Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.F1VCW7 Arachis hypogaea HOM05D006423 ORTHO05D008233 2.0e-109 399.1 192 100.0
arahy.Tifrunner.gnm1.ann1.G8Z8HQ Arachis hypogaea HOM05D006423 ORTHO05D008233 7.6e-101 370.5 188 94.1
arahy.Tifrunner.gnm1.ann1.B7BMME Arachis hypogaea HOM05D006423 ORTHO05D008233 1.3e-100 369.8 188 94.1
arahy.Tifrunner.gnm1.ann1.K9W603 Arachis hypogaea HOM05D006423 ORTHO05D008233 4.9e-100 367.9 188 93.6
arahy.Tifrunner.gnm1.ann1.WK2353 Arachis hypogaea HOM05D006423 ORTHO05D008233 7.3e-96 354.0 188 91.5
arahy.Tifrunner.gnm1.ann1.5N158K Arachis hypogaea HOM05D006423 ORTHO05D008233 6.9e-78 294.3 169 85.2
LjContig00222g0011935 Lotus japonicus HOM05D006423 ORTHO05D008233 2.1e-74 282.7 188 73.4
Lalb_Chr05g0211301 Lupinus albus HOM05D006423 ORTHO05D008233 6.7e-73 277.7 178 77.0
Ca_24452_v3 Cicer arietinum L. HOM05D006423 ORTHO05D008233 2.1e-71 272.7 178 75.8
Glyma.09G222400 Glycine max HOM05D006423 ORTHO05D008233 2.1e-71 272.7 173 72.8
Medtr5g007970 Medicago truncatula HOM05D006423 ORTHO05D008233 1.4e-70 270.0 183 72.7
Psat0s769g0120 Pisum sativum HOM05D006423 ORTHO05D008233 4.0e-70 268.5 183 73.2
Prupe.1G561000 Prunus persica HOM05D006423 ORTHO05D008233 1.2e-69 266.9 176 73.9
MD04G1037900 Malus domestica HOM05D006423 ORTHO05D008233 2.0e-69 266.2 173 74.0
Eucgr.G00648 Eucalyptus grandis HOM05D006423 ORTHO05D008233 2.6e-69 265.8 188 68.6
ECA240G4319 Erigeron canadensis HOM05D006423 ORTHO05D008233 3.4e-69 265.4 186 68.8
RcHm_v2.0_Chr7g0225141 Rosa chinensis HOM05D006423 ORTHO05D008233 4.5e-69 265.0 173 73.4
Nitab4.5_0002429g0030 Nicotiana tabacum HOM05D003584 ORTHO05D008233 1.0e-68 263.8 188 68.1
VMungo1215G0185 Vigna mungo HOM05D006423 ORTHO05D008233 1.0e-68 263.8 178 74.2
FvH4_5g30480 Fragaria vesca HOM05D006423 ORTHO05D008233 1.7e-68 263.1 169 73.4
FAN08G0633 Fragaria x ananassa HOM05D006423 ORTHO05D008233 1.7e-68 263.1 169 73.4
FAN13G0653 Fragaria x ananassa HOM05D006423 ORTHO05D008233 1.7e-68 263.1 169 73.4
FAN18G4202 Fragaria x ananassa HOM05D006423 ORTHO05D008233 1.7e-68 263.1 169 73.4
TWI14G0718 Tripterygium wilfordii HOM05D006423 ORTHO05D008233 1.7e-68 263.1 183 68.9
Cfa005566 Carpinus fangiana HOM05D006423 ORTHO05D008233 6.5e-68 261.2 181 69.1
Rhsim11G0029000 Rhododendron simsii HOM05D006423 ORTHO05D008233 6.5e-68 261.2 187 67.4
Haze_10785 Corylus avellana HOM05D006423 ORTHO05D008233 8.4e-68 260.8 165 72.7
Lsat_1_v5_gn_6_73261 Lactuca sativa HOM05D006423 ORTHO05D008233 8.4e-68 260.8 180 68.9
Glyma.12G035900 Glycine max HOM05D006423 ORTHO05D008233 1.1e-67 260.4 177 71.2
