Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.FL5MRT Arachis hypogaea HOM05D017492 ORTHO05D005320 1.5e-50 202.6 106 100.0
arahy.Tifrunner.gnm1.ann1.M3MXAB Arachis hypogaea HOM05D017492 ORTHO05D083372 1.0e-22 110.2 59 89.8
arahy.Tifrunner.gnm1.ann1.J7WFLE Arachis hypogaea HOM05D017492 ORTHO05D086331 3.9e-22 108.2 57 93.0
arahy.Tifrunner.gnm1.ann1.IQMF78 Arachis hypogaea HOM05D017492 ORTHO05D084130 8.6e-22 107.1 53 100.0
arahy.Tifrunner.gnm1.ann1.CCWV51 Arachis hypogaea HOM05D017492 ORTHO05D087247 3.3e-21 105.1 53 98.1
arahy.Tifrunner.gnm1.ann1.RG91LC Arachis hypogaea HOM05D004637 ORTHO05D005320 3.7e-17 91.7 56 92.9
arahy.Tifrunner.gnm1.ann1.UI0UDP Arachis hypogaea HOM05D004637 ORTHO05D005320 3.7e-17 91.7 56 92.9
arahy.Tifrunner.gnm1.ann1.UB8UIZ Arachis hypogaea HOM05D006147 ORTHO05D007501 8.6e-14 80.5 60 75.0
arahy.Tifrunner.gnm1.ann1.I0NQT8 Arachis hypogaea HOM05D017492 ORTHO05D084729 2.1e-12 75.9 42 88.1
Lj5g0011390 Lotus japonicus HOM05D004637 ORTHO05D005320 3.2e-08 62.0 70 57.1
Phvul.001G024600 Phaseolus vulgaris HOM05D004637 ORTHO05D005320 5.4e-08 61.2 70 57.1
Glyma.14G085900 Glycine max HOM05D004637 ORTHO05D005320 7.1e-08 60.8 70 55.7
Glyma.17G238800 Glycine max HOM05D004637 ORTHO05D005320 7.1e-08 60.8 70 55.7
Migut.N02728 Erythranthe guttata HOM05D004637 ORTHO05D005320 9.2e-08 60.5 73 53.4
MD15G1077400 Malus domestica HOM05D004637 ORTHO05D005320 9.2e-08 60.5 77 53.2
Cc10_g04860 Coffea canephora HOM05D004637 ORTHO05D005320 1.2e-07 60.1 69 56.5
Eucgr.F00183 Eucalyptus grandis HOM05D004637 ORTHO05D005320 1.2e-07 60.1 71 54.9
Duzib093G0653 Durio zibethinus HOM05D004637 ORTHO05D005320 2.1e-07 59.3 70 55.7
Thecc.08G001300 Theobroma cacao HOM05D004637 ORTHO05D005320 2.1e-07 59.3 70 52.9
Rhsim07G0225500 Rhododendron simsii HOM05D004637 ORTHO05D005320 6.0e-07 57.8 72 50.0
unitig_26.g9809 Utricularia gibba HOM05D004637 ORTHO05D005320 6.0e-07 57.8 71 52.1
Atru.chr13.748 Acer truncatum HOM05D004637 ORTHO05D005320 7.8e-07 57.4 71 50.7
HanXRQChr10g0309661 Helianthus annuus HOM05D004637 ORTHO05D005320 7.8e-07 57.4 68 52.9
Medtr1g018800 Medicago truncatula HOM05D004637 ORTHO05D005320 7.8e-07 57.4 75 49.3
CSS0035210 Camellia sinensis var. sinensis HOM05D004637 ORTHO05D005320 1.3e-06 56.6 75 48.0
CiPaw.15G052200 Carya illinoinensis HOM05D004637 ORTHO05D005320 1.3e-06 56.6 70 52.9
MELO3C010837.2 Cucumis melo HOM05D004637 ORTHO05D005320 1.3e-06 56.6 70 52.9
CsaV3_2G026470 Cucumis sativus L. HOM05D004637 ORTHO05D005320 1.3e-06 56.6 70 52.9
Prupe.1G430800 Prunus persica HOM05D004637 ORTHO05D005320 1.3e-06 56.6 76 46.1
ClCG08G016150 Citrullus lanatus HOM05D004637 ORTHO05D005320 2.3e-06 55.8 70 52.9
ECA247G2514 Erigeron canadensis HOM05D004637 ORTHO05D005320 2.3e-06 55.8 73 50.7
PGR031G3707 Punica granatum HOM05D004637 ORTHO05D005320 2.3e-06 55.8 68 50.0
QL02p003978 Quercus lobata HOM05D004637 ORTHO05D005320 2.3e-06 55.8 72 47.2
Actinidia38079 Actinidia chinensis HOM05D004637 ORTHO05D005320 3.0e-06 55.5 73 49.3
Dinv35927 Davidia involucrata HOM05D004637 ORTHO05D005320 3.0e-06 55.5 70 51.4
Actinidia08272 Actinidia chinensis HOM05D004637 ORTHO05D005320 5.1e-06 54.7 72 50.0
Potri.014G023800 Populus trichocarpa HOM05D004637 ORTHO05D005320 5.1e-06 54.7 67 50.7
TPR.G3787 Trifolium pratense HOM05D004637 ORTHO05D005320 5.1e-06 54.7 70 52.9
Dinv39271 Davidia involucrata HOM05D004637 ORTHO05D005320 6.6e-06 54.3 70 51.4
Lsat_1_v5_gn_1_22460 Lactuca sativa HOM05D004637 ORTHO05D005320 6.6e-06 54.3 68 47.1
RcHm_v2.0_Chr0c32g0501551 Rosa chinensis HOM05D004637 ORTHO05D005320 6.6e-06 54.3 72 48.6
THA.LOC104824981 Tarenaya hassleriana HOM05D004637 ORTHO05D005320 6.6e-06 54.3 70 52.9
GSVIVG01009436001 Vitis vinifera HOM05D004637 ORTHO05D005320 6.6e-06 54.3 71 46.5
Ah.08g212480 Amaranthus hybridus HOM05D004637 ORTHO05D005320 8.6e-06 53.9 71 49.3
arahy.Tifrunner.gnm1.ann1.8MC24P Arachis hypogaea HOM05D017492 ORTHO05D085402 8.6e-06 53.9 35 77.1
RcHm_v2.0_Chr6g0308821 Rosa chinensis HOM05D004637 ORTHO05D005320 8.6e-06 53.9 71 47.9


User provided reference genes

Program Settings