Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 6.4e-135 484.6 342 100.0
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 9.9e-120 434.1 345 84.6
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 2.6e-112 409.5 343 78.7
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 6.0e-109 398.3 349 78.2
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 3.2e-94 349.4 310 77.4
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 7.7e-88 328.2 182 92.9
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 1.6e-53 214.2 364 51.4
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 9.8e-51 204.9 255 58.0
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 4.1e-49 199.5 274 62.8
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 1.6e-45 187.6 275 60.0
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 1.0e-44 184.9 360 47.2
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 1.2e-43 181.4 271 59.8
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 2.4e-41 173.7 280 56.8
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 7.0e-41 172.2 290 52.8
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 1.2e-40 171.4 271 55.7
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 2.5e-38 163.7 287 56.1
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 2.5e-30 137.1 267 40.8
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 4.3e-30 136.3 279 44.8
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 1.1e-28 131.7 121 53.7
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 3.1e-28 130.2 121 52.9
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 6.8e-28 129.0 266 40.6
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 2.6e-27 127.1 273 35.2
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 3.4e-27 126.7 257 43.6
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 4.4e-27 126.3 277 44.4
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 7.5e-27 125.6 259 43.2
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 4.9e-26 122.9 249 50.6
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 8.3e-26 122.1 285 47.0
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 1.1e-25 121.7 292 42.1
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 1.4e-25 121.3 258 45.0
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 1.9e-25 120.9 249 48.6
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 2.4e-25 120.6 123 52.0
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 2.4e-25 120.6 289 42.9
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 2.4e-25 120.6 249 35.3
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 4.1e-25 119.8 122 50.8
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 9.2e-25 118.6 138 47.8
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 1.2e-24 118.2 291 34.4
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 2.1e-24 117.5 258 39.5
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 3.5e-24 116.7 276 43.8
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 4.6e-24 116.3 110 56.4
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 6.0e-24 115.9 110 51.8
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 6.0e-24 115.9 278 44.2
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 1.3e-23 114.8 282 38.7
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 1.3e-23 114.8 117 50.4
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 1.3e-23 114.8 132 47.7
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 1.7e-23 114.4 253 42.7
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 2.3e-23 114.0 273 45.4
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 3.0e-23 113.6 139 44.6
arahy.Tifrunner.gnm1.ann1.V4J88K Arachis hypogaea HOM05D005773 ORTHO05D006930 5.1e-23 112.8 115 68.7
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 5.1e-23 112.8 252 44.0
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 5.1e-23 112.8 252 44.0
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 5.1e-23 112.8 266 43.2
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 8.6e-23 112.1 196 35.7
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 8.6e-23 112.1 198 35.9
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 8.6e-23 112.1 198 35.9
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 1.5e-22 111.3 250 41.2
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 1.5e-22 111.3 250 44.4
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 1.9e-22 110.9 249 41.0
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 1.9e-22 110.9 252 44.0
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 1.9e-22 110.9 102 53.9
PGR004G1534 Punica granatum HOM05D005773 ORTHO05D006930 4.3e-22 109.8 106 57.5
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 5.6e-22 109.4 252 43.7
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 9.5e-22 108.6 254 30.7
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 1.6e-21 107.8 123 48.0
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.6e-21 107.8 252 38.9
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 1.6e-21 107.8 97 58.8
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 2.1e-21 107.5 101 53.5
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 3.6e-21 106.7 119 48.7
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 4.7e-21 106.3 112 47.3
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 8.1e-21 105.5 260 40.4
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 8.1e-21 105.5 250 33.6
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 1.4e-20 104.8 250 33.6
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.8e-20 104.4 128 46.1
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 1.8e-20 104.4 110 51.8
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 3.1e-20 103.6 264 42.0
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 3.1e-20 103.6 300 37.3
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 4.0e-20 103.2 98 56.1
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 4.0e-20 103.2 117 49.6
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 4.0e-20 103.2 263 41.8
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 5.2e-20 102.8 100 56.0
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 5.2e-20 102.8 159 40.9
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 6.8e-20 102.4 180 35.6
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 1.2e-19 101.7 99 53.5
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 1.2e-19 101.7 112 49.1
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 1.2e-19 101.7 116 46.6
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 2.0e-19 100.9 128 40.6
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 2.6e-19 100.5 290 41.0
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 3.4e-19 100.1 251 40.6
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 3.4e-19 100.1 103 49.5
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 3.4e-19 100.1 117 48.7
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 3.4e-19 100.1 302 38.7
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 7.6e-19 99.0 124 44.4
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 7.6e-19 99.0 301 36.2
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.3e-18 98.2 244 48.8
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 1.3e-18 98.2 123 46.3
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 1.3e-18 98.2 101 53.5
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 2.2e-18 97.4 133 44.4
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 2.9e-18 97.1 101 49.5
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 2.9e-18 97.1 135 44.4
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 8.4e-18 95.5 281 32.0
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 8.4e-18 95.5 135 45.9
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 1.1e-17 95.1 123 43.1
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 4.2e-17 93.2 99 51.5
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 4.2e-17 93.2 221 33.0
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 7.1e-17 92.4 96 50.0
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 1.2e-16 91.7 100 46.0
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 1.6e-16 91.3 100 47.0
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 2.1e-16 90.9 255 35.3
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 3.5e-16 90.1 289 32.2
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 7.8e-16 89.0 203 32.5
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 1.7e-15 87.8 235 42.1
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 1.7e-15 87.8 251 35.5
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 1.5e-14 84.7 276 36.6
arahy.Tifrunner.gnm1.ann1.ASXI8Q Arachis hypogaea HOM05D005773 ORTHO05D006930 2.5e-14 84.0 97 53.6
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 2.5e-14 84.0 251 27.5
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 5.3e-12 76.3 129 34.1
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 1.5e-11 74.7 95 41.1
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 4.4e-11 73.2 64 57.8
Hma1.2p1_1067F.1_g253800 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 1.7e-10 71.2 84 44.0
TAR625G0572 Trochodendron aralioides HOM05D005773 ORTHO05D006930 4.6e-08 63.2 52 59.6
Pp3c14_16980 Physcomitrium patens HOM05D029403 ORTHO05D006930 3.0e-07 60.5 102 37.3
Atru.chr9.2474 Acer truncatum HOM05D000366 ORTHO05D001950 5.1e-07 59.7 98 40.8
Mapoly0035s0141 Marchantia polymorpha HOM05D005773 ORTHO05D006930 6.6e-07 59.3 91 38.5
CARHR041400 Cardamine hirsuta HOM05D005773 ORTHO05D006930 8.7e-07 58.9 56 53.6
Pp3c17_20330 Physcomitrium patens HOM05D029403 ORTHO05D006930 1.1e-06 58.5 57 49.1
SMO356G0556 Selaginella moellendorffii HOM05D005773 ORTHO05D006930 1.5e-06 58.2 57 42.1


User provided reference genes

Program Settings