Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.FJCJ23 Arachis hypogaea HOM05D007943 ORTHO05D010047 6.2e-54 213.8 100 100.0
Phvul.006G116500 Phaseolus vulgaris HOM05D007943 ORTHO05D010047 5.6e-23 110.9 98 54.1
TPR.G4732 Trifolium pratense HOM05D007943 ORTHO05D010047 1.3e-19 99.8 87 54.0
Lalb_Chr02g0157681 Lupinus albus HOM05D007943 ORTHO05D010047 4.2e-18 94.7 92 51.1
Glyma.19G259000 Glycine max HOM05D007943 ORTHO05D010047 5.4e-18 94.4 84 56.0
Lalb_Chr10g0100821 Lupinus albus HOM05D007943 ORTHO05D010047 5.4e-18 94.4 78 50.0
TPR.G25267 Trifolium pratense HOM05D007943 ORTHO05D010047 2.7e-17 92.0 77 48.1
Glyma.03G260100 Glycine max HOM05D007943 ORTHO05D010047 4.6e-17 91.3 104 48.1
Glyma.16G020300 Glycine max HOM05D007943 ORTHO05D010047 4.6e-17 91.3 108 42.6
Glyma.07G051200 Glycine max HOM05D007943 ORTHO05D010047 1.8e-16 89.4 92 47.8
Prupe.2G195800 Prunus persica HOM05D007943 ORTHO05D010047 1.6e-14 82.8 100 41.0
Medtr8g024630 Medicago truncatula HOM05D007943 ORTHO05D010047 2.1e-14 82.4 99 40.4
Gohir.A11G100000 Gossypium hirsutum HOM05D007943 ORTHO05D010047 4.8e-14 81.3 96 38.5
Gohir.D11G104700 Gossypium hirsutum HOM05D007943 ORTHO05D010047 4.8e-14 81.3 96 38.5
Phvul.010G118200 Phaseolus vulgaris HOM05D007943 ORTHO05D010047 1.1e-13 80.1 73 47.9
Duzib133G1419 Durio zibethinus HOM05D007943 ORTHO05D010047 2.4e-13 79.0 96 37.5
Haze_15717 Corylus avellana HOM05D007943 ORTHO05D010047 3.1e-13 78.6 91 39.6
Gorai.007G112000 Gossypium raimondii HOM05D007943 ORTHO05D010047 3.1e-13 78.6 95 37.9
Gohir.D07G139100 Gossypium hirsutum HOM05D007943 ORTHO05D010047 4.0e-13 78.2 96 39.6
Gorai.001G151200 Gossypium raimondii HOM05D007943 ORTHO05D010047 4.0e-13 78.2 96 39.6
MD07G1157400 Malus domestica HOM05D007943 ORTHO05D010047 4.0e-13 78.2 68 48.5
GSVIVG01027420001 Vitis vinifera HOM05D007943 ORTHO05D010047 6.9e-13 77.4 76 43.4
Psat4g217240 Pisum sativum HOM05D007943 ORTHO05D010047 9.0e-13 77.0 79 41.8
RcHm_v2.0_Chr1g0360861 Rosa chinensis HOM05D007943 ORTHO05D010047 9.0e-13 77.0 83 42.2
CiPaw.01G081100 Carya illinoinensis HOM05D007943 ORTHO05D010047 1.5e-12 76.3 99 39.4
Lj3g0013373 Lotus japonicus HOM05D007943 ORTHO05D010047 1.5e-12 76.3 78 43.6
Potri.014G104100 Populus trichocarpa HOM05D007943 ORTHO05D010047 1.5e-12 76.3 66 45.5
Gohir.A07G134500 Gossypium hirsutum HOM05D007943 ORTHO05D010047 2.0e-12 75.9 96 38.5
AUR62004549 Chenopodium quinoa HOM05D007943 ORTHO05D010047 3.4e-12 75.1 79 48.1
QL08p046777 Quercus lobata HOM05D007943 ORTHO05D010047 3.4e-12 75.1 91 44.0
FvH4_7g17420 Fragaria vesca HOM05D007943 ORTHO05D010047 1.0e-11 73.6 54 53.7
FAN01G2944 Fragaria x ananassa HOM05D007943 ORTHO05D010047 1.0e-11 73.6 54 53.7
FAN06G1823 Fragaria x ananassa HOM05D007943 ORTHO05D010047 1.0e-11 73.6 54 53.7
FAN10G1708 Fragaria x ananassa HOM05D007943 ORTHO05D010047 1.3e-11 73.2 54 53.7
