9
RcHm_v2.0_Chr4g0421441 Rosa chinensis HOM05D005803 ORTHO05D008090 3.8e-246 854.7 561 79.1
Sed0014775 Sechium edule HOM05D005803 ORTHO05D008090 6.4e-246 854.0 561 79.1
GSVIVG01017783001 Vitis vinifera HOM05D005803 ORTHO05D008090 6.4e-246 854.0 561 77.0
MD16G1173300 Malus domestica HOM05D005803 ORTHO05D008090 1.1e-245 853.2 562 79.0
CSS0017376 Camellia sinensis var. sinensis HOM05D005803 ORTHO05D008090 9.3e-245 850.1 562 77.6
CSS0035312 Camellia sinensis var. sinensis HOM05D005803 ORTHO05D008090 9.3e-245 850.1 562 77.6
Manes.15G015300 Manihot esculenta HOM05D005803 ORTHO05D008090 9.3e-245 850.1 561 79.1
TWI09G0274 Tripterygium wilfordii HOM05D005803 ORTHO05D008090 1.7e-243 845.9 563 77.4
Thecc.04G279700 Theobroma cacao HOM05D005803 ORTHO05D008090 1.3e-241 839.7 562 76.7
Gohir.A10G161600 Gossypium hirsutum HOM05D005803 ORTHO05D008090 1.4e-240 836.3 562 76.7
Medtr2g019850 Medicago truncatula HOM05D005803 ORTHO05D008090 1.4e-240 836.3 561 79.1
Potri.008G215100 Populus trichocarpa HOM05D005803 ORTHO05D008090 1.8e-240 835.9 561 76.5
Sabra08G0155700 Salix brachista HOM05D005803 ORTHO05D008090 1.8e-240 835.9 561 76.3
MD13G1171800 Malus domestica HOM05D005803 ORTHO05D008090 4.0e-240 834.7 562 77.9
Gorai.011G187600 Gossypium raimondii HOM05D005803 ORTHO05D008090 1.2e-239 833.2 562 77.0
PGR031G1735 Punica granatum HOM05D005803 ORTHO05D008090 2.6e-239 832.0 562 75.6
Potri.010G022100 Populus trichocarpa HOM05D005803 ORTHO05D008090 5.8e-239 830.9 561 75.8
Sc19g0005000 Simmondsia chinensis HOM05D005803 ORTHO05D008090 9.9e-239 830.1 562 75.8
CiPaw.01G151500 Carya illinoinensis HOM05D005803 ORTHO05D008090 2.2e-238 828.9 561 76.1
CANSAT78G2259 Cannabis sativa HOM05D005803 ORTHO05D008090 8.4e-238 827.0 561 77.2
Sopen01g029400 Solanum pennellii HOM05D005803 ORTHO05D008090 1.6e-236 822.8 562 75.1
Atru.chr4.2785 Acer truncatum HOM05D005803 ORTHO05D008090 1.8e-235 819.3 513 81.3
Peaxi162Scf00386g00615 Petunia axillaris HOM05D005803 ORTHO05D008090 2.5e-234 815.5 562 75.3
Dinv44408 Davidia involucrata HOM05D005803 ORTHO05D008090 3.3e-234 815.1 561 74.9
Nn3g21354 Nelumbo nucifera HOM05D005803 ORTHO05D008090 1.3e-233 813.1 562 74.2
CAN.G223.20 Capsicum annuum HOM05D005803 ORTHO05D008090 3.7e-233 811.6 562 75.6
FvH4_4g17530 Fragaria vesca HOM05D005803 ORTHO05D008090 5.3e-232 807.7 513 80.3
FAN07G1352 Fragaria x ananassa HOM05D005803 ORTHO05D008090 5.3e-232 807.7 565 75.9
FAN12G0977 Fragaria x ananassa HOM05D005803 ORTHO05D008090 1.2e-231 806.6 557 76.5
FAN12G3070 Fragaria x ananassa HOM05D005803 ORTHO05D008090 8.4e-230 800.4 560 76.1
Gohir.D10G168100 Gossypium hirsutum HOM05D005803 ORTHO05D008090 1.9e-229 799.3 562 75.1
Actinidia40241 Actinidia chinensis HOM05D005803 ORTHO05D008090 2.5e-229 798.9 557 74.7
MELO3C021349.2 Cucumis melo HOM05D005803 ORTHO05D008090 5.5e-229 797.7 648 67.6
Duzib151G0664 Durio zibethinus HOM05D005803 ORTHO05D008090 1.2e-228 796.6 562 75.4
Eucgr.B01277 Eucalyptus grandis HOM05D005803 ORTHO05D008090 3.9e-227 791.6 562 73.1
Lsat_1_v5_gn_5_69681 Lactuca sativa HOM05D005803 ORTHO05D008090 7.4e-226 787.3 561 72.7
TAR365G0996 Trochodendron aralioides HOM05D005803 ORTHO05D008090 9.6e-226 786.9 562 73.8
Cpa.g.sc1214.2 Carica papaya HOM05D005803 ORTHO05D008090 1.4e-224 783.1 562 73.5
