Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.F8RHVN Arachis hypogaea HOM05D007641 ORTHO05D007630 0.0e+00 1336.6 674 100.0
arahy.Tifrunner.gnm1.ann1.4PHV2I Arachis hypogaea HOM05D007641 ORTHO05D007630 0.0e+00 1251.1 704 91.8
Glyma.18G052000 Glycine max HOM05D007641 ORTHO05D007630 4.9e-187 658.7 699 57.1
Lalb_Chr18g0054201 Lupinus albus HOM05D007641 ORTHO05D007630 5.6e-183 645.2 690 55.8
Lj6g0005873 Lotus japonicus HOM05D007641 ORTHO05D007630 7.1e-178 628.2 712 53.8
Psat5g147960 Pisum sativum HOM05D007641 ORTHO05D007630 1.4e-162 577.4 714 51.0
Phvul.006G079400 Phaseolus vulgaris HOM05D007641 ORTHO05D007630 9.3e-162 574.7 709 52.5
Medtr3g467390 Medicago truncatula HOM05D007641 ORTHO05D007630 7.3e-159 565.1 704 52.6
VMungo0540G0343 Vigna mungo HOM05D007641 ORTHO05D007630 1.3e-155 554.3 711 49.4
TPR.G13882 Trifolium pratense HOM05D007641 ORTHO05D007630 1.9e-143 513.8 640 50.2
Ca_15060_v3 Cicer arietinum L. HOM05D007641 ORTHO05D007630 2.5e-138 496.9 569 55.7
QL01p024477 Quercus lobata HOM05D007641 ORTHO05D007630 2.4e-53 214.5 742 31.0
Dinv28733 Davidia involucrata HOM05D007641 ORTHO05D007630 1.6e-52 211.8 661 31.6
Haze_24474 Corylus avellana HOM05D007641 ORTHO05D007630 4.0e-48 197.2 589 33.1
Glyma.11G198000 Glycine max HOM05D007641 ORTHO05D007630 1.1e-45 189.1 168 64.3
RcHm_v2.0_Chr5g0073231 Rosa chinensis HOM05D007641 ORTHO05D007630 1.5e-39 168.7 648 30.2
Sabra13G0126700 Salix brachista HOM05D007641 ORTHO05D002352 6.7e-35 153.3 668 30.2
CiPaw.13G063300 Carya illinoinensis HOM05D007641 ORTHO05D007630 9.6e-34 149.4 613 30.7
Atru.chr10.2293 Acer truncatum HOM05D007641 ORTHO05D007630 4.8e-33 147.1 658 29.2
Thecc.09G364100 Theobroma cacao HOM05D007641 ORTHO05D007630 4.0e-32 144.1 653 28.6
Potri.013G157800 Populus trichocarpa HOM05D007641 ORTHO05D007630 1.5e-31 142.1 647 28.9
Glyma.11G198150 Glycine max HOM05D007641 ORTHO05D007630 1.0e-30 139.4 150 53.3
Actinidia34497 Actinidia chinensis HOM05D007641 ORTHO05D007630 1.4e-29 135.6 666 27.9
vmacro14640 Vaccinium macrocarpon HOM05D007641 ORTHO05D007630 6.7e-27 126.7 665 26.8
Prupe.6G040800 Prunus persica HOM05D007641 ORTHO05D007630 1.9e-26 125.2 635 28.3
Duzib168G1492 Durio zibethinus HOM05D007641 ORTHO05D007630 2.1e-25 121.7 630 28.1
CANSAT54G2173 Cannabis sativa HOM05D007641 ORTHO05D007630 1.1e-24 119.4 640 26.9
FAN11G1956 Fragaria x ananassa HOM05D007641 ORTHO05D007630 4.1e-24 117.5 649 27.9
Nn2g10289 Nelumbo nucifera HOM05D007641 ORTHO05D007630 1.3e-22 112.5 663 27.5
Hma1.2p1_0119F.1_g056956 Hydrangea macrophylla HOM05D007641 ORTHO05D007630 3.2e-21 107.8 514 27.0
FAN25G3378 Fragaria x ananassa HOM05D007641 ORTHO05D007630 7.1e-21 106.7 592 27.7
FvH4_3g40550 Fragaria vesca HOM05D007641 ORTHO05D007630 2.5e-18 98.2 573 28.3
Gorai.004G000600 Gossypium raimondii HOM05D007641 ORTHO05D007630 4.3e-18 97.4 597 27.3
FAN16G1217 Fragaria x ananassa HOM05D007641 ORTHO05D007630 2.8e-17 94.7 565 28.3
Rhsim01G0243500 Rhododendron simsii HOM05D007641 ORTHO05D007630 4.1e-16 90.9 637 25.3
Gohir.D08G007350 Gossypium hirsutum HOM05D007641 ORTHO05D007630 5.0e-14 84.0 593 27.2
MD11G1053300 Malus domestica HOM05D007641 ORTHO05D007630 1.4e-13 82.4 317 31.9
COL.COLO4_11217 Corchorus olitorius HOM05D007641 ORTHO05D007630 4.2e-13 80.9 591 24.9
Manes.02G212232 Manihot esculenta HOM05D007641 ORTHO05D007630 7.2e-13 80.1 569 26.2
Migut.D00817 Erythranthe guttata HOM05D007641 ORTHO05D007630 1.2e-12 79.3 287 28.6
MBI15_g36478_MAGBIO Magnolia biondii HOM05D007641 ORTHO05D007630 1.2e-12 79.3 642 24.6
Sed0007856 Sechium edule HOM05D007641 ORTHO05D007630 1.0e-11 76.3 668 25.6
Gohir.D12G000401 Gossypium hirsutum HOM05D007641 ORTHO05D007630 5.1e-11 73.9 588 27.9
Gorai.012G000300 Gossypium raimondii HOM05D007641 ORTHO05D007630 5.1e-11 73.9 551 25.8
TAR633G1590 Trochodendron aralioides HOM05D007641 ORTHO05D007630 1.1e-10 72.8 448 28.6
Gohir.1Z049529 Gossypium hirsutum HOM05D007641 ORTHO05D007630 4.3e-10 70.9 457 25.4
Gohir.A08G000032 Gossypium hirsutum HOM05D007641 ORTHO05D007630 1.4e-08 65.9 586 25.6
Lj2A1102G26 Lonicera japonica HOM05D007641 ORTHO05D007630 3.1e-08 64.7 336 28.6
TWI79G1607 Tripterygium wilfordii HOM05D007641 ORTHO05D007630 3.1e-08 64.7 565 25.3
Ciclev10004023m.g Citrus clementina HOM05D007641 ORTHO05D007630 5.9e-07 60.5 123 35.8
TAR636G0755 Trochodendron aralioides HOM05D007641 ORTHO05D007630 1.3e-06 59.3 180 35.0
ClCG02G019020 Citrullus lanatus HOM05D007641 ORTHO05D007630 2.2e-06 58.5 641 23.6
MELO3C019578.2 Cucumis melo HOM05D007641 ORTHO05D007630 6.5e-06 57.0 643 25.3


User provided reference genes

Program Settings