HanXRQChr03g0082011 Helianthus annuus HOM05D006423 ORTHO05D008233 1.4e-67 260.0 187 67.9
Lj8A319T61 Lonicera japonica HOM05D006423 ORTHO05D008233 1.4e-67 260.0 186 67.2
CSS0010106 Camellia sinensis var. sinensis HOM05D006423 ORTHO05D008233 1.9e-67 259.6 182 67.6
Sabra19G0051500 Salix brachista HOM05D006423 ORTHO05D008233 1.9e-67 259.6 188 72.3
ClCG09G013540 Citrullus lanatus HOM05D006423 ORTHO05D008233 3.2e-67 258.8 163 74.2
Actinidia01333 Actinidia chinensis HOM05D006423 ORTHO05D008233 4.2e-67 258.5 182 68.1
DCAR_004588 Daucus carota HOM05D006423 ORTHO05D008233 4.2e-67 258.5 176 70.5
Nitab4.5_0001632g0060 Nicotiana tabacum HOM05D006423 ORTHO05D008233 4.2e-67 258.5 188 67.6
Phvul.002G038000 Phaseolus vulgaris HOM05D006423 ORTHO05D008233 4.2e-67 258.5 175 71.4
TAR623G1045 Trochodendron aralioides HOM05D006423 ORTHO05D008233 4.2e-67 258.5 175 70.3
CiPaw.05G040800 Carya illinoinensis HOM05D006423 ORTHO05D008233 5.5e-67 258.1 160 74.4
THA.LOC104798941 Tarenaya hassleriana HOM05D006423 ORTHO05D008233 5.5e-67 258.1 180 68.9
vmacro00241 Vaccinium macrocarpon HOM05D006423 ORTHO05D008233 7.1e-67 257.7 162 72.2
CsaV3_7G006110 Cucumis sativus L. HOM05D006423 ORTHO05D008233 9.3e-67 257.3 163 74.8
MBI10_g26061_MAGBIO Magnolia biondii HOM05D006423 ORTHO05D008233 1.2e-66 256.9 177 71.2
Potri.019G041300 Populus trichocarpa HOM05D006423 ORTHO05D008233 1.6e-66 256.5 188 72.3
MELO3C018682.2 Cucumis melo HOM05D006423 ORTHO05D008233 2.1e-66 256.1 163 74.2
CSS0049051 Camellia sinensis var. sinensis HOM05D006423 ORTHO05D008233 2.7e-66 255.8 162 72.2
Sc20g0000910 Simmondsia chinensis HOM05D006423 ORTHO05D008233 2.7e-66 255.8 185 66.5
Sed0023404 Sechium edule HOM05D006423 ORTHO05D008233 6.0e-66 254.6 159 74.8
Peaxi162Scf00185g01125 Petunia axillaris HOM05D006423 ORTHO05D008233 1.0e-65 253.8 187 66.8
Manes.14G151100 Manihot esculenta HOM05D006423 ORTHO05D008233 1.3e-65 253.4 176 70.5
Ciclev10001185m.g Citrus clementina HOM05D006423 ORTHO05D008233 1.8e-65 253.1 155 74.8
Dinv06913 Davidia involucrata HOM05D006423 ORTHO05D008233 1.8e-65 253.1 163 73.0
Gorai.005G259400 Gossypium raimondii HOM05D006423 ORTHO05D008233 1.8e-65 253.1 184 67.4
A06p28730 Brassica napus HOM05D006423 ORTHO05D008233 2.3e-65 252.7 182 66.5
C03p65030 Brassica napus HOM05D006423 ORTHO05D008233 2.3e-65 252.7 182 66.5
BolC3t18761H Brassica oleracea HOM05D006423 ORTHO05D008233 2.3e-65 252.7 182 66.5
BraA06t25814Z Brassica rapa HOM05D006423 ORTHO05D008233 2.3e-65 252.7 182 66.5
CAN.G474.25 Capsicum annuum HOM05D006423 ORTHO05D008233 2.3e-65 252.7 180 67.8
Sopen06g021720 Solanum pennellii HOM05D006423 ORTHO05D008233 2.3e-65 252.7 180 67.8