Rhsim04G0218200 Rhododendron simsii HOM05D005803 ORTHO05D008090 1.8e-224 782.7 612 69.0
DCAR_027096 Daucus carota HOM05D005803 ORTHO05D008090 9.0e-224 780.4 576 72.0
Lj6C671G13 Lonicera japonica HOM05D005803 ORTHO05D008090 1.5e-223 779.6 512 77.1
FAN22G2255 Fragaria x ananassa HOM05D005803 ORTHO05D008090 1.0e-222 776.9 546 76.2
THA.LOC104820247 Tarenaya hassleriana HOM05D005803 ORTHO05D008090 5.0e-222 774.6 561 70.9
EL10Ac3g06553 Beta vulgaris HOM05D005803 ORTHO05D008090 1.6e-220 769.6 562 70.6
HanXRQChr13g0410111 Helianthus annuus HOM05D005803 ORTHO05D008090 6.1e-220 767.7 561 71.8
Aqoxy5G00678 Aquilegia oxysepala HOM05D005803 ORTHO05D008090 1.8e-219 766.1 537 72.8
MSTRG.3937 Avicennia marina HOM05D005803 ORTHO05D008090 1.8e-219 766.1 565 71.0
Cc03_g02160 Coffea canephora HOM05D005803 ORTHO05D008090 1.5e-218 763.1 560 71.2
Migut.G00189 Erythranthe guttata HOM05D005803 ORTHO05D008090 3.1e-216 755.4 566 70.1
COL.COLO4_13910 Corchorus olitorius HOM05D005803 ORTHO05D008090 5.0e-214 748.0 512 74.8
Nitab4.5_0000644g0090 Nicotiana tabacum HOM05D005803 ORTHO05D008090 3.6e-212 741.9 576 69.8
PSO832G0201 Papaver somniferum HOM05D005803 ORTHO05D008090 1.8e-211 739.6 562 68.5
HPP92_015179 Vanilla planifolia HOM05D005803 ORTHO05D008090 2.3e-211 739.2 561 68.1
ATR0706G085 Amborella trichopoda HOM05D005803 ORTHO05D008090 5.1e-211 738.0 562 66.9
Ah.13g074480 Amaranthus hybridus HOM05D005803 ORTHO05D008090 6.7e-211 737.6 542 71.0
PSO210G1989 Papaver somniferum HOM05D005803 ORTHO05D008090 1.8e-208 729.6 562 67.6
BcaB02g09144 Brassica carinata HOM05D005803 ORTHO05D008090 2.4e-208 729.2 561 67.4
Carub.0004s2114 Capsella rubella HOM05D005803 ORTHO05D008090 2.4e-208 729.2 561 68.1
AT2G39090 Arabidopsis thaliana HOM05D005803 ORTHO05D008090 6.9e-208 727.6 561 67.6
A05p07190 Brassica napus HOM05D005803 ORTHO05D008090 9.1e-208 727.2 562 67.6
BraA05t19684Z Brassica rapa HOM05D005803 ORTHO05D008090 9.1e-208 727.2 562 67.6
Sp4g21440 Schrenkiella parvula HOM05D005803 ORTHO05D008090 4.5e-207 724.9 561 67.2
Thhalv10017916m.g Eutrema salsugineum HOM05D005803 ORTHO05D008090 1.9e-205 719.5 518 70.8
MBI19_g01944_MAGBIO Magnolia biondii HOM05D005803 ORTHO05D008090 1.9e-205 719.5 519 71.3
BcaC02g12039 Brassica carinata HOM05D005803 ORTHO05D008090 3.2e-205 718.8 561 66.8
Aa31LG5G20510 Aethionema arabicum HOM05D005803 ORTHO05D008090 7.2e-205 717.6 576 66.0
C04p08600 Brassica napus HOM05D005803 ORTHO05D008090 7.9e-204 714.1 562 66.7
BolC4t22455H Brassica oleracea HOM05D005803 ORTHO05D008090 7.9e-204 714.1 561 66.7
vmacro22476 Vaccinium macrocarpon HOM05D005803 ORTHO05D008090 1.8e-203 713.0 594 65.3
CARHR133850 Cardamine hirsuta HOM05D005803 ORTHO05D008090 5.1e-203 711.4 562 66.5
AL4G36390 Arabidopsis lyrata HOM05D005803 ORTHO05D008090 5.3e-200 701.4 561 66.7
SGA_v2.0_scaffold57G20231 Striga asiatica HOM05D005803 ORTHO05D008090 9.4e-189 664.1 476 71.8
Hma1.2p1_0698F.1_g205440 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 7.0e-176 621.3 393 80.2
unitig_26.g9058 Utricularia gibba HOM05D005803 ORTHO05D008090 4.4e-170 602.1 432 68.8
Os05g0149900 Oryza sativa ssp. japonica HOM05D005803 ORTHO05D008090 7.8e-167 591.3 434 68.9
Pp3c23_6980 Physcomitrium patens HOM05D005803 ORTHO05D008090 2.3e-163 579.7 562 54.6
