Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 1.5e-178 629.4 329 100.0
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.1e-152 543.5 364 79.1
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 6.8e-126 454.5 291 81.1
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 3.4e-117 425.6 332 75.9
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 2.0e-101 373.2 228 91.2
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.7e-100 370.2 228 90.4
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 5.5e-83 312.0 246 69.9
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 2.7e-82 309.7 246 69.9
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 1.1e-72 277.7 246 61.8
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 2.5e-72 276.6 246 61.0
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 3.7e-71 272.7 246 61.4
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 3.4e-69 266.2 246 58.9
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 7.7e-69 265.0 247 57.9
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 7.2e-67 258.5 243 58.8
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 3.6e-66 256.1 248 57.3
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 3.6e-66 256.1 248 57.3
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 7.9e-66 255.0 176 79.5
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 2.3e-65 253.4 248 56.9
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 1.7e-63 247.3 247 57.5
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 1.8e-62 243.8 245 56.7
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 3.1e-62 243.0 279 52.0
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 1.2e-61 241.1 271 51.7
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 1.0e-60 238.0 246 54.5
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 1.7e-60 237.3 270 53.3
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 2.9e-60 236.5 246 54.5
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 2.9e-60 236.5 242 55.0
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 5.0e-60 235.7 246 55.7
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 8.5e-60 235.0 271 52.4
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 1.1e-59 234.6 271 51.7
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 1.4e-59 234.2 271 52.0
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 3.2e-59 233.0 245 53.9
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 9.4e-59 231.5 270 53.3
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 1.2e-58 231.1 271 51.3
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 1.6e-58 230.7 271 51.7
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 2.1e-58 230.3 246 54.1
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 8.8e-57 224.9 271 49.4
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 8.8e-57 224.9 247 52.2
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 1.1e-56 224.6 246 51.6
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 1.5e-56 224.2 246 54.5
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 2.6e-56 223.4 271 49.1
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 2.6e-56 223.4 271 49.1
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 2.6e-56 223.4 271 49.1
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 3.3e-56 223.0 245 54.3
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 5.7e-56 222.2 271 48.7
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 7.4e-56 221.9 243 53.1
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 9.7e-56 221.5 271 49.1
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 9.7e-56 221.5 275 50.9
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 1.7e-55 220.7 271 49.4
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 1.7e-55 220.7 271 49.4
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 2.2e-55 220.3 271 47.6
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 3.7e-55 219.5 244 53.7
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 4.8e-55 219.2 271 50.9
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 4.8e-55 219.2 250 50.0
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 4.8e-55 219.2 251 51.4
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 8.2e-55 218.4 271 50.2
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 8.2e-55 218.4 271 49.1
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 8.2e-55 218.4 243 51.0
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 1.1e-54 218.0 271 48.7
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 2.4e-54 216.9 271 48.7
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 3.1e-54 216.5 271 49.4
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 4.1e-54 216.1 271 50.2
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 4.1e-54 216.1 271 48.7
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 4.1e-54 216.1 271 49.1
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 5.3e-54 215.7 246 52.0
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 5.3e-54 215.7 246 50.8
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 7.0e-54 215.3 271 49.8
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 7.0e-54 215.3 246 53.7
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 7.0e-54 215.3 271 48.7
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 7.0e-54 215.3 272 48.2
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 7.0e-54 215.3 272 48.5
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 9.1e-54 214.9 271 46.9
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 1.2e-53 214.5 272 47.8
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 1.2e-53 214.5 271 47.2
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 1.2e-53 214.5 272 48.5
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 1.6e-53 214.2 274 47.8
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 2.0e-53 213.8 246 51.2
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 2.0e-53 213.8 246 51.2
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 4.5e-53 212.6 271 46.9
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 5.9e-53 212.2 272 47.8
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 5.9e-53 212.2 243 49.8
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 5.9e-53 212.2 271 49.1
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 7.7e-53 211.8 271 49.1
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 1.0e-52 211.5 271 48.0
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 1.7e-52 210.7 271 47.6
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.7e-52 210.7 245 53.5
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 2.2e-52 210.3 272 48.9
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 2.9e-52 209.9 272 48.9
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 2.9e-52 209.9 272 48.5
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 3.8e-52 209.5 271 47.2
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 5.0e-52 209.1 249 51.4
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 6.5e-52 208.8 274 48.2
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 8.5e-52 208.4 276 47.1
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 8.5e-52 208.4 270 47.8
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 1.1e-51 208.0 243 49.0
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 2.5e-51 206.8 271 45.8
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 9.4e-51 204.9 244 50.4
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 1.6e-50 204.1 245 49.4
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 8.0e-50 201.8 272 46.0
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 1.0e-49 201.4 273 46.2
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 1.4e-49 201.1 268 45.1
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 2.3e-49 200.3 202 55.0
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 8.8e-49 198.4 244 48.0
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 2.6e-48 196.8 271 45.8
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 2.6e-48 196.8 271 45.0
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 7.5e-48 195.3 264 45.5
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 9.7e-48 194.9 268 44.8
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 1.3e-47 194.5 271 44.6
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 1.3e-47 194.5 246 48.8
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 1.3e-44 184.5 244 44.3
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 6.5e-44 182.2 204 51.5
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 6.5e-44 182.2 269 43.5
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 3.2e-43 179.9 272 42.6
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 9.4e-43 178.3 274 41.6
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 3.6e-42 176.4 266 42.9
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 9.8e-40 168.3 181 53.0
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 2.2e-39 167.2 230 44.8
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 1.8e-33 147.5 177 49.2
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 3.0e-33 146.7 198 44.9
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 2.0e-32 144.1 251 41.4
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 4.9e-31 139.4 189 45.0
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 2.0e-29 134.0 219 38.8
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 6.8e-25 119.0 229 35.4
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 8.3e-23 112.1 100 58.0
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 5.4e-22 109.4 220 36.8
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 1.2e-18 98.2 178 40.4
arahy.Tifrunner.gnm1.ann1.LDZY8D Arachis hypogaea HOM05D043899 ORTHO05D087184 1.1e-14 85.1 43 90.7
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 2.4e-14 84.0 293 26.3
arahy.Tifrunner.gnm1.ann1.1P1QHD Arachis hypogaea HOM05D002602 ORTHO05D002661 6.0e-13 79.3 41 90.2
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 7.8e-13 79.0 139 40.3
arahy.Tifrunner.gnm1.ann1.3I4RJY Arachis hypogaea HOM05D043899 ORTHO05D082372 3.1e-09 67.0 33 93.9


User provided reference genes

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