Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8I3IQY Arachis hypogaea HOM05D007648 ORTHO05D009613 3.2e-34 147.9 78 100.0
arahy.Tifrunner.gnm1.ann1.EILY3I Arachis hypogaea HOM05D007648 ORTHO05D009613 3.2e-34 147.9 78 100.0
Lj5g0008894 Lotus japonicus HOM05D007648 ORTHO05D009613 1.2e-28 129.4 78 83.3
Lalb_Chr19g0131601 Lupinus albus HOM05D007648 ORTHO05D009613 2.7e-28 128.3 78 83.3
Phvul.001G002600 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 7.7e-28 126.7 78 84.6
Glyma.17G261200 Glycine max HOM05D007648 ORTHO05D009613 1.3e-27 125.9 77 81.8
Psat6g001120 Pisum sativum HOM05D007648 ORTHO05D009613 1.3e-27 125.9 78 82.1
Phvul.001G002300 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 1.7e-27 125.6 78 83.3
Ca_13484_v3 Cicer arietinum L. HOM05D007648 ORTHO05D009613 2.9e-27 124.8 78 80.8
RcHm_v2.0_Chr6g0303661 Rosa chinensis HOM05D007648 ORTHO05D009613 3.8e-27 124.4 77 80.5
Medtr1g026100 Medicago truncatula HOM05D007648 ORTHO05D009613 1.1e-26 122.9 78 79.5
GSVIVG01008741001 Vitis vinifera HOM05D007648 ORTHO05D009613 1.1e-26 122.9 78 80.8
VMungo0647G0751 Vigna mungo HOM05D007648 ORTHO05D009613 1.5e-26 122.5 75 84.0
FvH4_2g37960 Fragaria vesca HOM05D007648 ORTHO05D009613 1.9e-26 122.1 76 80.3
FAN20G1741 Fragaria x ananassa HOM05D007648 ORTHO05D009613 3.2e-26 121.3 76 80.3
Sabra14G0141300 Salix brachista HOM05D000525 ORTHO05D001368 3.2e-26 121.3 75 82.7
Prupe.1G359500 Prunus persica HOM05D007648 ORTHO05D009613 7.2e-26 120.2 77 77.9
FAN15G0474 Fragaria x ananassa HOM05D007648 ORTHO05D009613 1.6e-25 119.0 76 78.9
CiPaw.07G143700 Carya illinoinensis HOM05D007648 ORTHO05D009613 2.1e-25 118.6 77 80.5
QL02p012929 Quercus lobata HOM05D007648 ORTHO05D009613 2.1e-25 118.6 76 81.6
Dinv31891 Davidia involucrata HOM05D007648 ORTHO05D009613 2.7e-25 118.2 77 77.9
Lsat_1_v5_gn_5_1580 Lactuca sativa HOM05D007648 ORTHO05D009613 2.7e-25 118.2 77 79.2
Potri.014G181400 Populus trichocarpa HOM05D007648 ORTHO05D009613 2.7e-25 118.2 75 81.3
SalBow7G1731 Salvia bowleyana HOM05D007648 ORTHO05D009613 2.7e-25 118.2 78 79.5
AT1G76065 Arabidopsis thaliana HOM05D007648 ORTHO05D009613 3.6e-25 117.9 78 75.6
CARHR069590 Cardamine hirsuta HOM05D007648 ORTHO05D009613 3.6e-25 117.9 78 75.6
ECA238G3742 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-25 117.9 73 83.6
A08p09340 Brassica napus HOM05D007648 ORTHO05D009613 4.7e-25 117.5 78 75.6
BolC8t48002H Brassica oleracea HOM05D007648 ORTHO05D009613 4.7e-25 117.5 78 75.6
Ciclev10003012m.g Citrus clementina HOM05D007648 ORTHO05D009613 6.1e-25 117.1 77 76.6
Eucgr.F03708 Eucalyptus grandis HOM05D007648 ORTHO05D009613 6.1e-25 117.1 78 78.2
