Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 2.6e-167 592.0 307 100.0
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 1.4e-149 533.1 285 97.9
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 1.2e-119 433.7 312 75.3
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 9.8e-119 430.6 309 74.8
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 9.2e-117 424.1 305 74.8
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 4.6e-116 421.8 305 74.1
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 3.9e-115 418.7 310 72.6
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 2.1e-113 412.9 308 73.1
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 3.6e-113 412.1 308 73.1
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 7.6e-103 377.9 307 66.1
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 1.1e-101 374.0 305 66.6
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 1.9e-101 373.2 306 66.7
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 3.2e-101 372.5 250 72.4
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 4.2e-101 372.1 299 66.9
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 1.6e-100 370.2 244 76.2
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 1.6e-100 370.2 306 65.0
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 2.1e-100 369.8 257 72.4
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 6.0e-100 368.2 254 72.8
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 6.6e-99 364.8 307 63.5
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 1.1e-98 364.0 254 72.0
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 1.5e-98 363.6 255 70.6
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 5.6e-98 361.7 251 73.7
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 7.3e-98 361.3 280 66.8
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 9.6e-98 360.9 256 71.9
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 1.3e-97 360.5 262 70.2
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 2.1e-97 359.8 253 72.3
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 2.4e-96 356.3 301 64.5
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 3.1e-96 355.9 262 67.9
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 3.1e-96 355.9 297 63.6
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 3.1e-96 355.9 263 70.0
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 6.9e-96 354.8 271 68.6
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 6.9e-96 354.8 302 62.6
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 1.2e-95 354.0 272 65.4
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 1.2e-95 354.0 254 72.0
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 2.6e-95 352.8 243 71.2
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 5.8e-95 351.7 244 70.1
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 9.9e-95 350.9 287 62.7
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.7e-94 350.1 284 65.1
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 2.2e-94 349.7 307 62.5
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 3.8e-94 349.0 243 70.0
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 6.4e-94 348.2 251 68.5
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 8.4e-94 347.8 258 70.5
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 1.4e-93 347.1 254 69.3
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 3.2e-93 345.9 309 61.5
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 4.2e-93 345.5 256 67.6
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 5.4e-93 345.1 252 70.6
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 7.1e-93 344.7 310 62.3
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 7.1e-93 344.7 250 69.2
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 1.2e-92 344.0 251 69.7
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.6e-92 343.6 310 62.3
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 1.6e-92 343.6 284 65.1
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 2.7e-92 342.8 252 69.4
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 2.7e-92 342.8 280 66.4
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 3.5e-92 342.4 252 69.4
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 3.5e-92 342.4 251 69.7
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 6.0e-92 341.7 277 66.8
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 6.0e-92 341.7 259 69.9
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 6.0e-92 341.7 258 68.2
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 6.0e-92 341.7 258 68.2
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 7.9e-92 341.3 252 69.4
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 1.3e-91 340.5 305 60.3
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 2.3e-91 339.7 277 69.0
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 3.9e-91 339.0 256 68.4
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 1.1e-90 337.4 288 63.9
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 7.4e-90 334.7 268 66.0
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.6e-89 333.6 258 67.4
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 2.8e-89 332.8 249 68.3
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 2.8e-89 332.8 270 62.6
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 2.8e-89 332.8 265 71.3
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 3.6e-89 332.4 271 63.8
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 3.6e-89 332.4 244 69.7
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 1.4e-88 330.5 241 68.9
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 1.8e-88 330.1 301 61.8
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 2.4e-88 329.7 293 62.1
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 1.5e-87 327.0 283 63.3
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 2.0e-87 326.6 258 67.1
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 4.5e-87 325.5 248 68.1
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 5.5e-85 318.5 256 63.7
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 1.6e-84 317.0 240 68.8
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 2.7e-84 316.2 249 67.5
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 3.5e-84 315.8 227 71.4
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 7.9e-84 314.7 241 68.9
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 2.3e-83 313.2 262 63.4
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 5.1e-83 312.0 238 68.1
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 6.7e-83 311.6 237 67.1
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 2.4e-80 303.1 229 69.4
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 4.0e-80 302.4 271 59.8
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 2.0e-79 300.1 257 61.9
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 4.9e-78 295.4 261 60.9
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 3.2e-77 292.7 235 64.7
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 4.6e-76 288.9 192 76.6
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 6.7e-75 285.0 267 58.1
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 5.7e-74 282.0 261 59.0
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 9.6e-74 281.2 242 60.7
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 1.2e-68 264.2 187 72.7
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 2.1e-68 263.5 304 52.3
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 3.6e-60 236.1 232 52.2
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 5.3e-56 222.2 307 46.9
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 9.1e-56 221.5 233 50.6
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 3.0e-51 206.5 227 46.7
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 1.8e-48 197.2 133 72.2
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 1.7e-38 164.1 239 41.0
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 1.9e-37 160.6 274 36.9
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 2.3e-35 153.7 208 43.3
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 4.1e-32 142.9 91 73.6
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 9.1e-32 141.7 282 34.4
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 1.3e-30 137.9 259 37.8
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 2.8e-25 120.2 88 64.8
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 5.2e-19 99.4 135 45.2
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 1.8e-16 90.9 48 85.4
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 8.6e-14 82.0 61 63.9
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 9.5e-13 78.6 104 49.0
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 1.6e-12 77.8 54 61.1
SEGI_22360 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 7.5e-10 68.9 87 47.1
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 8.3e-09 65.5 60 56.7
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 8.3e-09 65.5 60 56.7
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 2.4e-08 63.9 60 55.0
CDE06G0154 Ceratophyllum demersum HOM05D006923 ORTHO05D130285 2.3e-06 57.4 40 72.5


User provided reference genes

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