Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.F0WSGW Arachis hypogaea HOM05D000021 ORTHO05D000010 2.0e-66 256.5 246 100.0
arahy.Tifrunner.gnm1.ann1.D0611N Arachis hypogaea HOM05D000021 ORTHO05D000010 6.2e-55 218.4 227 99.1
arahy.Tifrunner.gnm1.ann1.LHRI3Q Arachis hypogaea HOM05D000021 ORTHO05D000010 1.4e-54 217.2 226 98.7
arahy.Tifrunner.gnm1.ann1.34H731 Arachis hypogaea HOM05D000021 ORTHO05D000010 1.0e-49 201.1 217 83.9
arahy.Tifrunner.gnm1.ann1.F6YQC6 Arachis hypogaea HOM05D000021 ORTHO05D000010 8.3e-44 181.4 205 98.5
arahy.Tifrunner.gnm1.ann1.KVSU8U Arachis hypogaea HOM05D000021 ORTHO05D000010 1.7e-28 130.6 67 98.5
arahy.Tifrunner.gnm1.ann1.X4AMHZ Arachis hypogaea HOM05D000021 ORTHO05D000010 9.3e-27 124.8 66 93.9
Glyma.05G126400 Glycine max HOM05D000021 ORTHO05D000010 2.7e-26 123.2 233 62.7
Medtr8g465340 Medicago truncatula HOM05D000021 ORTHO05D000010 5.6e-16 89.0 237 68.8
Psat1g196120 Pisum sativum HOM05D000021 ORTHO05D000010 3.4e-13 79.7 65 63.1
Psat4g130240 Pisum sativum HOM05D000021 ORTHO05D000010 4.5e-13 79.3 64 62.5
Medtr8g470950 Medicago truncatula HOM05D000021 ORTHO05D000010 1.3e-12 77.8 64 64.1
Medtr8g469600 Medicago truncatula HOM05D000021 ORTHO05D000010 2.2e-12 77.0 64 64.1
Medtr8g470400 Medicago truncatula HOM05D000021 ORTHO05D000010 3.8e-12 76.3 64 64.1
Medtr8g469570 Medicago truncatula HOM05D000021 ORTHO05D000010 8.4e-12 75.1 65 61.5
Medtr8g469650 Medicago truncatula HOM05D000021 ORTHO05D000010 8.4e-12 75.1 65 61.5
Ca_00454_v3 Cicer arietinum L. HOM05D000021 ORTHO05D000010 1.1e-11 74.7 60 60.0
Medtr8g470560 Medicago truncatula HOM05D000021 ORTHO05D000010 2.4e-11 73.6 64 59.4
Medtr0070s0020 Medicago truncatula HOM05D000021 ORTHO05D000010 4.2e-11 72.8 64 62.5
Medtr8g469980 Medicago truncatula HOM05D000021 ORTHO05D000010 4.2e-11 72.8 61 62.3
Medtr8g470370 Medicago truncatula HOM05D000021 ORTHO05D000010 4.2e-11 72.8 64 59.4
TPR.G32236 Trifolium pratense HOM05D000021 ORTHO05D000010 4.2e-11 72.8 53 64.2
Medtr4g029710 Medicago truncatula HOM05D000021 ORTHO05D000010 9.3e-11 71.6 67 58.2
Medtr8g469780 Medicago truncatula HOM05D000021 ORTHO05D000010 1.2e-10 71.2 65 60.0
TPR.G40144 Trifolium pratense HOM05D000021 ORTHO05D000010 1.2e-10 71.2 64 54.7
arahy.Tifrunner.gnm1.ann1.M36Q6P Arachis hypogaea HOM05D000021 ORTHO05D000010 2.1e-10 70.5 63 60.3
arahy.Tifrunner.gnm1.ann1.VH2Q87 Arachis hypogaea HOM05D000021 ORTHO05D000010 2.7e-10 70.1 63 60.3
Psat4g130280 Pisum sativum HOM05D000021 ORTHO05D000010 4.6e-10 69.3 64 54.7
Psat4g133480 Pisum sativum HOM05D000021 ORTHO05D000010 1.0e-09 68.2 54 63.0
Medtr8g470050 Medicago truncatula HOM05D000021 ORTHO05D000010 1.8e-09 67.4 63 60.3
Medtr0830s0010 Medicago truncatula HOM05D000021 ORTHO05D000010 3.0e-09 66.6 61 59.0
Medtr8g469830 Medicago truncatula HOM05D000021 ORTHO05D000010 3.0e-09 66.6 64 53.1
