Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.F7VJVA Arachis hypogaea HOM05D007361 ORTHO05D009239 1.7e-103 379.4 196 100.0
arahy.Tifrunner.gnm1.ann1.LM2PGP Arachis hypogaea HOM05D007361 ORTHO05D009239 3.9e-76 288.5 187 79.1
Lj4g0006418 Lotus japonicus HOM05D007361 ORTHO05D009239 3.1e-41 172.6 170 59.4
Lalb_Chr09g0332251 Lupinus albus HOM05D007361 ORTHO05D009239 1.1e-38 164.1 159 64.2
Phvul.002G299900 Phaseolus vulgaris HOM05D007361 ORTHO05D009239 1.0e-36 157.5 173 52.0
Ca_17469_v3 Cicer arietinum L. HOM05D007361 ORTHO05D009239 1.9e-35 153.3 170 54.1
Manes.01G052200 Manihot esculenta HOM05D007361 ORTHO05D009239 3.3e-35 152.5 182 52.7
Cpa.g.sc634.2 Carica papaya HOM05D007361 ORTHO05D009239 1.3e-34 150.6 88 78.4
TPR.G3427 Trifolium pratense HOM05D007361 ORTHO05D009239 1.6e-34 150.2 176 51.7
Medtr8g099615 Medicago truncatula HOM05D007361 ORTHO05D009239 3.7e-34 149.1 162 53.7
PSO782G1801 Papaver somniferum HOM05D007361 ORTHO05D009239 3.7e-34 149.1 124 60.5
Glyma.08G024100 Glycine max HOM05D007361 ORTHO05D009239 1.8e-33 146.7 115 67.0
GSVIVG01019560001 Vitis vinifera HOM05D007361 ORTHO05D009239 2.4e-33 146.4 90 77.8
Potri.001G089500 Populus trichocarpa HOM05D007361 ORTHO05D009239 4.0e-33 145.6 176 49.4
TWI60G0282 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 5.3e-33 145.2 156 53.8
RcHm_v2.0_Chr7g0194141 Rosa chinensis HOM05D007361 ORTHO05D009239 6.9e-33 144.8 148 54.1
Carub.0007s3327 Capsella rubella HOM05D007361 ORTHO05D009239 2.0e-32 143.3 108 66.7
Glyma.05G218000 Glycine max HOM05D007361 ORTHO05D009239 2.0e-32 143.3 156 53.2
TAR629G1962 Trochodendron aralioides HOM05D007361 ORTHO05D009239 2.0e-32 143.3 166 50.6
Psat7g024200 Pisum sativum HOM05D007361 ORTHO05D009239 3.4e-32 142.5 114 64.0
Prupe.5G122800 Prunus persica HOM05D007361 ORTHO05D009239 3.4e-32 142.5 151 51.7
MELO3C016276.2 Cucumis melo HOM05D007361 ORTHO05D009239 4.5e-32 142.1 100 67.0
Eucgr.D01759 Eucalyptus grandis HOM05D007361 ORTHO05D009239 4.5e-32 142.1 70 90.0
Peaxi162Scf00074g00624 Petunia axillaris HOM05D007361 ORTHO05D009239 4.5e-32 142.1 86 75.6
CsaV3_4G006730 Cucumis sativus L. HOM05D007361 ORTHO05D009239 5.8e-32 141.7 96 69.8
Nn1g00257 Nelumbo nucifera HOM05D007361 ORTHO05D009239 7.6e-32 141.4 73 86.3
Potri.003G141700 Populus trichocarpa HOM05D007361 ORTHO05D009239 7.6e-32 141.4 66 92.4
PGR031G2691 Punica granatum HOM05D007361 ORTHO05D009239 9.9e-32 141.0 132 58.3
Aqoxy5G04283 Aquilegia oxysepala HOM05D007361 ORTHO05D009239 1.3e-31 140.6 91 74.7
THA.LOC104817582 Tarenaya hassleriana HOM05D007361 ORTHO05D009239 1.3e-31 140.6 130 58.5
HPP92_002926 Vanilla planifolia HOM05D007361 ORTHO05D009239 1.7e-31 140.2 165 49.7
ClCG07G011490 Citrullus lanatus HOM05D007361 ORTHO05D009239 2.9e-31 139.4 110 62.7
Duzib205G2046 Durio zibethinus HOM05D007361 ORTHO05D009239 2.9e-31 139.4 89 75.3
ECA246G3595 Erigeron canadensis HOM05D007361 ORTHO05D009239 2.9e-31 139.4 99 66.7
Sabra01G0065600 Salix brachista HOM05D007361 ORTHO05D009239 2.9e-31 139.4 65 92.3
Sabra03G0102300 Salix brachista HOM05D007361 ORTHO05D009239 2.9e-31 139.4 66 90.9
