Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.F2WWIZ Arachis hypogaea HOM05D005855 ORTHO05D006406 1.1e-273 946.0 506 100.0
arahy.Tifrunner.gnm1.ann1.8C47BX Arachis hypogaea HOM05D005855 ORTHO05D006406 5.5e-260 900.6 506 96.0
Lalb_Chr21g0311491 Lupinus albus HOM05D005855 ORTHO05D006406 3.5e-105 386.3 475 50.1
Lalb_Chr03g0038151 Lupinus albus HOM05D005855 ORTHO05D006406 2.1e-102 377.1 502 47.6
Lj1g0024601 Lotus japonicus HOM05D005855 ORTHO05D006406 8.1e-102 375.2 496 47.2
Glyma.18G244800 Glycine max HOM05D005855 ORTHO05D006406 3.1e-101 373.2 498 47.4
Glyma.09G248000 Glycine max HOM05D005855 ORTHO05D006406 7.6e-100 368.6 498 46.4
TPR.G31229 Trifolium pratense HOM05D005855 ORTHO05D006406 2.9e-99 366.7 503 44.9
Ca_08015_v3 Cicer arietinum L. HOM05D005855 ORTHO05D006406 6.0e-97 359.0 502 45.0
Phvul.008G051800 Phaseolus vulgaris HOM05D005855 ORTHO05D006406 5.3e-93 345.9 502 43.6
FvH4_6g00081 Fragaria vesca HOM05D005855 ORTHO05D006406 7.6e-92 342.0 496 45.2
FAN14G2818 Fragaria x ananassa HOM05D005855 ORTHO05D006406 7.6e-92 342.0 496 45.4
arahy.Tifrunner.gnm1.ann1.VEFL47 Arachis hypogaea HOM05D005855 ORTHO05D006406 3.2e-90 336.7 503 43.7
arahy.Tifrunner.gnm1.ann1.65FHJK Arachis hypogaea HOM05D005855 ORTHO05D006406 4.2e-90 336.3 495 44.2
VMungo1383G1707 Vigna mungo HOM05D005855 ORTHO05D006406 2.7e-89 333.6 496 44.6
Psat3g103080 Pisum sativum HOM05D005855 ORTHO05D006406 1.1e-87 328.2 504 42.3
QL01p051691 Quercus lobata HOM05D005855 ORTHO05D006406 4.3e-87 326.2 496 42.5
QL01p051722 Quercus lobata HOM05D005855 ORTHO05D006406 4.3e-87 326.2 496 42.5
Haze_04608 Corylus avellana HOM05D005855 ORTHO05D006406 5.6e-87 325.9 493 43.4
MD12G1261700 Malus domestica HOM05D005855 ORTHO05D006406 9.6e-87 325.1 501 42.3
FAN02G1917 Fragaria x ananassa HOM05D005855 ORTHO05D006406 1.3e-86 324.7 496 43.3
QL01p051710 Quercus lobata HOM05D005855 ORTHO05D006406 3.6e-86 323.2 508 41.9
RcHm_v2.0_Chr3g0447421 Rosa chinensis HOM05D005855 ORTHO05D006406 1.4e-85 321.2 496 42.9
Prupe.6G365000 Prunus persica HOM05D005855 ORTHO05D006406 1.8e-85 320.9 503 41.7
Medtr7g080500 Medicago truncatula HOM05D005855 ORTHO05D006406 3.2e-82 310.1 504 39.9
FAN09G4305 Fragaria x ananassa HOM05D005855 ORTHO05D006406 7.9e-81 305.4 521 42.2
Manes.13G000700 Manihot esculenta HOM05D005855 ORTHO05D006406 6.7e-80 302.4 496 40.3
Atru.chr2.218 Acer truncatum HOM05D005855 ORTHO05D006406 1.8e-77 294.3 495 40.6
CiPaw.08G111900 Carya illinoinensis HOM05D005855 ORTHO05D006406 9.0e-77 292.0 505 41.0
MD00G1017400 Malus domestica HOM05D005855 ORTHO05D006406 9.0e-77 292.0 510 40.4
vmacro08871 Vaccinium macrocarpon HOM05D005855 ORTHO05D006406 9.0e-77 292.0 502 39.2
