Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.FIRH26 Arachis hypogaea HOM05D007449 ORTHO05D009504 1.5e-68 262.7 127 100.0
arahy.Tifrunner.gnm1.ann1.4RN51I Arachis hypogaea HOM05D007449 ORTHO05D009504 1.2e-65 253.1 126 96.0
arahy.Tifrunner.gnm1.ann1.VWXD6N Arachis hypogaea HOM05D007449 ORTHO05D009504 1.2e-65 253.1 126 96.0
Glyma.08G160000 Glycine max HOM05D007449 ORTHO05D009504 4.9e-56 221.1 121 85.1
Glyma.15G266900 Glycine max HOM05D007449 ORTHO05D009504 1.1e-55 219.9 121 84.3
Medtr1g046590 Medicago truncatula HOM05D007449 ORTHO05D009504 5.4e-55 217.6 121 85.1
Psat6g047080 Pisum sativum HOM05D007449 ORTHO05D009504 3.5e-54 214.9 119 84.9
FAN16G1652 Fragaria x ananassa HOM05D007449 ORTHO05D009504 4.6e-54 214.5 125 78.4
Lalb_Chr01g0015631 Lupinus albus HOM05D007449 ORTHO05D009504 6.0e-54 214.2 121 83.5
Phvul.005G043600 Phaseolus vulgaris HOM05D007449 ORTHO05D009504 1.0e-53 213.4 118 84.7
FAN11G1945 Fragaria x ananassa HOM05D007449 ORTHO05D009504 6.6e-53 210.7 125 77.6
TPR.G11303 Trifolium pratense HOM05D007449 ORTHO05D009504 4.3e-52 208.0 133 75.9
Dinv42450 Davidia involucrata HOM05D007449 ORTHO05D009504 2.1e-51 205.7 120 78.3
FvH4_3g13790 Fragaria vesca HOM05D007449 ORTHO05D009504 2.8e-51 205.3 125 76.8
FAN21G0170 Fragaria x ananassa HOM05D007449 ORTHO05D009504 2.8e-51 205.3 125 76.8
Prupe.4G124700 Prunus persica HOM05D007449 ORTHO05D009504 4.7e-51 204.5 126 76.2
ClCG02G018850 Citrullus lanatus HOM05D007449 ORTHO05D009504 8.1e-51 203.8 121 79.3
RcHm_v2.0_Chr5g0022981 Rosa chinensis HOM05D007449 ORTHO05D009504 8.1e-51 203.8 125 76.0
GSVIVG01036691001 Vitis vinifera HOM05D007449 ORTHO05D009504 8.1e-51 203.8 130 75.4
Potri.010G175600 Populus trichocarpa HOM05D007449 ORTHO05D009504 1.8e-50 202.6 117 79.5
MELO3C019608.2 Cucumis melo HOM05D007449 ORTHO05D009504 3.1e-50 201.8 121 79.3
CANSAT56G2387 Cannabis sativa HOM05D007449 ORTHO05D009504 6.9e-50 200.7 117 81.2
Ciclev10006094m.g Citrus clementina HOM05D007449 ORTHO05D009504 1.2e-49 199.9 117 77.8
Sed0001463 Sechium edule HOM05D007449 ORTHO05D009504 1.2e-49 199.9 123 79.7
Lsat_1_v5_gn_7_111001 Lactuca sativa HOM05D007449 ORTHO05D009504 1.5e-49 199.5 124 74.2
Sabra10G0135300 Salix brachista HOM05D007449 ORTHO05D009504 1.5e-49 199.5 128 74.2
vmacro12790 Vaccinium macrocarpon HOM05D007449 ORTHO05D009504 2.0e-49 199.1 113 80.5
CsaV3_6G013330 Cucumis sativus L. HOM05D007449 ORTHO05D009504 3.4e-49 198.4 117 81.2
Aqoxy5G02136 Aquilegia oxysepala HOM05D007449 ORTHO05D009504 4.4e-49 198.0 117 77.8
QL04p096242 Quercus lobata HOM05D007449 ORTHO05D009504 5.8e-49 197.6 115 79.1
QL04p096050 Quercus lobata HOM05D007449 ORTHO05D009504 2.9e-48 195.3 115 78.3
CiPaw.15G111100 Carya illinoinensis HOM05D007449 ORTHO05D009504 3.8e-48 194.9 133 69.9
SEGI_20644 Sequoiadendron giganteum HOM05D007449 ORTHO05D009504 3.8e-48 194.9 126 71.4
COL.COLO4_32270 Corchorus olitorius HOM05D007449 ORTHO05D009504 6.4e-48 194.1 123 73.2
ECA236G3627 Erigeron canadensis HOM05D007449 ORTHO05D009504 8.4e-48 193.7 121 72.7