Thecc.03G300700 Theobroma cacao HOM05D007361 ORTHO05D009239 2.9e-31 139.4 91 72.5
FvH4_5g04930 Fragaria vesca HOM05D007361 ORTHO05D009239 3.8e-31 139.0 148 59.5
FAN18G1776 Fragaria x ananassa HOM05D007361 ORTHO05D009239 3.8e-31 139.0 148 59.5
CiPaw.12G081300 Carya illinoinensis HOM05D007361 ORTHO05D009239 4.9e-31 138.7 76 80.3
QL02p030053 Quercus lobata HOM05D007361 ORTHO05D009239 4.9e-31 138.7 174 50.0
Dinv37514 Davidia involucrata HOM05D007361 ORTHO05D009239 6.4e-31 138.3 71 85.9
FAN13G1516 Fragaria x ananassa HOM05D007361 ORTHO05D009239 6.4e-31 138.3 148 59.5
Nitab4.5_0000798g0080 Nicotiana tabacum HOM05D007361 ORTHO05D009239 8.4e-31 137.9 167 47.9
Actinidia27311 Actinidia chinensis HOM05D007361 ORTHO05D009239 1.1e-30 137.5 66 90.9
Sed0017120 Sechium edule HOM05D007361 ORTHO05D009239 1.1e-30 137.5 101 65.3
Sc01g0010390 Simmondsia chinensis HOM05D007361 ORTHO05D009239 1.1e-30 137.5 89 71.9
Actinidia22174 Actinidia chinensis HOM05D005144 ORTHO05D006112 1.4e-30 137.1 106 66.0
FAN18G2902 Fragaria x ananassa HOM05D007361 ORTHO05D009239 1.4e-30 137.1 148 58.1
Nitab4.5_0008496g0040 Nicotiana tabacum HOM05D007361 ORTHO05D009239 1.4e-30 137.1 86 73.3
Os01g0235100 Oryza sativa ssp. japonica HOM05D007361 ORTHO05D009239 1.9e-30 136.7 90 71.1
AT5G42070 Arabidopsis thaliana HOM05D007361 ORTHO05D009239 2.5e-30 136.3 117 56.4
Cc08_g16280 Coffea canephora HOM05D007361 ORTHO05D009239 2.5e-30 136.3 89 69.7
TWI81G0394 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 3.2e-30 136.0 68 88.2
Aa31LG9G130 Aethionema arabicum HOM05D007361 ORTHO05D009239 5.5e-30 135.2 91 71.4
Ah.12g052700 Amaranthus hybridus HOM05D007361 ORTHO05D009239 5.5e-30 135.2 71 83.1
Ciclev10024054m.g Citrus clementina HOM05D007361 ORTHO05D009239 5.5e-30 135.2 115 60.9
Hund14207 Selenicereus undatus HOM05D007361 ORTHO05D009239 5.5e-30 135.2 110 63.6
PGSC0003DMG400012265 Solanum tuberosum HOM05D007361 ORTHO05D009239 5.5e-30 135.2 92 69.6
A07p21120 Brassica napus HOM05D007361 ORTHO05D009239 1.2e-29 134.0 89 70.8
AUR62019861 Chenopodium quinoa HOM05D007361 ORTHO05D009239 1.2e-29 134.0 88 69.3
ATR0602G025 Amborella trichopoda HOM05D007361 ORTHO05D009239 1.6e-29 133.7 142 53.5
BraA07t29798Z Brassica rapa HOM05D007361 ORTHO05D009239 1.6e-29 133.7 89 73.0
CDE10G0255 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 1.6e-29 133.7 88 68.2
HanXRQChr17g0534961 Helianthus annuus HOM05D007361 ORTHO05D009239 1.6e-29 133.7 98 65.3
Lj2C163G16 Lonicera japonica HOM05D005144 ORTHO05D006112 1.6e-29 133.7 66 89.4
vmacro11341 Vaccinium macrocarpon HOM05D007361 ORTHO05D009239 1.6e-29 133.7 79 78.5
CANSAT21G1668 Cannabis sativa HOM05D007361 ORTHO05D009239 2.1e-29 133.3 151 53.0
CDE10G0162 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 2.1e-29 133.3 88 68.2
Thhalv10026457m.g Eutrema salsugineum HOM05D007361 ORTHO05D009239 2.1e-29 133.3 136 55.1
BcaB02g07865 Brassica carinata HOM05D007361 ORTHO05D009239 3.5e-29 132.5 78 78.2
SEGI_33878 Sequoiadendron giganteum HOM05D007361 ORTHO05D009239 3.5e-29 132.5 152 49.3
