Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.EU8XRE Arachis hypogaea HOM05D002924 ORTHO05D003122 1.0e-46 189.9 110 100.0
arahy.Tifrunner.gnm1.ann1.IG3UT7 Arachis hypogaea HOM05D002924 ORTHO05D003122 2.0e-37 159.1 147 73.5
Glyma.08G096500 Glycine max HOM05D002924 ORTHO05D003122 2.2e-20 102.4 147 46.9
Glyma.05G141200 Glycine max HOM05D002924 ORTHO05D003122 1.9e-19 99.4 146 47.3
Psat7g082920 Pisum sativum HOM05D002924 ORTHO05D003122 2.4e-19 99.0 134 50.0
Glyma.13G219100 Glycine max HOM05D002924 ORTHO05D003122 9.2e-19 97.1 151 46.4
Lj6g0009882 Lotus japonicus HOM05D002924 ORTHO05D003122 1.3e-17 93.2 147 44.2
Glyma.15G093100 Glycine max HOM05D002924 ORTHO05D003122 1.5e-16 89.7 146 44.5
Duzib235G1474 Durio zibethinus HOM05D002924 ORTHO05D003122 2.5e-16 89.0 135 44.4
VMungo0540G0736 Vigna mungo HOM05D002924 ORTHO05D003122 3.3e-16 88.6 146 43.8
Psat1g189800 Pisum sativum HOM05D002924 ORTHO05D003122 6.2e-15 84.3 140 42.1
CiPaw.10G090800 Carya illinoinensis HOM05D002924 ORTHO05D003122 1.1e-14 83.6 150 44.0
Lalb_Chr15g0086781 Lupinus albus HOM05D002924 ORTHO05D003122 1.4e-14 83.2 152 40.8
Gohir.A09G077300 Gossypium hirsutum HOM05D002924 ORTHO05D003122 4.0e-14 81.6 135 43.7
MD10G1260700 Malus domestica HOM05D002924 ORTHO05D003122 4.0e-14 81.6 126 41.3
Duzib160G0328 Durio zibethinus HOM05D002924 ORTHO05D003122 5.2e-14 81.3 138 42.8
Thecc.06G148600 Theobroma cacao HOM05D002924 ORTHO05D003122 5.2e-14 81.3 134 42.5
Lalb_Chr18g0055361 Lupinus albus HOM05D002924 ORTHO05D003122 1.2e-13 80.1 146 39.7
Lj4g0026158 Lotus japonicus HOM05D002924 ORTHO05D003122 2.0e-13 79.3 144 44.4
Gohir.D05G150200 Gossypium hirsutum HOM05D002924 ORTHO05D003122 4.4e-13 78.2 134 41.0
TPR.G36164 Trifolium pratense HOM05D002924 ORTHO05D003122 4.4e-13 78.2 145 39.3
Gorai.009G154300 Gossypium raimondii HOM05D002924 ORTHO05D003122 5.8e-13 77.8 134 41.8
Gohir.D09G077300 Gossypium hirsutum HOM05D002924 ORTHO05D003122 7.6e-13 77.4 135 42.2
Gorai.006G092400 Gossypium raimondii HOM05D002924 ORTHO05D003122 7.6e-13 77.4 135 42.2
Gohir.A05G147700 Gossypium hirsutum HOM05D002924 ORTHO05D003122 9.9e-13 77.0 134 41.0
Phvul.006G165800 Phaseolus vulgaris HOM05D002924 ORTHO05D003122 9.9e-13 77.0 144 41.7
Cc00_g01970 Coffea canephora HOM05D002924 ORTHO05D003122 3.8e-12 75.1 132 43.2
Gohir.A10G041900 Gossypium hirsutum HOM05D002924 ORTHO05D003122 4.9e-12 74.7 132 42.4
Gohir.D10G042800 Gossypium hirsutum HOM05D002924 ORTHO05D003122 4.9e-12 74.7 132 42.4
QL05p059253 Quercus lobata HOM05D002924 ORTHO05D003122 8.4e-12 73.9 143 41.3
Gorai.011G045300 Gossypium raimondii HOM05D002924 ORTHO05D003122 1.4e-11 73.2 132 41.7
Medtr2g019190 Medicago truncatula HOM05D002924 ORTHO05D003122 1.9e-11 72.8 147 42.2
Psat1g194920 Pisum sativum HOM05D002924 ORTHO05D003122 1.9e-11 72.8 79 55.7
COL.COLO4_31051 Corchorus olitorius HOM05D002924 ORTHO05D003122 2.4e-11 72.4 137 39.4
