Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.EJB7FV Arachis hypogaea HOM05D000003 ORTHO05D007254 9.5e-50 199.9 103 100.0
arahy.Tifrunner.gnm1.ann1.0Y1AJC Arachis hypogaea HOM05D027442 ORTHO05D000167 7.8e-20 100.5 89 56.2
arahy.Tifrunner.gnm1.ann1.MHV6FT Arachis hypogaea HOM05D027442 ORTHO05D007254 7.8e-20 100.5 89 56.2
Lj5g0008185 Lotus japonicus HOM05D000003 ORTHO05D007254 9.6e-10 67.0 89 37.1
LjContig00408g0023232 Lotus japonicus HOM05D000003 ORTHO05D000004 9.6e-10 67.0 89 39.3
Lj2g0007703 Lotus japonicus HOM05D000003 ORTHO05D000126 1.3e-09 66.6 102 35.3
Lj1g0015022 Lotus japonicus HOM05D000003 ORTHO05D000167 2.1e-09 65.9 100 38.0
arahy.Tifrunner.gnm1.ann1.M8IV8N Arachis hypogaea HOM05D000003 ORTHO05D007254 3.6e-09 65.1 79 46.8
Lj5g0027405 Lotus japonicus HOM05D000003 ORTHO05D007254 4.8e-09 64.7 89 37.1
Lj4g0020141 Lotus japonicus HOM05D000003 ORTHO05D000126 1.1e-08 63.5 102 34.3
Lj6g0001178 Lotus japonicus HOM05D000003 ORTHO05D000004 1.1e-08 63.5 89 36.0
Lj2g0001686 Lotus japonicus HOM05D000003 ORTHO05D007254 2.4e-08 62.4 89 34.8
Lj1g0027700 Lotus japonicus HOM05D000003 ORTHO05D025264 3.1e-08 62.0 88 34.1
Lj6g0004382 Lotus japonicus HOM05D000003 ORTHO05D000004 3.1e-08 62.0 98 31.6
BcaC01g02035 Brassica carinata HOM05D001239 ORTHO05D000925 4.0e-08 61.6 81 39.5
Lj1g0019137 Lotus japonicus HOM05D000003 ORTHO05D007254 5.3e-08 61.2 100 31.0
BolC6t39320H Brassica oleracea HOM05D001239 ORTHO05D000925 6.9e-08 60.8 85 34.1
Lj5g0011892 Lotus japonicus HOM05D000003 ORTHO05D007254 9.0e-08 60.5 89 34.8
Lj3g0020321 Lotus japonicus HOM05D000003 ORTHO05D000126 1.5e-07 59.7 89 31.5
Lj4g0019340 Lotus japonicus HOM05D000003 ORTHO05D000126 1.5e-07 59.7 89 31.5
AT2G34320 Arabidopsis thaliana HOM05D000003 ORTHO05D001091 4.5e-07 58.2 93 33.3
Atru.chr13.1628 Acer truncatum HOM05D000003 ORTHO05D000167 5.8e-07 57.8 90 37.8
Lj1g0000509 Lotus japonicus HOM05D000003 ORTHO05D000004 7.6e-07 57.4 88 34.1
AL3G48000 Arabidopsis lyrata HOM05D012944 ORTHO05D014028 1.3e-06 56.6 89 34.8
Lj1g0004661 Lotus japonicus HOM05D000003 ORTHO05D008897 1.3e-06 56.6 85 36.5
BraA05t23088Z Brassica rapa HOM05D001239 ORTHO05D000925 1.7e-06 56.2 89 31.5
AL2G28950 Arabidopsis lyrata HOM05D012944 ORTHO05D014028 2.2e-06 55.8 89 34.8
BcaC04g22514 Brassica carinata HOM05D001239 ORTHO05D027739 2.2e-06 55.8 92 35.9
BraA01t00376Z Brassica rapa HOM05D001239 ORTHO05D000925 2.2e-06 55.8 88 36.4
Prupe.3G190000 Prunus persica HOM05D008133 ORTHO05D009449 2.2e-06 55.8 93 34.4
Lj1g0020336 Lotus japonicus HOM05D000003 ORTHO05D007254 2.9e-06 55.5 89 32.6
LjContig00564g0011142 Lotus japonicus HOM05D000003 ORTHO05D007254 2.9e-06 55.5 100 32.0
Prupe.1G202000 Prunus persica HOM05D000003 ORTHO05D000004 2.9e-06 55.5 93 33.3
BolC3t19864H Brassica oleracea HOM05D001239 ORTHO05D000925 3.8e-06 55.1 85 35.3
BraA03t15429Z Brassica rapa HOM05D001239 ORTHO05D000925 3.8e-06 55.1 88 35.2
Lj3g0002323 Lotus japonicus HOM05D000003 ORTHO05D007254 3.8e-06 55.1 98 26.5
Thhalv10011157m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 4.9e-06 54.7 81 37.0
Atru.chr2.1933 Acer truncatum HOM05D000003 ORTHO05D000004 6.4e-06 54.3 90 35.6
BcaB07g32430 Brassica carinata HOM05D001239 ORTHO05D000925 6.4e-06 54.3 93 35.5
Lj2g0021189 Lotus japonicus HOM05D000003 ORTHO05D000004 6.4e-06 54.3 77 36.4
BraA08t34149Z Brassica rapa HOM05D001239 ORTHO05D000925 8.4e-06 53.9 82 35.4


User provided reference genes

Program Settings