Cfa017774 Carpinus fangiana HOM05D007449 ORTHO05D009504 1.1e-47 193.4 117 76.1
HanXRQChr11g0335831 Helianthus annuus HOM05D007449 ORTHO05D009504 1.4e-47 193.0 118 74.6
Nitab4.5_0005124g0020 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.4e-47 193.0 117 76.1
MSTRG.13092 Avicennia marina HOM05D007449 ORTHO05D009504 1.9e-47 192.6 121 73.6
Hma1.2p1_1417F.1_g282110 Hydrangea macrophylla HOM05D007449 ORTHO05D009504 1.9e-47 192.6 131 71.0
MD05G1240900 Malus domestica HOM05D007449 ORTHO05D009504 3.2e-47 191.8 125 72.8
THA.LOC104812400 Tarenaya hassleriana HOM05D007449 ORTHO05D009504 4.2e-47 191.4 125 70.4
HPP92_008185 Vanilla planifolia HOM05D007449 ORTHO05D009504 7.1e-47 190.7 120 75.0
HPP92_008133 Vanilla planifolia HOM05D007449 ORTHO05D009504 9.3e-47 190.3 120 75.0
Oeu002792.1 Olea europaea HOM05D007449 ORTHO05D009775 1.2e-46 189.9 128 68.8
Duzib213G0878 Durio zibethinus HOM05D007449 ORTHO05D009504 1.6e-46 189.5 127 70.9
CSS0049228 Camellia sinensis var. sinensis HOM05D007449 ORTHO05D009504 2.1e-46 189.1 117 72.6
Migut.H01650 Erythranthe guttata HOM05D007449 ORTHO05D009504 2.1e-46 189.1 117 73.5
MBI02_g42634_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 2.1e-46 189.1 117 76.9
Nn1g09860 Nelumbo nucifera HOM05D007449 ORTHO05D009504 2.7e-46 188.7 119 74.8
TWI38G0722 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 2.7e-46 188.7 123 73.2
TWI38G2117 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 2.7e-46 188.7 123 73.2
Manes.16G050159 Manihot esculenta HOM05D007449 ORTHO05D009504 3.5e-46 188.3 126 71.4
Peaxi162Scf00124g01733 Petunia axillaris HOM05D007449 ORTHO05D009504 3.5e-46 188.3 118 71.2
Atru.chr1.9 Acer truncatum HOM05D007449 ORTHO05D009504 4.6e-46 188.0 117 76.1
Haze_18462 Corylus avellana HOM05D007449 ORTHO05D009504 6.0e-46 187.6 113 75.2
Nitab4.5_0001438g0030 Nicotiana tabacum HOM05D007449 ORTHO05D009504 7.8e-46 187.2 117 73.5
Nitab4.5_0006598g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 7.8e-46 187.2 117 73.5
Sopen11g006460 Solanum pennellii HOM05D007449 ORTHO05D009504 1.0e-45 186.8 124 69.4
Zm00001eb156770 Zea mays HOM05D007449 ORTHO05D009504 1.0e-45 186.8 121 70.2
SGA_v2.0_scaffold49G18211 Striga asiatica HOM05D007449 ORTHO05D009504 2.3e-45 185.7 117 72.6
PGSC0003DMG400013314 Solanum tuberosum HOM05D007449 ORTHO05D009504 3.0e-45 185.3 118 72.0
CAN.G222.124 Capsicum annuum HOM05D007449 ORTHO05D009504 3.9e-45 184.9 123 69.1
Solyc11g011620.3 Solanum lycopersicum HOM05D007449 ORTHO05D009504 5.1e-45 184.5 118 71.2
CDE02G1458 Ceratophyllum demersum HOM05D001125 ORTHO05D003189 8.7e-45 183.7 119 73.9
ATR0109G018 Amborella trichopoda HOM05D007449 ORTHO05D009504 1.5e-44 183.0 123 71.5
Thhalv10019230m.g Eutrema salsugineum HOM05D007449 ORTHO05D009504 1.5e-44 183.0 119 75.6
Os01g0679600 Oryza sativa ssp. japonica HOM05D007449 ORTHO05D009504 1.5e-44 183.0 121 68.6
Gohir.A13G127500 Gossypium hirsutum HOM05D007449 ORTHO05D009504 5.6e-44 181.0 118 71.2
Gohir.D13G131200 Gossypium hirsutum HOM05D007449 ORTHO05D009504 5.6e-44 181.0 118 71.2