Ca_00455_v3 Cicer arietinum L. HOM05D000021 ORTHO05D000010 5.1e-09 65.9 61 57.4
Dinv16795 Davidia involucrata HOM05D000021 ORTHO05D000010 8.7e-09 65.1 66 50.0
arahy.Tifrunner.gnm1.ann1.GYA3XJ Arachis hypogaea HOM05D000021 ORTHO05D000010 1.9e-08 63.9 48 62.5
TPR.G29564 Trifolium pratense HOM05D000021 ORTHO05D000010 3.3e-08 63.2 62 59.7
arahy.Tifrunner.gnm1.ann1.XV37PI Arachis hypogaea HOM05D000021 ORTHO05D000010 4.3e-08 62.8 62 51.6
Ciclev10010243m.g Citrus clementina HOM05D000021 ORTHO05D000010 4.3e-08 62.8 66 48.5
Ciclev10024901m.g Citrus clementina HOM05D000021 ORTHO05D000010 5.6e-08 62.4 210 64.8
TPR.G29494 Trifolium pratense HOM05D000021 ORTHO05D000010 5.6e-08 62.4 48 62.5
vmacro03921 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 5.6e-08 62.4 66 50.0
TPR.G30029 Trifolium pratense HOM05D000021 ORTHO05D000010 1.3e-07 61.2 66 56.1
Manes.17G057700 Manihot esculenta HOM05D000021 ORTHO05D000010 1.6e-07 60.8 66 51.5
Lj3g0004135 Lotus japonicus HOM05D002120 ORTHO05D002217 2.8e-07 60.1 71 43.7
Potri.016G029900 Populus trichocarpa HOM05D000021 ORTHO05D000010 2.8e-07 60.1 65 49.2
Prupe.2G044400 Prunus persica HOM05D000021 ORTHO05D000010 2.8e-07 60.1 66 51.5
Thecc.06G006800 Theobroma cacao HOM05D000021 ORTHO05D000010 3.7e-07 59.7 63 47.6
Ciclev10003919m.g Citrus clementina HOM05D000021 ORTHO05D000010 4.8e-07 59.3 68 48.5
RcHm_v2.0_Chr2g0115751 Rosa chinensis HOM05D000021 ORTHO05D018334 4.8e-07 59.3 50 62.0
QL04p024544 Quercus lobata HOM05D000021 ORTHO05D000010 6.2e-07 58.9 67 44.8
Gohir.A05G290100 Gossypium hirsutum HOM05D000021 ORTHO05D000010 8.1e-07 58.5 64 48.4
Medtr2g016530 Medicago truncatula HOM05D000021 ORTHO05D000010 8.1e-07 58.5 63 49.2
QL02p022177 Quercus lobata HOM05D000021 ORTHO05D000010 8.1e-07 58.5 66 47.0
Sabra16G0033700 Salix brachista HOM05D000021 ORTHO05D000010 8.1e-07 58.5 58 51.7
CAN.G538.9 Capsicum annuum HOM05D000021 ORTHO05D000010 1.1e-06 58.2 78 41.0
Ciclev10003773m.g Citrus clementina HOM05D000021 ORTHO05D000010 1.1e-06 58.2 59 50.8
Duzib106G1421 Durio zibethinus HOM05D000021 ORTHO05D000010 1.1e-06 58.2 63 50.8
QL05p050098 Quercus lobata HOM05D000021 ORTHO05D000010 1.4e-06 57.8 67 46.3
TPR.G11490 Trifolium pratense HOM05D000021 ORTHO05D000010 1.4e-06 57.8 62 51.6
Actinidia29435 Actinidia chinensis HOM05D000021 ORTHO05D000010 1.8e-06 57.4 67 47.8
Duzib106G0619 Durio zibethinus HOM05D000021 ORTHO05D000010 1.8e-06 57.4 60 51.7
RcHm_v2.0_Chr5g0059161 Rosa chinensis HOM05D000021 ORTHO05D000010 1.8e-06 57.4 215 65.1
Actinidia29429 Actinidia chinensis HOM05D000021 ORTHO05D000010 2.4e-06 57.0 67 47.8
Duzib106G1545 Durio zibethinus HOM05D000021 ORTHO05D000010 2.4e-06 57.0 60 50.0
Duzib205G0613 Durio zibethinus HOM05D000021 ORTHO05D000010 2.4e-06 57.0 67 46.3
