Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 3.1e-168 595.1 312 100.0
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 8.4e-166 587.0 312 97.4
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 2.6e-103 379.4 309 65.4
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 1.4e-96 357.1 315 62.9
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 2.4e-96 356.3 322 63.0
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 1.2e-95 354.0 324 59.3
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 5.9e-95 351.7 314 62.1
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 7.7e-95 351.3 238 72.7
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 2.2e-94 349.7 317 62.8
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 1.9e-93 346.7 313 59.4
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 2.7e-92 342.8 320 59.1
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 2.7e-92 342.8 288 62.8
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 6.1e-92 341.7 311 62.1
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 4.0e-91 339.0 313 57.8
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 4.0e-91 339.0 311 59.8
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 1.5e-90 337.0 313 59.1
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 2.0e-90 336.7 291 60.5
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 3.4e-90 335.9 234 69.2
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 9.8e-90 334.3 315 58.4
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 9.8e-90 334.3 315 59.0
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 1.7e-89 333.6 322 55.9
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 3.7e-89 332.4 322 55.9
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 8.3e-89 331.3 342 57.6
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 8.3e-89 331.3 320 58.8
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.1e-88 330.9 326 59.5
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 1.4e-88 330.5 239 66.9
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 2.4e-88 329.7 318 59.7
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 3.1e-88 329.3 317 57.4
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 5.4e-88 328.6 318 60.4
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 5.4e-88 328.6 339 56.6
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 7.0e-88 328.2 313 57.2
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.6e-87 327.0 239 66.1
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 2.0e-87 326.6 322 61.2
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 2.7e-87 326.2 241 63.9
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 2.7e-87 326.2 239 65.7
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 3.5e-87 325.9 312 57.7
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 3.5e-87 325.9 296 61.1
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 4.5e-87 325.5 239 65.7
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 4.5e-87 325.5 352 55.1
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 5.9e-87 325.1 337 56.1
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 2.9e-86 322.8 299 58.2
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 3.8e-86 322.4 316 53.8
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 3.8e-86 322.4 313 56.9
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 5.0e-86 322.0 314 57.3
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 6.5e-86 321.6 316 56.6
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 6.5e-86 321.6 316 54.4
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 8.5e-86 321.2 289 59.2
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 1.1e-85 320.9 262 61.8
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 1.1e-85 320.9 238 63.9
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 2.5e-85 319.7 267 61.0
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 4.2e-85 318.9 239 64.4
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 9.5e-85 317.8 319 58.0
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.6e-84 317.0 322 55.0
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 2.1e-84 316.6 313 57.2
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 2.1e-84 316.6 271 64.9
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 2.8e-84 316.2 315 55.6
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 3.6e-84 315.8 240 63.8
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 3.6e-84 315.8 240 63.8
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 3.6e-84 315.8 306 55.6
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 8.0e-84 314.7 238 63.9
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 1.0e-83 314.3 323 54.8
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 1.4e-83 313.9 320 57.5
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 1.4e-83 313.9 227 66.5
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 4.0e-83 312.4 321 54.8
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 5.2e-83 312.0 313 58.1
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 8.8e-83 311.2 239 62.8
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 1.2e-82 310.8 317 52.4
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 9.8e-82 307.8 360 53.9
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 2.8e-81 306.2 315 51.4
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 3.1e-80 302.8 333 54.4
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 7.0e-80 301.6 323 55.7
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 9.2e-80 301.2 340 53.5
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.2e-79 300.8 311 56.3
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 2.7e-79 299.7 211 64.5
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 2.7e-79 299.7 211 64.5
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 3.5e-79 299.3 333 54.4
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 2.9e-78 296.2 295 55.6
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 3.8e-78 295.8 306 53.3
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 1.1e-77 294.3 237 61.2
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 4.3e-77 292.4 320 53.1
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 9.5e-77 291.2 328 53.0
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 2.8e-76 289.7 308 51.6
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 2.8e-76 289.7 313 52.1
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 3.6e-76 289.3 241 61.0
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 3.6e-76 289.3 326 52.5
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 8.0e-76 288.1 325 51.1
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 5.2e-75 285.4 233 61.8
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 1.5e-74 283.9 314 51.0
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 2.0e-74 283.5 318 50.9
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 2.6e-74 283.1 318 53.8
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 9.8e-74 281.2 311 53.1
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.3e-73 278.1 278 52.9
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 1.8e-72 276.9 360 45.3
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 2.4e-72 276.6 323 50.8
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 1.6e-71 273.9 265 55.8
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 1.6e-71 273.9 224 61.2
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 4.3e-69 265.8 203 65.0
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 2.8e-68 263.1 203 64.0
Medtr5g035040 Medicago truncatula HOM05D006231 ORTHO05D007857 7.5e-66 255.0 232 59.1
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 7.0e-64 248.4 298 47.7
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 3.0e-62 243.0 322 46.9
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 5.0e-62 242.3 264 51.5
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 6.6e-62 241.9 262 48.9
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 2.1e-55 220.3 218 51.8
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 7.8e-55 218.4 181 59.1
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 1.9e-53 213.8 229 54.6
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 2.5e-53 213.4 153 69.3
SEGI_07841 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 3.3e-53 213.0 216 50.5
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 1.1e-51 208.0 185 57.3
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 1.8e-51 207.2 148 68.9
Os04g0465500 Oryza sativa ssp. japonica HOM05D006231 ORTHO05D007857 3.5e-47 193.0 245 45.3
Zm00001eb424460 Zea mays HOM05D006231 ORTHO05D007857 3.9e-46 189.5 241 46.5
SEGI_36756 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 4.3e-45 186.0 218 46.3
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 3.6e-44 183.0 234 47.4
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 9.3e-40 168.3 224 43.8
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 9.3e-40 168.3 224 43.8
Zm00001eb348680 Zea mays HOM05D006231 ORTHO05D007857 1.7e-38 164.1 238 43.3
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 5.3e-35 152.5 223 38.6
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 2.9e-33 146.7 202 42.1
Medtr5g035050 Medicago truncatula HOM05D006231 ORTHO05D007857 3.8e-33 146.4 86 83.7
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 1.7e-25 120.9 97 61.9
CBR_g40430 Chara braunii HOM05D017800 ORTHO05D019665 6.4e-25 119.0 211 35.5
AagrBONN_evm.TU.Sc2ySwM_368.2752 Anthoceros agrestis HOM05D006231 ORTHO05D007857 2.1e-23 114.0 192 38.5
TAR622G0489 Trochodendron aralioides HOM05D006231 ORTHO05D007857 5.0e-09 66.2 83 45.8
Cre10.g464750 Chlamydomonas reinhardtii HOM05D006231 ORTHO05D007857 1.9e-08 64.3 238 22.3


User provided reference genes

Program Settings