Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.ERVJ4V Arachis hypogaea HOM05D006876 ORTHO05D008708 1.3e-76 289.7 143 100.0
arahy.Tifrunner.gnm1.ann1.R6YTNA Arachis hypogaea HOM05D006876 ORTHO05D008708 2.3e-54 215.7 177 66.7
arahy.Tifrunner.gnm1.ann1.S4H51W Arachis hypogaea HOM05D006876 ORTHO05D008708 5.2e-38 161.4 89 92.1
MD12G1111100 Malus domestica HOM05D006876 ORTHO05D008708 3.7e-28 128.6 180 38.9
Prupe.7G023500 Prunus persica HOM05D006876 ORTHO05D008708 1.4e-27 126.7 190 36.3
MELO3C019167.2 Cucumis melo HOM05D006876 ORTHO05D008708 1.8e-27 126.3 177 39.0
CiPaw.09G161500 Carya illinoinensis HOM05D006876 ORTHO05D008708 7.0e-27 124.4 178 38.8
CANSAT78G2074 Cannabis sativa HOM05D006876 ORTHO05D008708 9.2e-27 124.0 179 37.4
FAN19G1913 Fragaria x ananassa HOM05D006876 ORTHO05D008708 2.0e-26 122.9 181 39.8
CsaV3_4G029000 Cucumis sativus L. HOM05D006876 ORTHO05D008708 2.7e-26 122.5 177 38.4
Lj1g0024709 Lotus japonicus HOM05D006876 ORTHO05D008708 3.5e-26 122.1 179 40.8
Lalb_Chr24g0400801 Lupinus albus HOM05D006876 ORTHO05D008708 4.6e-26 121.7 178 40.4
arahy.Tifrunner.gnm1.ann1.SXUX32 Arachis hypogaea HOM05D006876 ORTHO05D008708 6.0e-26 121.3 181 39.8
RcHm_v2.0_Chr7g0183121 Rosa chinensis HOM05D006876 ORTHO05D008708 6.0e-26 121.3 182 37.9
arahy.Tifrunner.gnm1.ann1.U8TZLL Arachis hypogaea HOM05D006876 ORTHO05D008708 1.0e-25 120.6 181 39.8
ClCG04G005040 Citrullus lanatus HOM05D006876 ORTHO05D008708 1.0e-25 120.6 181 38.1
Sed0006068 Sechium edule HOM05D006876 ORTHO05D008708 2.3e-25 119.4 181 36.5
Gohir.D13G092600 Gossypium hirsutum HOM05D006876 ORTHO05D008708 5.0e-25 118.2 175 37.1
FAN28G2491 Fragaria x ananassa HOM05D006876 ORTHO05D008708 6.6e-25 117.9 191 36.6
QL07p015416 Quercus lobata HOM05D006876 ORTHO05D008708 8.6e-25 117.5 186 37.1
PGR142G2444 Punica granatum HOM05D006876 ORTHO05D008708 1.1e-24 117.1 184 37.5
Cfa019902 Carpinus fangiana HOM05D006876 ORTHO05D008708 1.9e-24 116.3 179 35.2
Manes.09G001600 Manihot esculenta HOM05D006876 ORTHO05D008708 1.9e-24 116.3 181 35.4
Cpa.g.sc33.174 Carica papaya HOM05D006876 ORTHO05D008708 3.3e-24 115.5 184 36.4
Gohir.A13G086570 Gossypium hirsutum HOM05D006876 ORTHO05D008708 3.3e-24 115.5 175 36.6
Hma1.2p1_0694F.1_g204340 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 4.3e-24 115.2 196 34.2
Medtr7g088040 Medicago truncatula HOM05D006876 ORTHO05D008708 4.3e-24 115.2 174 38.5
Dinv13650 Davidia involucrata HOM05D006876 ORTHO05D008708 5.6e-24 114.8 177 37.3
RhsimUnG0021300 Rhododendron simsii HOM05D006876 ORTHO05D008708 7.3e-24 114.4 184 35.3
CARHR166970 Cardamine hirsuta HOM05D006876 ORTHO05D008708 9.5e-24 114.0 186 36.0
Phvul.001G101300 Phaseolus vulgaris HOM05D006876 ORTHO05D008708 9.5e-24 114.0 173 38.7
A09p49640 Brassica napus HOM05D006876 ORTHO05D008708 1.6e-23 113.2 188 35.6
BraA09t40417Z Brassica rapa HOM05D006876 ORTHO05D008708 1.6e-23 113.2 188 35.6
Ciclev10012641m.g Citrus clementina HOM05D006876 ORTHO05D008708 2.1e-23 112.8 184 35.9
Thhalv10006232m.g Eutrema salsugineum HOM05D006876 ORTHO05D008708 2.1e-23 112.8 186 37.1
Sopen10g028620 Solanum pennellii HOM05D006876 ORTHO05D008708 6.2e-23 111.3 177 36.2