FAN03G2903 Fragaria x ananassa HOM05D007943 ORTHO05D010047 1.7e-11 72.8 54 53.7
FAN10G0207 Fragaria x ananassa HOM05D007943 ORTHO05D010047 1.7e-11 72.8 54 53.7
MD01G1087200 Malus domestica HOM05D007943 ORTHO05D010047 2.2e-11 72.4 51 58.8
Thecc.01G335100 Theobroma cacao HOM05D007943 ORTHO05D010047 2.2e-11 72.4 83 38.6
Cfa003750 Carpinus fangiana HOM05D007943 ORTHO05D010047 2.9e-11 72.0 80 40.0
CSS0046577 Camellia sinensis var. sinensis HOM05D007943 ORTHO05D010047 6.5e-11 70.9 100 40.0
CsaV3_3G007690 Cucumis sativus L. HOM05D007943 ORTHO05D010047 6.5e-11 70.9 87 39.1
MELO3C005988.2 Cucumis melo HOM05D007943 ORTHO05D010047 1.1e-10 70.1 87 39.1
AL1G11360 Arabidopsis lyrata HOM05D007943 ORTHO05D010047 1.9e-10 69.3 73 42.5
Carub.0001s0107 Capsella rubella HOM05D007943 ORTHO05D010047 1.9e-10 69.3 64 45.3
CsaV3_3G007710 Cucumis sativus L. HOM05D007943 ORTHO05D010047 4.2e-10 68.2 94 36.2
Sabra02G0135900 Salix brachista HOM05D007943 ORTHO05D010047 5.5e-10 67.8 59 47.5
ClCG05G000500 Citrullus lanatus HOM05D007943 ORTHO05D010047 2.1e-09 65.9 69 39.1
TAR629G3284 Trochodendron aralioides HOM05D007943 ORTHO05D010047 2.7e-09 65.5 55 45.5
COL.COLO4_06217 Corchorus olitorius HOM05D007943 ORTHO05D010047 3.5e-09 65.1 87 37.9
Oeu042966.1 Olea europaea HOM05D007943 ORTHO05D010047 3.5e-09 65.1 81 39.5
Potri.002G177700 Populus trichocarpa HOM05D007943 ORTHO05D010047 4.6e-09 64.7 62 41.9
Sc23g0001870 Simmondsia chinensis HOM05D007943 ORTHO05D010047 4.6e-09 64.7 73 42.5
Manes.05G017800 Manihot esculenta HOM05D007943 ORTHO05D010047 7.9e-09 63.9 90 35.6
Hund16743 Selenicereus undatus HOM05D007943 ORTHO05D010047 7.9e-09 63.9 76 42.1
Atru.chr5.749 Acer truncatum HOM05D007943 ORTHO05D010047 1.3e-08 63.2 60 41.7
Sed0008180 Sechium edule HOM05D007943 ORTHO05D010047 1.3e-08 63.2 60 45.0
Ciclev10022962m.g Citrus clementina HOM05D007943 ORTHO05D010047 1.8e-08 62.8 57 43.9
Sed0006019 Sechium edule HOM05D007943 ORTHO05D010047 5.1e-08 61.2 83 34.9
CSS0001750 Camellia sinensis var. sinensis HOM05D007943 ORTHO05D010047 6.7e-08 60.8 71 38.0
A09p68930 Brassica napus HOM05D007943 ORTHO05D010047 8.7e-08 60.5 75 33.3
Nn3g18838 Nelumbo nucifera HOM05D007943 ORTHO05D010047 8.7e-08 60.5 84 38.1
Manes.01G241300 Manihot esculenta HOM05D007943 ORTHO05D010047 1.1e-07 60.1 65 41.5
Solyc10g009260.1 Solanum lycopersicum HOM05D007943 ORTHO05D010047 1.1e-07 60.1 73 37.0
BolC8t52866H Brassica oleracea HOM05D007943 ORTHO05D010047 4.3e-07 58.2 79 29.1
Os03g0126900 Oryza sativa ssp. japonica HOM05D007943 ORTHO05D010047 1.6e-06 56.2 68 41.2
HPP92_022237 Vanilla planifolia HOM05D007943 ORTHO05D010047 1.6e-06 56.2 70 34.3
DCAR_006654 Daucus carota HOM05D007943 ORTHO05D010047 8.2e-06 53.9 62 40.3


User provided reference genes

Program Settings