Dinv17130 Davidia involucrata HOM05D005855 ORTHO05D006406 1.0e-75 288.5 506 39.5
Rhsim04G0133000 Rhododendron simsii HOM05D005855 ORTHO05D006406 4.2e-74 283.1 501 37.5
MELO3C008612.2 Cucumis melo HOM05D005855 ORTHO05D006406 7.1e-74 282.3 498 38.6
Hund21931 Selenicereus undatus HOM05D005855 ORTHO05D006406 2.1e-73 280.8 491 38.3
CsaV3_2G010280 Cucumis sativus L. HOM05D005855 ORTHO05D006406 7.9e-73 278.9 499 38.5
TAR633G1091 Trochodendron aralioides HOM05D005855 ORTHO05D006406 7.9e-73 278.9 501 38.1
Eucgr.B01457 Eucalyptus grandis HOM05D005855 ORTHO05D006406 2.3e-72 277.3 496 39.7
COL.COLO4_22931 Corchorus olitorius HOM05D005855 ORTHO05D006406 1.1e-71 275.0 499 39.3
Migut.F01842 Erythranthe guttata HOM05D005855 ORTHO05D006406 5.7e-71 272.7 485 38.4
Actinidia19643 Actinidia chinensis HOM05D005855 ORTHO05D006406 7.4e-71 272.3 488 37.3
Sed0023015 Sechium edule HOM05D005855 ORTHO05D006406 9.6e-71 271.9 501 38.5
Lj8C197T11 Lonicera japonica HOM05D005855 ORTHO05D006406 3.7e-70 270.0 508 39.2
Gohir.A13G090000 Gossypium hirsutum HOM05D005855 ORTHO05D006406 6.3e-70 269.2 510 38.6
TAR362G1086 Trochodendron aralioides HOM05D005855 ORTHO05D006406 6.3e-70 269.2 496 37.7
Potri.008G077800 Populus trichocarpa HOM05D005855 ORTHO05D006406 8.2e-70 268.9 491 38.3
Sabra08G0057900 Salix brachista HOM05D005855 ORTHO05D006406 8.2e-70 268.9 484 38.4
Gohir.A02G107108 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.1e-69 268.5 481 39.1
PGR031G3878 Punica granatum HOM05D005855 ORTHO05D006406 1.4e-69 268.1 501 38.9
AUR62000270 Chenopodium quinoa HOM05D005855 ORTHO05D006406 1.8e-69 267.7 502 37.5
CANSAT64G2413 Cannabis sativa HOM05D005855 ORTHO05D006406 4.1e-69 266.5 499 39.1
MSTRG.8191 Avicennia marina HOM05D005855 ORTHO05D006406 5.3e-69 266.2 506 37.5
Gorai.002G148000 Gossypium raimondii HOM05D005855 ORTHO05D006406 5.3e-69 266.2 510 38.4
Aqoxy2G04154 Aquilegia oxysepala HOM05D005855 ORTHO05D006406 3.4e-68 263.5 519 36.4
Potri.002G209795 Populus trichocarpa HOM05D005855 ORTHO05D006406 5.0e-67 259.6 450 40.2
SGA_v2.0_scaffold122G33208 Striga asiatica HOM05D005855 ORTHO05D006406 5.0e-67 259.6 507 36.9
Ah.04g159310 Amaranthus hybridus HOM05D005855 ORTHO05D006406 6.5e-67 259.2 491 37.3
PSO017G4019 Papaver somniferum HOM05D005855 ORTHO05D006406 6.5e-67 259.2 498 37.6
Ciclev10000302m.g Citrus clementina HOM05D005855 ORTHO05D006406 1.1e-66 258.5 497 37.0
Actinidia07922 Actinidia chinensis HOM05D005855 ORTHO05D006406 2.5e-66 257.3 496 37.3
Nitab4.5_0001003g0160 Nicotiana tabacum HOM05D005855 ORTHO05D006406 4.2e-66 256.5 480 39.4
PSO573G0046 Papaver somniferum HOM05D005855 ORTHO05D006406 4.2e-66 256.5 495 37.0
PGSC0003DMG400016248 Solanum tuberosum HOM05D005855 ORTHO05D006406 1.2e-65 255.0 486 38.7