Mapoly0073s0077 Marchantia polymorpha HOM05D005803 ORTHO05D008090 6.8e-163 578.2 563 55.4
AUR62042651 Chenopodium quinoa HOM05D005803 ORTHO05D008090 3.9e-158 562.4 554 57.0
SMO119G0467 Selaginella moellendorffii HOM05D005803 ORTHO05D008090 4.4e-154 548.9 569 52.4
AagrBONN_evm.TU.Sc2ySwM_228.1968 Anthoceros agrestis HOM05D005803 ORTHO05D008090 1.6e-151 540.4 563 52.0
CBR_g37168 Chara braunii HOM05D005803 ORTHO05D000048 2.3e-142 510.0 568 47.9
AUR62043505 Chenopodium quinoa HOM05D005803 ORTHO05D008090 4.3e-141 505.8 382 69.6
BcaNung07183 Brassica carinata HOM05D005803 ORTHO05D008090 8.1e-140 501.5 525 55.6
Nitab4.5_0000829g0230 Nicotiana tabacum HOM05D005803 ORTHO05D008090 5.2e-139 498.8 339 78.2
TPR.G1478 Trifolium pratense HOM05D005803 ORTHO05D008090 2.9e-137 493.0 306 87.3
Zm00001eb418180 Zea mays HOM05D005803 ORTHO05D008090 8.7e-126 454.9 356 62.1
ECA240G2219 Erigeron canadensis HOM05D005803 ORTHO05D008090 1.1e-125 454.5 340 66.8
TPR.G35525 Trifolium pratense HOM05D005803 ORTHO05D008090 7.4e-125 451.8 260 85.0
CDE06G0920 Ceratophyllum demersum HOM05D005803 ORTHO05D008090 2.3e-118 430.3 349 65.0
MCO16G459 Micromonas commoda HOM05D005803 ORTHO05D008090 2.5e-80 303.9 548 37.2
Solyc01g067490.4 Solanum lycopersicum HOM05D005803 ORTHO05D008090 4.1e-67 260.0 197 67.0
Oeu032270.1 Olea europaea HOM05D005803 ORTHO05D008090 1.2e-63 248.4 144 80.6
Oeu029260.1 Olea europaea HOM05D005803 ORTHO05D008090 1.6e-63 248.1 208 66.3
TPR.G29244 Trifolium pratense HOM05D005803 ORTHO05D008090 3.7e-60 236.9 162 77.2
SEGI_31260 Sequoiadendron giganteum HOM05D005803 ORTHO05D008090 5.4e-59 233.0 180 62.2
Hma1.2p1_2251F.1_g318140 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 4.0e-54 216.9 130 80.8
ECA240G4135 Erigeron canadensis HOM05D005803 ORTHO05D008090 5.2e-54 216.5 200 63.0
TPR.G29241 Trifolium pratense HOM05D005803 ORTHO05D008090 5.8e-37 159.8 90 80.0
BcaC07g41552 Brassica carinata HOM05D000238 ORTHO05D020090 1.2e-31 142.1 189 47.1
Hma1.2p1_0055F.1_g031500 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 6.2e-31 139.8 90 74.4
BcaC09g48072 Brassica carinata HOM05D005803 ORTHO05D020090 6.8e-30 136.3 187 46.0
C06p17250 Brassica napus HOM05D005803 ORTHO05D020090 2.0e-29 134.8 167 49.7
BolC6t36924H Brassica oleracea HOM05D005803 ORTHO05D020090 2.0e-29 134.8 167 49.7
C04p44010 Brassica napus HOM05D005803 ORTHO05D020090 1.4e-27 128.6 165 48.5
AL92U10050 Arabidopsis lyrata HOM05D005803 ORTHO05D008090 1.5e-24 118.6 130 50.8
SEGI_25333 Sequoiadendron giganteum HOM05D005803 ORTHO05D020090 1.9e-24 118.2 77 72.7
Hma1.2p1_2251F.1_g318130 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 1.4e-22 112.1 129 50.4
BcaC08g44302 Brassica carinata HOM05D005803 ORTHO05D020090 1.9e-19 101.7 67 76.1
Hma1.2p1_1012F.1_g247600 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 8.7e-17 92.8 90 56.7
Atru.chr4.2782 Acer truncatum HOM05D005803 ORTHO05D008090 1.9e-16 91.7 87 58.6
SEGI_29512 Sequoiadendron giganteum HOM05D005803 ORTHO05D008090 1.4e-14 85.5 77 57.1
arahy.Tifrunner.gnm1.ann1.DY833H Arachis hypogaea HOM05D005803 ORTHO05D086144 7.6e-13 79.7 47 89.4
MCO11G723 Micromonas commoda HOM05D004454 ORTHO05D005462 2.3e-09 68.2 242 26.4


User provided reference genes

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