Psat1g195000 Pisum sativum HOM05D002924 ORTHO05D003122 2.4e-11 72.4 79 55.7
arahy.Tifrunner.gnm1.ann1.A76KD4 Arachis hypogaea HOM05D002924 ORTHO05D003122 3.2e-11 72.0 132 47.7
Cfa000931 Carpinus fangiana HOM05D007511 ORTHO05D003753 3.2e-11 72.0 99 49.5
QL05p057398 Quercus lobata HOM05D002924 ORTHO05D003122 4.2e-11 71.6 143 39.9
MD05G1282100 Malus domestica HOM05D002924 ORTHO05D003122 5.4e-11 71.2 129 41.1
vmacro03333 Vaccinium macrocarpon HOM05D002924 ORTHO05D003122 1.2e-10 70.1 136 41.9
arahy.Tifrunner.gnm1.ann1.P4WXL8 Arachis hypogaea HOM05D002924 ORTHO05D003122 1.6e-10 69.7 132 48.5
CiPaw.09G122300 Carya illinoinensis HOM05D002924 ORTHO05D003122 1.6e-10 69.7 148 37.8
Nitab4.5_0005246g0010 Nicotiana tabacum HOM05D002924 ORTHO05D003122 1.6e-10 69.7 146 38.4
Prupe.4G082500 Prunus persica HOM05D002924 ORTHO05D003122 2.1e-10 69.3 137 38.0
Sed0007473 Sechium edule HOM05D002924 ORTHO05D003122 2.1e-10 69.3 137 42.3
CANSAT35G0631 Cannabis sativa HOM05D002924 ORTHO05D003122 4.6e-10 68.2 166 33.7
Dinv32237 Davidia involucrata HOM05D002924 ORTHO05D003122 7.8e-10 67.4 143 40.6
Actinidia07706 Actinidia chinensis HOM05D002924 ORTHO05D003122 1.3e-09 66.6 137 39.4
FAN21G1101 Fragaria x ananassa HOM05D002924 ORTHO05D003122 1.3e-09 66.6 147 40.1
FAN25G1226 Fragaria x ananassa HOM05D002924 ORTHO05D003122 1.3e-09 66.6 147 38.8
PSO675G3356 Papaver somniferum HOM05D002924 ORTHO05D003122 1.3e-09 66.6 134 36.6
FAN16G0603 Fragaria x ananassa HOM05D002924 ORTHO05D003122 1.7e-09 66.2 147 39.5
FvH4_3g05370 Fragaria vesca HOM05D002924 ORTHO05D003122 3.9e-09 65.1 146 39.7
FAN11G1040 Fragaria x ananassa HOM05D002924 ORTHO05D003122 5.1e-09 64.7 147 39.5
Peaxi162Scf00394g00120 Petunia axillaris HOM05D002924 ORTHO05D003122 5.1e-09 64.7 140 38.6
Nn4g26591 Nelumbo nucifera HOM05D002924 ORTHO05D003122 6.6e-09 64.3 150 38.7
GSVIVG01021514001 Vitis vinifera HOM05D002924 ORTHO05D003122 6.6e-09 64.3 143 36.4
Nitab4.5_0001531g0020 Nicotiana tabacum HOM05D002924 ORTHO05D003122 8.7e-09 63.9 141 36.9
Medtr8g107300 Medicago truncatula HOM05D002924 ORTHO05D003122 1.1e-08 63.5 142 40.8
Manes.15G122900 Manihot esculenta HOM05D002924 ORTHO05D003122 1.9e-08 62.8 143 39.2
Rhsim13G0114700 Rhododendron simsii HOM05D002924 ORTHO05D003122 1.9e-08 62.8 136 39.0
TWI53G0343 Tripterygium wilfordii HOM05D002924 ORTHO05D003122 1.9e-08 62.8 140 37.9
Actinidia39583 Actinidia chinensis HOM05D002924 ORTHO05D003122 2.5e-08 62.4 143 37.1
Lsat_1_v5_gn_7_28101 Lactuca sativa HOM05D002924 ORTHO05D003122 2.5e-08 62.4 143 38.5
Nitab4.5_0001531g0050 Nicotiana tabacum HOM05D002924 ORTHO05D003122 3.3e-08 62.0 78 44.9
TPR.G20537 Trifolium pratense HOM05D002924 ORTHO05D003122 3.3e-08 62.0 60 55.0
ClCG03G006750 Citrullus lanatus HOM05D002924 ORTHO05D003122 4.3e-08 61.6 153 35.3
MD05G1282000 Malus domestica HOM05D002924 ORTHO05D003122 5.6e-08 61.2 132 38.6