Cc09_g04110 Coffea canephora HOM05D005855 ORTHO05D006406 3.6e-65 253.4 499 37.5
ClCG11G010010 Citrullus lanatus HOM05D005855 ORTHO05D006406 1.0e-64 251.9 484 37.2
Sc16g0010640 Simmondsia chinensis HOM05D005855 ORTHO05D006406 1.0e-64 251.9 466 38.4
Nitab4.5_0003928g0050 Nicotiana tabacum HOM05D005855 ORTHO05D006406 1.3e-64 251.5 523 37.5
MBI07_g11487_MAGBIO Magnolia biondii HOM05D005855 ORTHO05D006406 2.3e-64 250.8 532 35.2
THA.LOC104805689 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 2.3e-64 250.8 493 36.5
Sp5g20320 Schrenkiella parvula HOM05D005855 ORTHO05D006406 3.0e-64 250.4 495 38.2
Peaxi162Scf00254g00712 Petunia axillaris HOM05D005855 ORTHO05D006406 3.9e-64 250.0 503 36.8
THA.LOC104822010 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 5.1e-64 249.6 503 36.4
Sopen11g004450 Solanum pennellii HOM05D005855 ORTHO05D006406 1.1e-63 248.4 492 37.0
Solyc11g008670.2 Solanum lycopersicum HOM05D005855 ORTHO05D006406 4.3e-63 246.5 492 36.8
Duzib177G0112 Durio zibethinus HOM05D005855 ORTHO05D006406 5.7e-63 246.1 507 37.7
Thhalv10018127m.g Eutrema salsugineum HOM05D005855 ORTHO05D006406 1.6e-62 244.6 490 36.5
Gorai.003G087300 Gossypium raimondii HOM05D005855 ORTHO05D006406 1.6e-62 244.6 487 37.4
CARHR057120 Cardamine hirsuta HOM05D005855 ORTHO05D006406 2.8e-62 243.8 494 37.0
Gohir.D03G072500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 4.8e-62 243.0 488 37.3
TWI18G0231 Tripterygium wilfordii HOM05D005855 ORTHO05D006406 1.1e-61 241.9 486 37.4
CAN.G321.5 Capsicum annuum HOM05D005855 ORTHO05D006406 1.4e-61 241.5 508 37.6
DCAR_031596 Daucus carota HOM05D005855 ORTHO05D006406 4.1e-61 240.0 503 35.4
Gohir.D13G093500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 2.6e-60 237.3 507 36.7
Thecc.05G112200 Theobroma cacao HOM05D005855 ORTHO05D006406 1.0e-59 235.3 459 38.6
ECA232G0592 Erigeron canadensis HOM05D005855 ORTHO05D006406 1.3e-59 235.0 502 35.3
TWI36G1346 Tripterygium wilfordii HOM05D000941 ORTHO05D006406 1.3e-59 235.0 484 36.4
Lsat_1_v5_gn_0_14480 Lactuca sativa HOM05D005855 ORTHO05D006406 6.5e-59 232.6 485 34.6
AT1G65470 Arabidopsis thaliana HOM05D005855 ORTHO05D006406 1.1e-58 231.9 491 37.1
AUR62006618 Chenopodium quinoa HOM05D005855 ORTHO05D006406 1.9e-58 231.1 486 35.0
Os01g0896300 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 3.2e-58 230.3 517 35.4
AL2G22160 Arabidopsis lyrata HOM05D005855 ORTHO05D006406 6.1e-57 226.1 489 36.4
SGA_v2.0_scaffold340G49313 Striga asiatica HOM05D005855 ORTHO05D006406 2.3e-56 224.2 495 34.1
Aa31LG2G2480 Aethionema arabicum HOM05D005855 ORTHO05D006406 3.0e-56 223.8 487 35.5
Oeu034710.1 Olea europaea HOM05D005855 ORTHO05D006406 5.1e-56 223.0 477 35.2
