Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.EP7E6M Arachis hypogaea HOM05D002965 ORTHO05D010183 5.4e-136 487.6 243 100.0
arahy.Tifrunner.gnm1.ann1.CG3D8R Arachis hypogaea HOM05D002965 ORTHO05D010183 4.5e-135 484.6 243 99.6
arahy.Tifrunner.gnm1.ann1.I1QAK6 Arachis hypogaea HOM05D002965 ORTHO05D010183 4.5e-135 484.6 243 99.6
LjContig00315g0010995 Lotus japonicus HOM05D002965 ORTHO05D010183 3.5e-95 352.1 214 87.4
Sed0028066 Sechium edule HOM05D002965 ORTHO05D010183 1.2e-66 257.3 198 72.2
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 6.5e-65 251.5 158 82.3
Medtr0082s0280 Medicago truncatula HOM05D002965 ORTHO05D010183 4.2e-64 248.8 129 96.9
CsaV3_UNG209220 Cucumis sativus L. HOM05D002965 ORTHO05D010183 2.1e-63 246.5 137 92.7
QL05p039661 Quercus lobata HOM05D002965 ORTHO05D010183 4.6e-63 245.4 137 90.5
Hma1.2p1_1338F.1_g276549 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 8.8e-62 241.1 128 94.5
Hma1.2p1_1338F.1_g276560 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 8.8e-62 241.1 128 94.5
CAN.G309.4 Capsicum annuum HOM05D002965 ORTHO05D010183 1.5e-61 240.4 128 94.5
Cpa.g.sc263.23 Carica papaya HOM05D002965 ORTHO05D010183 4.3e-61 238.8 128 93.8
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 1.3e-60 237.3 122 96.7
SalBow1G8555 Salvia bowleyana HOM05D002965 ORTHO05D010183 1.5e-58 230.3 128 91.4
Dinv06704 Davidia involucrata HOM05D002965 ORTHO05D010183 3.4e-58 229.2 123 94.3
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 8.5e-57 224.6 119 95.0
Actinidia10888 Actinidia chinensis HOM05D002965 ORTHO05D010183 1.9e-56 223.4 176 73.3
Nitab4.5_0005831g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 6.7e-54 214.9 150 77.3
Sp3g25630 Schrenkiella parvula HOM05D002965 ORTHO05D010183 3.3e-53 212.6 128 85.9
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 2.8e-52 209.5 226 57.5
Nitab4.5_0005613g0040 Nicotiana tabacum HOM05D002965 ORTHO05D010183 6.3e-52 208.4 124 83.9
TPR.G40481 Trifolium pratense HOM05D002965 ORTHO05D010183 7.2e-48 194.9 100 98.0
SGA_v2.0_scaffold479G52282 Striga asiatica HOM05D002965 ORTHO05D010183 1.2e-47 194.1 106 91.5
unitig_87.g27935 Utricularia gibba HOM05D002965 ORTHO05D010183 1.8e-43 180.3 98 91.8
Nitab4.5_0000172g1470 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.4e-43 179.9 124 76.6
Psat6g191080 Pisum sativum HOM05D002965 ORTHO05D010183 7.2e-40 168.3 193 52.8
Hma1.2p1_0204F.1_g086870 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 9.4e-40 167.9 98 86.7
RcHm_v2.0_MTg0499241 Rosa chinensis HOM05D002965 ORTHO05D010183 6.1e-39 165.2 84 98.8
Hma1.2p1_0000F.1_g000060 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.4e-38 164.1 95 85.3
Medtr5g040110 Medicago truncatula HOM05D002965 ORTHO05D010183 6.8e-38 161.8 83 97.6
Potri.007G061981 Populus trichocarpa HOM05D002965 ORTHO05D010183 2.6e-37 159.8 82 97.6
HanXRQChr08g0212281 Helianthus annuus HOM05D002965 ORTHO05D010183 5.7e-37 158.7 83 96.4
HanXRQMTg0579441 Helianthus annuus HOM05D002965 ORTHO05D010183 5.7e-37 158.7 83 96.4
Nitab4.5_0001761g0080 Nicotiana tabacum HOM05D002965 ORTHO05D010183 7.5e-37 158.3 85 92.9
Lsat_1_v5_gn_4_66041 Lactuca sativa HOM05D002965 ORTHO05D010183 2.8e-36 156.4 83 95.2
CDE02G3239 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 3.7e-36 156.0 190 54.2
