Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2537.3 1274 100.0
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 2317.3 1268 91.3
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 2301.6 1268 90.0
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 2299.6 1268 90.9
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2295.0 1268 90.8
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 2293.1 1268 90.6
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 2292.7 1268 90.2
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 2246.9 1268 89.1
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 2237.2 1268 88.7
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 2175.2 1271 83.9
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 2172.9 1269 84.2
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 2168.3 1269 83.6
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 2165.6 1272 83.7
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 2165.6 1269 84.0
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 2164.8 1272 83.8
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 2159.0 1264 83.9
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 2152.5 1273 83.3
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2147.1 1272 83.6
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 2147.1 1272 82.4
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 2142.9 1272 82.9
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2141.7 1273 83.7
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 2139.4 1269 83.4
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2138.6 1269 83.5
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 2137.5 1269 83.7
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 2137.1 1270 82.7
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 2137.1 1265 83.4
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 2135.1 1269 83.4
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2134.8 1269 83.5
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 2134.8 1267 83.1
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 2134.4 1269 82.7
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2132.5 1272 82.6
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2131.7 1272 83.3
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 2129.4 1269 82.5
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 2128.6 1270 82.2
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2128.2 1272 82.5
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 2125.5 1270 83.0
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2125.1 1270 82.9
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2124.0 1272 82.6
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2122.8 1270 82.8
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 2122.4 1272 82.6
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 2120.9 1269 82.3
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 2120.1 1272 82.6
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 2119.7 1270 82.1
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 2118.6 1272 81.3
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 2117.8 1269 82.2
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 2117.0 1270 82.4
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 2117.0 1269 82.7
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2117.0 1272 82.5
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2116.7 1269 82.9
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 2115.9 1267 82.3
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 2114.7 1278 82.3
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 2114.3 1272 82.0
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2113.2 1272 82.2
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 2112.8 1269 81.5
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 2110.5 1269 81.9
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 2109.0 1268 81.9
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2108.6 1270 82.1
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 2107.8 1268 81.6
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2105.9 1270 82.2
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 2105.5 1272 80.8
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2103.6 1264 82.4
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 2099.7 1268 81.5
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 2097.0 1272 80.5
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 2096.2 1272 80.7
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2096.2 1277 80.1
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 2096.2 1273 80.4
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2095.5 1271 81.5
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 2093.5 1269 81.8
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 2092.8 1273 80.3
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 2092.4 1268 81.2
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2091.6 1277 80.0
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 2090.5 1268 81.0
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2087.8 1271 81.2
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 2087.0 1269 80.5
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 2086.2 1272 80.0
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2081.2 1272 81.4
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 2076.6 1267 80.3
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2073.1 1241 82.7
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 2073.1 1276 79.5
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 2067.7 1270 80.6
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 2067.0 1251 81.2
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 2062.0 1268 79.8
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 2059.6 1249 81.3
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 2059.6 1272 80.2
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 2049.6 1262 80.0
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 2041.5 1210 83.1
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 2036.5 1267 79.8
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2035.0 1272 78.7
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 2034.2 1267 78.8
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 2023.4 1269 78.9
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2018.4 1271 79.2
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 1987.6 1269 77.8
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 1971.8 1271 77.3
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1948.7 1087 90.0
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1909.4 1264 73.4
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1899.8 1163 81.3
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 1895.9 1268 74.5
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1888.6 1272 74.8
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1832.8 1281 71.6
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1826.6 1192 77.2
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1812.0 1250 72.3
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 1804.3 1274 70.5
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1783.1 1072 80.6
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1765.7 962 90.1
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 1753.4 1128 78.4
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1738.4 1269 70.6
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1712.6 1270 69.7
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1543.9 1322 60.7
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 1521.1 1047 72.1
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 0.0e+00 1347.8 1264 59.2
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 0.0e+00 1335.1 813 80.9
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1313.9 1334 53.1
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 0.0e+00 1289.6 1388 51.7
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1267.3 1032 67.9
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 0.0e+00 1194.5 725 80.8
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1081.2 813 69.1
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 9.7e-261 904.4 1241 41.6
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 1.2e-255 887.5 570 77.0
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.8e-251 873.6 504 85.9
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 4.7e-223 779.2 650 61.2
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 5.2e-214 749.2 525 72.2
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 4.9e-188 662.9 455 74.7
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 2.9e-180 637.1 391 82.9
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 3.8e-124 450.7 359 63.8
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 1.6e-114 418.7 271 81.5
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 1.5e-112 412.1 312 69.2
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 3.7e-79 301.2 482 42.3
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 6.0e-69 267.3 172 77.3
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 4.3e-67 261.2 172 76.2
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.6e-66 259.2 172 75.6
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 8.4e-63 246.9 138 89.9
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 1.4e-57 229.6 234 54.7
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 2.1e-50 205.7 117 82.1
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 2.6e-40 172.2 145 64.8
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 8.4e-39 167.2 91 85.7
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 6.0e-37 161.0 182 52.7
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 6.9e-33 147.5 101 65.3
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.4e-25 123.2 104 60.6


User provided reference genes

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