Aa31LG11G1500 Aethionema arabicum HOM05D006423 ORTHO05D008233 3.0e-65 252.3 178 67.4
Gohir.D02G231700 Gossypium hirsutum HOM05D006423 ORTHO05D008233 3.9e-65 251.9 184 66.8
PGR042G0678 Punica granatum HOM05D006423 ORTHO05D008233 5.1e-65 251.5 159 71.1
Sp2g25200 Schrenkiella parvula HOM05D006423 ORTHO05D008233 1.1e-64 250.4 182 67.0
Solyc06g066300.1 Solanum lycopersicum HOM05D006423 ORTHO05D008233 1.1e-64 250.4 180 66.7
AUR62004741 Chenopodium quinoa HOM05D006423 ORTHO05D008233 1.5e-64 250.0 174 68.4
PGSC0003DMG400016779 Solanum tuberosum HOM05D006423 ORTHO05D008233 1.5e-64 250.0 180 67.2
COL.COLO4_17915 Corchorus olitorius HOM05D006423 ORTHO05D008233 4.3e-64 248.4 184 65.8
Gohir.A03G210100 Gossypium hirsutum HOM05D006423 ORTHO05D008233 5.7e-64 248.1 182 67.0
PSO170G0343 Papaver somniferum HOM05D006423 ORTHO05D008233 5.7e-64 248.1 177 66.7
BcaB02g09615 Brassica carinata HOM05D006423 ORTHO05D008233 7.4e-64 247.7 157 73.2
Ah.04g162870 Amaranthus hybridus HOM05D006423 ORTHO05D008233 9.7e-64 247.3 157 72.0
AT5G62030 Arabidopsis thaliana HOM05D006423 ORTHO05D008233 9.7e-64 247.3 181 67.4
Thecc.02G043600 Theobroma cacao HOM05D006423 ORTHO05D008233 9.7e-64 247.3 182 65.9
Carub.0008s2271 Capsella rubella HOM05D006423 ORTHO05D008233 1.6e-63 246.5 160 72.5
QL02p073223 Quercus lobata HOM05D006423 ORTHO05D008233 1.6e-63 246.5 157 75.2
Nn2g14478 Nelumbo nucifera HOM05D006423 ORTHO05D008233 2.2e-63 246.1 176 67.0
CARHR275820 Cardamine hirsuta HOM05D006423 ORTHO05D008233 3.7e-63 245.4 162 71.6
PSO782G4910 Papaver somniferum HOM05D006423 ORTHO05D008233 3.7e-63 245.4 177 65.5
AL8G38790 Arabidopsis lyrata HOM05D006423 ORTHO05D008233 6.3e-63 244.6 181 66.3
Thhalv10004160m.g Eutrema salsugineum HOM05D006423 ORTHO05D008233 1.4e-62 243.4 185 64.9
SHI26338 Sapria himalayana HOM05D006423 ORTHO05D008233 1.4e-62 243.4 165 70.9
EL10Ac4g08897 Beta vulgaris HOM05D006423 ORTHO05D008233 1.8e-62 243.0 157 71.3
Cc08_g03820 Coffea canephora HOM05D006423 ORTHO05D008233 1.8e-62 243.0 176 67.6
Aqoxy4G02654 Aquilegia oxysepala HOM05D006423 ORTHO05D008233 4.1e-62 241.9 177 65.5
Duzib132G0113 Durio zibethinus HOM05D006423 ORTHO05D008233 5.3e-62 241.5 158 71.5
Atru.chr6.948 Acer truncatum HOM05D006423 ORTHO05D008233 1.2e-61 240.4 177 65.5
CDE05G2804 Ceratophyllum demersum HOM05D006423 ORTHO05D008233 6.5e-60 234.6 161 69.6
SGA_v2.0_scaffold96G29045 Striga asiatica HOM05D006423 ORTHO05D008233 7.2e-59 231.1 158 66.5
unitig_748.g8133 Utricularia gibba HOM05D006423 ORTHO05D008233 2.1e-58 229.6 170 63.5