EL10Ac4g10026 Beta vulgaris HOM05D005855 ORTHO05D006406 1.1e-55 221.9 497 34.0
HanXRQChr16g0511741 Helianthus annuus HOM05D005855 ORTHO05D006406 7.4e-55 219.2 501 34.9
Zm00001eb365740 Zea mays HOM05D005855 ORTHO05D006406 2.2e-54 217.6 501 34.7
Carub.0002s1120 Capsella rubella HOM05D005855 ORTHO05D006406 2.6e-52 210.7 501 33.5
Zm00001eb144810 Zea mays HOM05D005855 ORTHO05D006406 1.7e-51 208.0 499 33.5
A07p32840 Brassica napus HOM05D005855 ORTHO05D006406 1.4e-48 198.4 494 32.6
BraA07t30911Z Brassica rapa HOM05D005855 ORTHO05D006406 1.4e-48 198.4 494 32.6
C06p39070 Brassica napus HOM05D005855 ORTHO05D006406 6.7e-48 196.1 494 31.8
BolC6t38999H Brassica oleracea HOM05D005855 ORTHO05D006406 1.5e-47 194.9 494 31.8
unitig_749.g13497 Utricularia gibba HOM05D005855 ORTHO05D006406 7.4e-47 192.6 481 33.7
Oeu001220.3 Olea europaea HOM05D005855 ORTHO05D006406 4.1e-45 186.8 399 35.8
HPP92_024393 Vanilla planifolia HOM05D005855 ORTHO05D006406 4.5e-44 183.3 498 32.1
ATR0743G043 Amborella trichopoda HOM05D005855 ORTHO05D006406 1.9e-42 177.9 482 31.1
CDE04G3007 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 6.1e-41 172.9 452 33.2
Os07g0273301 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 6.1e-41 172.9 479 31.5
Zm00001eb304780 Zea mays HOM05D005855 ORTHO05D006406 8.0e-41 172.6 484 31.6
Actinidia31264 Actinidia chinensis HOM05D005855 ORTHO05D006406 4.4e-39 166.8 487 29.2
arahy.Tifrunner.gnm1.ann1.X0XBNQ Arachis hypogaea HOM05D005855 ORTHO05D006406 7.7e-36 156.0 217 42.9
SEGI_12971 Sequoiadendron giganteum HOM05D005855 ORTHO05D006406 1.5e-34 151.8 498 27.7
GSVIVG01007185001 Vitis vinifera HOM05D005855 ORTHO05D006406 4.7e-33 146.7 230 42.2
Cpa.g.sc88.1 Carica papaya HOM05D005855 ORTHO05D006406 4.4e-31 140.2 268 36.6
SMO356G0323 Selaginella moellendorffii HOM05D005855 ORTHO05D006406 2.4e-29 134.4 435 30.6
Pp3c3_24970 Physcomitrium patens HOM05D005855 ORTHO05D006406 5.5e-26 123.2 341 29.3
Dinv29076 Davidia involucrata HOM05D005855 ORTHO05D006406 4.7e-25 120.2 282 33.7
CDE02G2532 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 7.5e-23 112.8 285 32.6
Mapoly0189s0010 Marchantia polymorpha HOM05D005855 ORTHO05D006406 2.3e-19 101.3 412 23.5
CBR_g39948 Chara braunii HOM05D005855 ORTHO05D006406 6.1e-17 93.2 192 33.9
Zm00001eb310680 Zea mays HOM05D000012 ORTHO05D006406 5.9e-12 76.6 131 40.5
AagrBONN_evm.TU.Sc2ySwM_344.4907 Anthoceros agrestis HOM05D005855 ORTHO05D006406 1.0e-11 75.9 429 23.3
Zm00001eb381860 Zea mays HOM05D000012 ORTHO05D006406 8.9e-08 62.8 68 51.5
Cre12.g550152 Chlamydomonas reinhardtii HOM05D005855 ORTHO05D006406 1.3e-06 58.9 97 38.1


User provided reference genes

Program Settings