Aqoxy1G02687 Aquilegia oxysepala HOM05D002965 ORTHO05D010183 1.1e-35 154.5 83 94.0
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 1.1e-35 154.5 92 85.9
MELO3C031425.2 Cucumis melo HOM05D002965 ORTHO05D010183 1.0e-33 147.9 84 85.7
CAN.G1576.4 Capsicum annuum HOM05D002965 ORTHO05D010183 2.2e-33 146.7 92 83.7
SHI48910 Sapria himalayana HOM05D002965 ORTHO05D010183 5.0e-33 145.6 77 93.5
ATMG01120 Arabidopsis thaliana HOM05D002965 ORTHO05D010183 4.8e-28 129.0 64 98.4
BNapus_Darmor_BZH_scaffold_234p00020 Brassica napus HOM05D002965 ORTHO05D010183 8.3e-28 128.3 66 97.0
BolSC28t60382H Brassica oleracea HOM05D002965 ORTHO05D010183 8.3e-28 128.3 66 97.0
BolSC28t60415H Brassica oleracea HOM05D002965 ORTHO05D010183 8.3e-28 128.3 66 97.0
BraSC177t45752Z Brassica rapa HOM05D002965 ORTHO05D010183 8.3e-28 128.3 66 97.0
Peaxi162Scf00197g00037 Petunia axillaris HOM05D002965 ORTHO05D010183 8.3e-28 128.3 103 68.9
Hma1.2p1_0713F.1_g207720 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 2.4e-27 126.7 69 94.2
Sopen05g007970 Solanum pennellii HOM05D002965 ORTHO05D010183 9.1e-27 124.8 65 93.8
CDE02G2102 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 5.9e-26 122.1 191 47.6
Solyc10g018950.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 7.7e-26 121.7 101 65.3
Solyc00g118690.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 1.3e-25 120.9 63 96.8
CAN.G390.19 Capsicum annuum HOM05D002965 ORTHO05D010183 3.8e-25 119.4 72 87.5
BraSC48t46251Z Brassica rapa HOM05D002965 ORTHO05D010183 8.6e-25 118.2 60 98.3
Nitab4.5_0002418g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 7.2e-24 115.2 66 84.8
Lalb_Chr00c21g0405781 Lupinus albus HOM05D002965 ORTHO05D010183 9.5e-24 114.8 56 100.0
VMungo0647G1384 Vigna mungo HOM05D002965 ORTHO05D010183 1.6e-23 114.0 58 96.6
CAN.G1061.19 Capsicum annuum HOM05D002965 ORTHO05D010183 3.6e-23 112.8 58 96.6
CAN.G285.11 Capsicum annuum HOM05D002965 ORTHO05D010183 3.6e-23 112.8 58 96.6
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 3.6e-23 112.8 58 96.6
Nitab4.5_0001796g0410 Nicotiana tabacum HOM05D002965 ORTHO05D010183 8.0e-23 111.7 56 96.4
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 2.3e-22 110.2 85 71.8
CSS0026545 Camellia sinensis var. sinensis HOM05D002965 ORTHO05D010183 5.2e-22 109.0 101 62.4
ECA039G0012 Erigeron canadensis HOM05D002965 ORTHO05D010183 1.3e-20 104.4 55 94.5
Cfa022987 Carpinus fangiana HOM05D002965 ORTHO05D010183 2.2e-20 103.6 52 98.1
Nitab4.5_0002558g0140 Nicotiana tabacum HOM05D002965 ORTHO05D010183 4.1e-19 99.4 60 83.3
SMO053G0011 Selaginella moellendorffii HOM05D002965 ORTHO05D010183 5.9e-18 95.5 67 67.2
Mapoly0013s0013 Marchantia polymorpha HOM05D002965 ORTHO05D010183 2.1e-15 87.0 65 63.1
Nitab4.5_0000859g0160 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.0e-13 80.5 94 51.1
Dinv34203 Davidia involucrata HOM05D002965 ORTHO05D010183 2.7e-10 70.1 40 85.0
BolC7t41501H Brassica oleracea HOM05D002965 ORTHO05D010183 7.8e-10 68.6 36 88.9
SHI41349 Sapria himalayana HOM05D037518 ORTHO05D010183 1.3e-09 67.8 35 91.4
SHI29064 Sapria himalayana HOM05D002965 ORTHO05D010183 1.7e-09 67.4 63 58.7
arahy.Tifrunner.gnm1.ann1.24DU69 Arachis hypogaea HOM05D000834 ORTHO05D000909 1.2e-07 61.2 36 80.6
QL02p008127 Quercus lobata HOM05D003783 ORTHO05D004568 2.1e-07 60.5 38 78.9


User provided reference genes

Program Settings