Glyma.03G003700 Glycine max HOM05D006876 ORTHO05D008708 8.0e-23 110.9 175 38.9
Potri.006G026300 Populus trichocarpa HOM05D006876 ORTHO05D008708 8.0e-23 110.9 177 37.9
Peaxi162Scf00003g05358 Petunia axillaris HOM05D006876 ORTHO05D008708 1.1e-22 110.5 183 36.1
PGSC0003DMG400007191 Solanum tuberosum HOM05D006876 ORTHO05D008708 1.1e-22 110.5 177 36.2
Ah.13g077470 Amaranthus hybridus HOM05D006876 ORTHO05D008708 1.8e-22 109.8 180 36.1
Gorai.010G139600 Gossypium raimondii HOM05D006876 ORTHO05D008708 1.8e-22 109.8 182 35.7
Solyc10g076930.2 Solanum lycopersicum HOM05D006876 ORTHO05D008708 2.3e-22 109.4 177 36.7
CSS0024544 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 4.0e-22 108.6 182 35.7
Carub.0005s2355 Capsella rubella HOM05D006876 ORTHO05D008708 4.0e-22 108.6 188 34.0
vmacro07595 Vaccinium macrocarpon HOM05D006876 ORTHO05D008708 4.0e-22 108.6 207 33.3
Nitab4.5_0000123g0090 Nicotiana tabacum HOM05D006876 ORTHO05D008708 5.2e-22 108.2 182 35.2
PSO384G4569 Papaver somniferum HOM05D006876 ORTHO05D008708 5.2e-22 108.2 181 35.4
Thecc.05G117700 Theobroma cacao HOM05D006876 ORTHO05D008708 5.2e-22 108.2 176 35.8
BcaC07g39992 Brassica carinata HOM05D006876 ORTHO05D008708 6.8e-22 107.8 184 34.8
TWI53G1364 Tripterygium wilfordii HOM05D006876 ORTHO05D008708 6.8e-22 107.8 182 34.1
AL5G38200 Arabidopsis lyrata HOM05D006876 ORTHO05D008708 8.9e-22 107.5 185 36.8
MSTRG.10760 Avicennia marina HOM05D006876 ORTHO05D008708 8.9e-22 107.5 183 35.0
EL10Ac3g07376 Beta vulgaris HOM05D006876 ORTHO05D008708 8.9e-22 107.5 181 35.4
AUR62020968 Chenopodium quinoa HOM05D006876 ORTHO05D008708 1.2e-21 107.1 180 35.6
Glyma.19G122400 Glycine max HOM05D006876 ORTHO05D008708 1.2e-21 107.1 173 37.0
Sp5g05770 Schrenkiella parvula HOM05D006876 ORTHO05D008708 1.2e-21 107.1 187 34.8
C08p32050 Brassica napus HOM05D006876 ORTHO05D008708 1.5e-21 106.7 184 34.8
BolC8t50823H Brassica oleracea HOM05D006876 ORTHO05D008708 1.5e-21 106.7 184 34.8
Aa31LG10G11670 Aethionema arabicum HOM05D006876 ORTHO05D008708 2.0e-21 106.3 184 34.8
COL.COLO4_21445 Corchorus olitorius HOM05D006876 ORTHO05D008708 2.0e-21 106.3 177 35.0
Cc06_g21190 Coffea canephora HOM05D006876 ORTHO05D008708 2.6e-21 105.9 178 36.5
Migut.K00190 Erythranthe guttata HOM05D006876 ORTHO05D008708 4.4e-21 105.1 181 34.3
PSO339G4949 Papaver somniferum HOM05D006876 ORTHO05D008708 4.4e-21 105.1 181 34.3
THA.LOC104803253 Tarenaya hassleriana HOM05D006876 ORTHO05D008708 4.4e-21 105.1 188 34.6
unitig_899.g15477 Utricularia gibba HOM05D006876 ORTHO05D008708 5.8e-21 104.8 181 35.9
Hund24486 Selenicereus undatus HOM05D006876 ORTHO05D008708 9.8e-21 104.0 179 33.5
BcaC07g40117 Brassica carinata HOM05D006876 ORTHO05D008708 1.3e-20 103.6 186 34.9
Atru.chr8.919 Acer truncatum HOM05D006876 ORTHO05D008708 1.7e-20 103.2 183 35.0
Lsat_1_v5_gn_6_24200 Lactuca sativa HOM05D006876 ORTHO05D008708 1.7e-20 103.2 181 33.1
Duzib114G0933 Durio zibethinus HOM05D006876 ORTHO05D008708 2.2e-20 102.8 174 33.3
Sabra06G0019500 Salix brachista HOM05D006876 ORTHO05D008708 2.2e-20 102.8 177 35.6