HPP92_012832 Vanilla planifolia HOM05D006423 ORTHO05D008233 6.1e-58 228.0 155 68.4
AUR62037510 Chenopodium quinoa HOM05D006423 ORTHO05D008233 7.9e-58 227.6 163 66.9
MSTRG.11901 Avicennia marina HOM05D006423 ORTHO05D008233 1.0e-57 227.3 158 65.8
SalBow1G0435 Salvia bowleyana HOM05D006423 ORTHO05D008233 1.1e-56 223.8 174 60.3
SalBow1G8647 Salvia bowleyana HOM05D006423 ORTHO05D008233 1.1e-56 223.8 174 60.3
Zm00001eb258780 Zea mays HOM05D006423 ORTHO05D008233 9.7e-56 220.7 179 56.4
SEGI_34782 Sequoiadendron giganteum HOM05D006423 ORTHO05D008233 2.2e-55 219.5 154 61.7
Os02g0815600 Oryza sativa ssp. japonica HOM05D006423 ORTHO05D008233 2.8e-55 219.2 169 59.2
Migut.A00614 Erythranthe guttata HOM05D006423 ORTHO05D008233 4.8e-55 218.4 158 63.3
arahy.Tifrunner.gnm1.ann1.8H8UTP Arachis hypogaea HOM05D006423 ORTHO05D008233 1.8e-54 216.5 177 65.0
Mapoly0002s0072 Marchantia polymorpha HOM05D006423 ORTHO05D008233 2.6e-53 212.6 172 57.6
ATR0564G315 Amborella trichopoda HOM05D006423 ORTHO05D008233 5.9e-53 211.5 154 62.3
AagrBONN_evm.TU.Sc2ySwM_344.2159 Anthoceros agrestis HOM05D006423 ORTHO05D008233 1.1e-51 207.2 176 56.2
CBR_g39210 Chara braunii HOM05D006423 ORTHO05D008233 2.7e-50 202.6 176 53.4
SMO165G0082 Selaginella moellendorffii HOM05D006423 ORTHO05D008233 4.7e-50 201.8 152 58.6
TAR622G0998 Trochodendron aralioides HOM05D006423 ORTHO05D008233 1.7e-47 193.4 144 65.3
Pp3c15_23540 Physcomitrium patens HOM05D006423 ORTHO05D008233 7.0e-46 188.0 158 54.4
Cre09.g408500 Chlamydomonas reinhardtii HOM05D006423 ORTHO05D008233 2.2e-44 183.0 170 52.4
arahy.Tifrunner.gnm1.ann1.VBI12C Arachis hypogaea HOM05D006423 ORTHO05D008233 1.6e-42 176.8 93 88.2
arahy.Tifrunner.gnm1.ann1.Z7R28B Arachis hypogaea HOM05D006423 ORTHO05D008233 8.8e-41 171.0 93 83.9
PRCOL_00005581 Prasinoderma coloniale HOM05D006423 ORTHO05D008233 2.4e-38 162.9 152 53.9
FAN04G1985 Fragaria x ananassa HOM05D006423 ORTHO05D008233 1.1e-35 154.1 169 50.9
Atru.chr6.949 Acer truncatum HOM05D006423 ORTHO05D008233 1.9e-27 126.7 90 66.7
Haze_26324 Corylus avellana HOM05D006423 ORTHO05D008233 6.1e-26 121.7 143 44.8
GSVIVG01005261001 Vitis vinifera HOM05D006423 ORTHO05D008233 2.0e-24 116.7 152 43.4
arahy.Tifrunner.gnm1.ann1.QX3XL1 Arachis hypogaea HOM05D006423 ORTHO05D008233 1.7e-23 113.6 188 38.8
RcHm_v2.0_Chr7g0225101 Rosa chinensis HOM05D006423 ORTHO05D008233 5.9e-21 105.1 64 73.4
arahy.Tifrunner.gnm1.ann1.X0DKS7 Arachis hypogaea HOM05D006423 ORTHO05D008233 9.5e-19 97.8 185 35.1
Actinidia29280 Actinidia chinensis HOM05D006423 ORTHO05D008233 1.1e-14 84.3 67 58.2


User provided reference genes

Program Settings