DCAR_006523 Daucus carota HOM05D007361 ORTHO05D009239 4.6e-29 132.1 122 59.0
Sopen08g030820 Solanum pennellii HOM05D007361 ORTHO05D009239 4.6e-29 132.1 162 52.5
BcaC02g08893 Brassica carinata HOM05D007361 ORTHO05D009239 7.9e-29 131.3 72 79.2
C04p49390 Brassica napus HOM05D007361 ORTHO05D009239 7.9e-29 131.3 72 79.2
Gohir.A12G237900 Gossypium hirsutum HOM05D007361 ORTHO05D009239 7.9e-29 131.3 170 48.2
SalBow8G1606 Salvia bowleyana HOM05D007361 ORTHO05D009239 7.9e-29 131.3 68 82.4
Solyc08g082570.4 Solanum lycopersicum HOM05D007361 ORTHO05D009239 7.9e-29 131.3 99 61.6
MSTRG.1799 Avicennia marina HOM05D007361 ORTHO05D009239 1.0e-28 131.0 85 69.4
BcaC08g44581 Brassica carinata HOM05D007361 ORTHO05D009239 1.0e-28 131.0 76 78.9
C06p20480 Brassica napus HOM05D007361 ORTHO05D009239 1.0e-28 131.0 76 78.9
BolC6t37229H Brassica oleracea HOM05D000331 ORTHO05D000732 1.0e-28 131.0 76 78.9
CAN.G567.14 Capsicum annuum HOM05D007361 ORTHO05D009239 1.3e-28 130.6 77 75.3
BolC4t26525H Brassica oleracea HOM05D000331 ORTHO05D000732 1.8e-28 130.2 87 70.1
Sp7g00060 Schrenkiella parvula HOM05D007361 ORTHO05D009239 1.8e-28 130.2 90 71.1
EL10Ac5g12938 Beta vulgaris HOM05D007361 ORTHO05D009239 2.3e-28 129.8 66 84.8
Gohir.D12G239000 Gossypium hirsutum HOM05D007361 ORTHO05D009239 2.3e-28 129.8 151 51.0
SGA_v2.0_scaffold111G31398 Striga asiatica HOM05D007361 ORTHO05D009239 2.3e-28 129.8 65 83.1
Gorai.008G256100 Gossypium raimondii HOM05D007361 ORTHO05D009239 3.0e-28 129.4 145 52.4
Atru.chr9.1927 Acer truncatum HOM05D001889 ORTHO05D009239 5.1e-28 128.6 79 77.2
CARHR212500 Cardamine hirsuta HOM05D007361 ORTHO05D009239 5.1e-28 128.6 90 66.7
Haze_09090 Corylus avellana HOM05D007361 ORTHO05D009239 5.1e-28 128.6 109 63.3
A04p15160 Brassica napus HOM05D007361 ORTHO05D009239 8.7e-28 127.9 78 73.1
CSS0025387 Camellia sinensis var. sinensis HOM05D007361 ORTHO05D009239 8.7e-28 127.9 155 51.0
Migut.E01281 Erythranthe guttata HOM05D007361 ORTHO05D009239 1.1e-27 127.5 66 81.8
unitig_0.g323 Utricularia gibba HOM05D007361 ORTHO05D009239 1.6e-26 123.6 150 46.0
Mapoly0039s0013 Marchantia polymorpha HOM05D007361 ORTHO05D009239 2.1e-26 123.2 76 72.4
Rhsim02G0246000 Rhododendron simsii HOM05D007361 ORTHO05D009239 1.4e-25 120.6 96 61.5
AagrBONN_evm.TU.Sc2ySwM_362.1194 Anthoceros agrestis HOM05D007361 ORTHO05D009239 4.0e-25 119.0 66 77.3
SMO340G0222 Selaginella moellendorffii HOM05D007361 ORTHO05D009239 7.6e-24 114.8 82 64.6
Lsat_1_v5_gn_3_11260 Lactuca sativa HOM05D007361 ORTHO05D009239 1.1e-22 110.9 93 61.3
Pp3c20_23090 Physcomitrium patens HOM05D007361 ORTHO05D009239 1.1e-22 110.9 64 71.9
CBR_g8730 Chara braunii HOM05D003343 ORTHO05D003787 3.5e-21 105.9 69 63.8
MCO14G090 Micromonas commoda HOM05D007361 ORTHO05D009239 1.4e-14 84.0 66 51.5
Cre02.g074100 Chlamydomonas reinhardtii HOM05D007361 ORTHO05D009239 7.9e-13 78.2 78 43.6
PRCOL_00001131 Prasinoderma coloniale HOM05D007361 ORTHO05D009239 1.3e-07 60.8 61 45.9
MBI06_g44793_MAGBIO Magnolia biondii HOM05D007361 ORTHO05D009239 2.5e-06 56.6 57 52.6


User provided reference genes

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