AT3G56820 Arabidopsis thaliana HOM05D006876 ORTHO05D008708 3.7e-20 102.1 189 34.9
GSVIVG01025828001 Vitis vinifera HOM05D006876 ORTHO05D008708 4.9e-20 101.7 177 35.0
Nitab4.5_0002131g0070 Nicotiana tabacum HOM05D006876 ORTHO05D008708 8.3e-20 100.9 189 32.8
SGA_v2.0_scaffold123G33492 Striga asiatica HOM05D001269 ORTHO05D001083 8.3e-20 100.9 181 33.1
SalBow1G4764 Salvia bowleyana HOM05D006876 ORTHO05D008708 3.2e-19 99.0 180 32.8
VMungo1383G0045 Vigna mungo HOM05D006876 ORTHO05D008708 3.2e-19 99.0 173 35.3
Zm00001eb150270 Zea mays HOM05D006876 ORTHO05D008708 9.2e-19 97.4 176 32.4
Migut.K00192 Erythranthe guttata HOM05D006876 ORTHO05D008708 1.2e-18 97.1 175 33.1
TAR623G1567 Trochodendron aralioides HOM05D006876 ORTHO05D008708 1.2e-18 97.1 137 37.2
Aqoxy1G01501 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 2.1e-18 96.3 193 31.1
Hund24492 Selenicereus undatus HOM05D006876 ORTHO05D008708 2.1e-18 96.3 180 32.2
Sc19g0007790 Simmondsia chinensis HOM05D006876 ORTHO05D008708 2.1e-18 96.3 175 32.6
MBI19_g10813_MAGBIO Magnolia biondii HOM05D006876 ORTHO05D008708 2.7e-18 95.9 180 33.9
Os01g0810200 Oryza sativa ssp. japonica HOM05D006876 ORTHO05D008708 2.7e-18 95.9 176 34.1
Eucgr.K01704 Eucalyptus grandis HOM05D006876 ORTHO05D008708 1.7e-17 93.2 182 33.0
Haze_20349 Corylus avellana HOM05D006876 ORTHO05D008708 2.3e-17 92.8 216 28.7
Lalb_Chr02g0157641 Lupinus albus HOM05D006876 ORTHO05D008708 8.6e-17 90.9 106 50.9
Nn7g37203 Nelumbo nucifera HOM05D006876 ORTHO05D008708 1.6e-15 86.7 171 33.3
Psat3g083640 Pisum sativum HOM05D006876 ORTHO05D008708 1.1e-14 84.0 151 31.8
FvH4_1g29600 Fragaria vesca HOM05D006876 ORTHO05D008708 1.5e-13 80.1 93 47.3
Aqoxy1G01505 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 2.4e-11 72.8 113 33.6
SEGI_40976 Sequoiadendron giganteum HOM05D006876 ORTHO05D008708 5.4e-11 71.6 110 32.7
Oeu032953.2 Olea europaea HOM05D006876 ORTHO05D008708 1.0e-09 67.4 51 54.9
Hma1.2p1_0694F.1_g204350 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 1.3e-09 67.0 60 43.3
Actinidia37859 Actinidia chinensis HOM05D006876 ORTHO05D008708 1.7e-09 66.6 51 51.0
DCAR_020618 Daucus carota HOM05D006876 ORTHO05D008708 1.5e-08 63.5 44 61.4
Lj4A828G46 Lonicera japonica HOM05D006876 ORTHO05D008708 2.5e-08 62.8 49 53.1
ATR1096G134 Amborella trichopoda HOM05D006876 ORTHO05D008708 3.3e-08 62.4 129 29.5
QL05p001451 Quercus lobata HOM05D006876 ORTHO05D008708 4.3e-08 62.0 44 56.8
QL05p001731 Quercus lobata HOM05D006876 ORTHO05D008708 7.3e-08 61.2 44 56.8
QL05p085390 Quercus lobata HOM05D006876 ORTHO05D008708 7.3e-08 61.2 44 56.8
arahy.Tifrunner.gnm1.ann1.Q5BN79 Arachis hypogaea HOM05D006876 ORTHO05D008708 4.7e-07 58.5 40 67.5
Ca_08331_v3 Cicer arietinum L. HOM05D006876 ORTHO05D008708 1.4e-06 57.0 42 50.0
ECA233G0065 Erigeron canadensis HOM05D000444 ORTHO05D000489 1.8e-06 56.6 51 41.2
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 3.1e-06 55.8 40 62.5
DCAR_020619 Daucus carota HOM05D006876 ORTHO05D008708 3.1e-06 55.8 100 35.0
Oeu039192.1 Olea europaea HOM05D006876 ORTHO05D008708 5.2e-06 55.1 94 33.0


User provided reference genes

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