Sed0008794 Sechium edule HOM05D002924 ORTHO05D003122 5.6e-08 61.2 146 37.7
Sabra11G0066500 Salix brachista HOM05D002924 ORTHO05D003122 7.3e-08 60.8 143 35.7
CSS0028188 Camellia sinensis var. sinensis HOM05D002924 ORTHO05D003122 9.6e-08 60.5 150 36.7
Sed0024828 Sechium edule HOM05D002924 ORTHO05D003122 9.6e-08 60.5 137 40.9
ECA236G5022 Erigeron canadensis HOM05D002924 ORTHO05D003122 1.3e-07 60.1 150 37.3
GSVIVG01007188001 Vitis vinifera HOM05D002924 ORTHO05D003122 1.3e-07 60.1 79 46.8
Atru.chr10.1192 Acer truncatum HOM05D002924 ORTHO05D003122 1.6e-07 59.7 141 36.9
Actinidia18522 Actinidia chinensis HOM05D002924 ORTHO05D003122 1.6e-07 59.7 146 34.9
TWI09G0754 Tripterygium wilfordii HOM05D002924 ORTHO05D003122 1.6e-07 59.7 131 39.7
MSTRG.16253 Avicennia marina HOM05D002924 ORTHO05D003122 2.1e-07 59.3 140 37.9
Peaxi162Scf00317g00121 Petunia axillaris HOM05D002924 ORTHO05D003122 2.1e-07 59.3 139 33.8
GSVIVG01021516001 Vitis vinifera HOM05D002924 ORTHO05D003122 2.1e-07 59.3 79 49.4
PGSC0003DMG400008782 Solanum tuberosum HOM05D002924 ORTHO05D003122 2.8e-07 58.9 146 35.6
Dinv05213 Davidia involucrata HOM05D002924 ORTHO05D003122 3.6e-07 58.5 145 37.2
Aqoxy1G01686 Aquilegia oxysepala HOM05D002924 ORTHO05D003122 4.8e-07 58.2 135 39.3
Nitab4.5_0009991g0010 Nicotiana tabacum HOM05D002924 ORTHO05D003122 4.8e-07 58.2 145 34.5
Oeu031277.1 Olea europaea HOM05D002924 ORTHO05D003122 6.2e-07 57.8 144 38.9
Sed0009253 Sechium edule HOM05D002924 ORTHO05D003122 8.1e-07 57.4 142 36.6
GSVIVG01021519001 Vitis vinifera HOM05D002924 ORTHO05D003122 1.1e-06 57.0 135 36.3
Peaxi162Scf00317g00117 Petunia axillaris HOM05D002924 ORTHO05D003122 1.4e-06 56.6 146 33.6
Solyc08g036620.4 Solanum lycopersicum HOM05D002924 ORTHO05D003122 1.4e-06 56.6 129 35.7
PGSC0003DMG400001174 Solanum tuberosum HOM05D002924 ORTHO05D003122 1.4e-06 56.6 133 39.1
HanXRQChr15g0482111 Helianthus annuus HOM05D002924 ORTHO05D003122 2.4e-06 55.8 142 37.3
BcaC01g00164 Brassica carinata HOM05D002924 ORTHO05D003122 3.1e-06 55.5 141 33.3
DCAR_007884 Daucus carota HOM05D002924 ORTHO05D003122 3.1e-06 55.5 146 33.6
Nitab4.5_0001531g0040 Nicotiana tabacum HOM05D002924 ORTHO05D003122 4.0e-06 55.1 83 43.4
Potri.011G083900 Populus trichocarpa HOM05D002924 ORTHO05D003122 4.0e-06 55.1 142 35.2
PGR083G2757 Punica granatum HOM05D002924 ORTHO05D003122 4.0e-06 55.1 77 44.2
CAN.G50.1 Capsicum annuum HOM05D002924 ORTHO05D003122 9.0e-06 53.9 135 36.3
RcHm_v2.0_Chr5g0014381 Rosa chinensis HOM05D002924 ORTHO05D003122 9.0e-06 53.9 152 36.2
Solyc08g036660.4 Solanum lycopersicum HOM05D002924 ORTHO05D003122 9.0e-06 53.9 149 35.6
Sopen08g011370 Solanum pennellii HOM05D002924 ORTHO05D003122 9.0e-06 53.9 129 35.7
PGSC0003DMG400008781 Solanum tuberosum HOM05D002924 ORTHO05D003122 9.0e-06 53.9 117 36.8


User provided reference genes

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