Carub.0002s2613 Capsella rubella HOM05D007449 ORTHO05D009504 7.3e-44 180.6 126 72.2
Cc08_g13080 Coffea canephora HOM05D007449 ORTHO05D009504 7.3e-44 180.6 124 66.1
Sp5g34340 Schrenkiella parvula HOM05D007449 ORTHO05D009504 1.3e-43 179.9 124 71.8
Solyc11g011610.2 Solanum lycopersicum HOM05D007449 ORTHO05D009504 1.3e-43 179.9 123 67.5
AT1G79260 Arabidopsis thaliana HOM05D007449 ORTHO05D009504 2.1e-43 179.1 119 73.1
AL2G39860 Arabidopsis lyrata HOM05D007449 ORTHO05D009504 2.8e-43 178.7 123 71.5
BcaB05g25191 Brassica carinata HOM05D007449 ORTHO05D009504 2.8e-43 178.7 121 71.9
Rhsim10G0133000 Rhododendron simsii HOM05D007449 ORTHO05D009504 2.8e-43 178.7 157 58.6
Gorai.013G147200 Gossypium raimondii HOM05D007449 ORTHO05D009504 3.6e-43 178.3 118 70.3
Aa31LG4G1730 Aethionema arabicum HOM05D007449 ORTHO05D009504 6.2e-43 177.6 136 64.7
BolC2t09646H Brassica oleracea HOM05D007449 ORTHO05D009504 8.1e-43 177.2 121 70.2
BraA02t07273Z Brassica rapa HOM05D007449 ORTHO05D009504 8.1e-43 177.2 121 71.1
C02p36470 Brassica napus HOM05D007449 ORTHO05D009504 1.1e-42 176.8 116 71.6
BcaC03g15880 Brassica carinata HOM05D007449 ORTHO05D009504 1.4e-42 176.4 116 71.6
Pp3c6_12570 Physcomitrium patens HOM05D007449 ORTHO05D009504 1.4e-42 176.4 117 70.1
TAR629G0115 Trochodendron aralioides HOM05D007449 ORTHO05D009504 1.8e-42 176.0 160 56.2
AagrBONN_evm.TU.Sc2ySwM_362.2319 Anthoceros agrestis HOM05D007449 ORTHO05D009504 6.9e-42 174.1 117 70.1
A02p22730 Brassica napus HOM05D007449 ORTHO05D009504 6.9e-42 174.1 121 70.2
PGR031G0327 Punica granatum HOM05D007449 ORTHO05D009504 9.0e-42 173.7 129 65.9
SMO364G0724 Selaginella moellendorffii HOM05D007449 ORTHO05D009504 2.9e-40 168.7 119 65.5
Mapoly0054s0111 Marchantia polymorpha HOM05D007449 ORTHO05D009504 2.1e-38 162.5 116 63.8
Actinidia33338 Actinidia chinensis HOM05D007449 ORTHO05D009504 3.0e-37 158.7 97 76.3
DCAR_013701 Daucus carota HOM05D007449 ORTHO05D009504 8.7e-37 157.1 92 77.2
Lj2A6T27 Lonicera japonica HOM05D007449 ORTHO05D009504 4.3e-36 154.8 91 78.0
Eucgr.F04482 Eucalyptus grandis HOM05D007449 ORTHO05D009504 3.7e-35 151.8 114 61.4
Nitab4.5_0009898g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.4e-31 139.8 118 59.3
Ca_03327_v3 Cicer arietinum L. HOM05D007449 ORTHO05D009504 8.7e-29 130.6 74 85.1
FAN25G3406 Fragaria x ananassa HOM05D007449 ORTHO05D009504 3.7e-27 125.2 72 81.9
Nitab4.5_0001650g0100 Nicotiana tabacum HOM05D000057 ORTHO05D000021 1.5e-25 119.8 72 76.4
MBI02_g17887_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 3.2e-23 112.1 120 55.0
Nitab4.5_0007284g0070 Nicotiana tabacum HOM05D000057 ORTHO05D000021 1.6e-19 99.8 65 72.3
Aa31LG4G1740 Aethionema arabicum HOM05D007449 ORTHO05D009504 6.3e-19 97.8 123 40.7
TPR.G35695 Trifolium pratense HOM05D000290 ORTHO05D044376 2.9e-16 89.0 61 75.4
Glyma.14G034600 Glycine max HOM05D007449 ORTHO05D009504 2.5e-12 75.9 64 51.6
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 2.8e-11 72.4 56 62.5


User provided reference genes

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