Eucgr.G03393 Eucalyptus grandis HOM05D002120 ORTHO05D002217 2.4e-06 57.0 72 40.3
Hma1.2p1_0614F.1_g189570 Hydrangea macrophylla HOM05D000021 ORTHO05D000010 2.4e-06 57.0 67 46.3
Medtr2g016580 Medicago truncatula HOM05D000021 ORTHO05D000010 2.4e-06 57.0 36 66.7
Medtr3g449540 Medicago truncatula HOM05D000021 ORTHO05D000010 2.4e-06 57.0 37 67.6
Thecc.03G147100 Theobroma cacao HOM05D000021 ORTHO05D000010 2.4e-06 57.0 61 49.2
Ciclev10018259m.g Citrus clementina HOM05D000021 ORTHO05D000010 3.1e-06 56.6 57 49.1
Gohir.A10G037501 Gossypium hirsutum HOM05D000021 ORTHO05D000010 3.1e-06 56.6 67 43.3
Gorai.009G306900 Gossypium raimondii HOM05D000021 ORTHO05D000010 3.1e-06 56.6 60 51.7
Prupe.6G160800 Prunus persica HOM05D000021 ORTHO05D000010 3.1e-06 56.6 63 50.8
Hund20846 Selenicereus undatus HOM05D000021 ORTHO05D000010 3.1e-06 56.6 67 46.3
Haze_19487 Corylus avellana HOM05D000021 ORTHO05D000127 4.0e-06 56.2 67 47.8
Duzib106G0488 Durio zibethinus HOM05D000021 ORTHO05D000010 4.0e-06 56.2 60 51.7
Duzib106G1694 Durio zibethinus HOM05D000021 ORTHO05D000010 4.0e-06 56.2 60 51.7
Ah.06g193580 Amaranthus hybridus HOM05D002120 ORTHO05D002217 5.3e-06 55.8 72 41.7
Ciclev10014011m.g Citrus clementina HOM05D000021 ORTHO05D000010 5.3e-06 55.8 67 46.3
Duzib106G0658 Durio zibethinus HOM05D000021 ORTHO05D000010 5.3e-06 55.8 60 51.7
Medtr6g040210 Medicago truncatula HOM05D000021 ORTHO05D000010 5.3e-06 55.8 60 50.0
TPR.G29559 Trifolium pratense HOM05D000021 ORTHO05D000010 5.3e-06 55.8 37 70.3
GSVIVG01016080001 Vitis vinifera HOM05D000021 ORTHO05D000010 5.3e-06 55.8 65 43.1
Haze_13576 Corylus avellana HOM05D000021 ORTHO05D000010 6.9e-06 55.5 67 49.3
Haze_19484 Corylus avellana HOM05D000021 ORTHO05D000010 6.9e-06 55.5 67 47.8
Duzib106G1955 Durio zibethinus HOM05D000021 ORTHO05D000010 6.9e-06 55.5 59 50.8
Duzib106G2045 Durio zibethinus HOM05D000021 ORTHO05D000010 6.9e-06 55.5 58 50.0
Duzib205G1748 Durio zibethinus HOM05D000021 ORTHO05D000010 6.9e-06 55.5 68 45.6
Gorai.009G307100 Gossypium raimondii HOM05D000021 ORTHO05D000010 6.9e-06 55.5 56 51.8
Hma1.2p1_2438F.1_g322160 Hydrangea macrophylla HOM05D000021 ORTHO05D000010 6.9e-06 55.5 67 44.8
LjContig00081g0016558 Lotus japonicus HOM05D002120 ORTHO05D002217 6.9e-06 55.5 71 40.8
TWI09G1583 Tripterygium wilfordii HOM05D000021 ORTHO05D000010 6.9e-06 55.5 68 44.1
Duzib105G0001 Durio zibethinus HOM05D000021 ORTHO05D000010 9.0e-06 55.1 60 50.0
Psat1g196040 Pisum sativum HOM05D000021 ORTHO05D000010 9.0e-06 55.1 63 47.6
Potri.003G150100 Populus trichocarpa HOM05D000021 ORTHO05D000010 9.0e-06 55.1 69 49.3
RcHm_v2.0_Chr7g0213301 Rosa chinensis HOM05D000021 ORTHO05D000010 9.0e-06 55.1 68 44.1
Thecc.07G128900 Theobroma cacao HOM05D000021 ORTHO05D000010 9.0e-06 55.1 67 47.8


User provided reference genes

Program Settings