Carub.0002s2295 Capsella rubella HOM05D007648 ORTHO05D009613 8.0e-25 116.7 78 74.4
ClCG05G015420 Citrullus lanatus HOM05D007648 ORTHO05D009613 8.0e-25 116.7 77 72.7
Manes.05G142600 Manihot esculenta HOM05D007648 ORTHO05D009613 8.0e-25 116.7 77 79.2
Duzib093G2040 Durio zibethinus HOM05D007648 ORTHO05D009613 1.0e-24 116.3 78 78.2
TAR625G0376 Trochodendron aralioides HOM05D007648 ORTHO05D009613 1.0e-24 116.3 78 76.9
BcaC07g37632 Brassica carinata HOM05D007648 ORTHO05D009613 1.4e-24 115.9 78 74.4
Migut.C00899 Erythranthe guttata HOM05D007648 ORTHO05D009613 1.4e-24 115.9 78 76.9
TWI12G0541 Tripterygium wilfordii HOM05D007648 ORTHO05D009613 1.4e-24 115.9 77 75.3
AL2G36100 Arabidopsis lyrata HOM05D007648 ORTHO05D009613 1.8e-24 115.5 78 73.1
BcaB07g30075 Brassica carinata HOM05D007648 ORTHO05D009613 1.8e-24 115.5 78 74.4
BraA08t32933Z Brassica rapa HOM05D007648 ORTHO05D009613 1.8e-24 115.5 78 74.4
COL.COLO4_26084 Corchorus olitorius HOM05D007648 ORTHO05D009613 1.8e-24 115.5 77 77.9
MD15G1006800 Malus domestica HOM05D007648 ORTHO05D009613 1.8e-24 115.5 78 74.4
Sopen06g017690 Solanum pennellii HOM05D007648 ORTHO05D009613 1.8e-24 115.5 78 76.9
Hund05152 Selenicereus undatus HOM05D000399 ORTHO05D000304 2.3e-24 115.2 75 76.0
Aqoxy5G01099 Aquilegia oxysepala HOM05D007648 ORTHO05D009613 3.0e-24 114.8 78 76.9
CAN.G22.4 Capsicum annuum HOM05D007648 ORTHO05D009613 4.0e-24 114.4 78 74.4
Sed0006121 Sechium edule HOM05D007648 ORTHO05D009613 4.0e-24 114.4 78 71.8
PGSC0003DMG400023820 Solanum tuberosum HOM05D007648 ORTHO05D009613 4.0e-24 114.4 78 75.6
Thecc.08G051700 Theobroma cacao HOM05D007648 ORTHO05D009613 4.0e-24 114.4 77 77.9
THA.LOC104811443 Tarenaya hassleriana HOM05D007648 ORTHO05D009613 5.2e-24 114.0 77 76.6
Haze_22702 Corylus avellana HOM05D007648 ORTHO05D009613 6.8e-24 113.6 75 80.0
Atru.chr13.217 Acer truncatum HOM05D007648 ORTHO05D009613 8.8e-24 113.2 75 80.0
Thhalv10019391m.g Eutrema salsugineum HOM05D007648 ORTHO05D009613 8.8e-24 113.2 78 74.4
MD08G1007600 Malus domestica HOM05D007648 ORTHO05D009613 8.8e-24 113.2 78 74.4
CSS0030217 Camellia sinensis var. sinensis HOM05D007648 ORTHO05D009613 1.2e-23 112.8 78 75.6
HanXRQChr06g0185111 Helianthus annuus HOM05D007648 ORTHO05D009613 1.5e-23 112.5 77 76.6
Aa31LG4G6180 Aethionema arabicum HOM05D007648 ORTHO05D009613 5.7e-23 110.5 76 73.7
Sc02g0008880 Simmondsia chinensis HOM05D007648 ORTHO05D009613 7.5e-23 110.2 77 74.0
DCAR_021446 Daucus carota HOM05D007648 ORTHO05D009613 1.3e-22 109.4 78 71.8
Sc02g0008840 Simmondsia chinensis HOM05D007648 ORTHO05D009613 1.3e-22 109.4 77 74.0
Gohir.D01G035600 Gossypium hirsutum HOM05D007648 ORTHO05D009613 1.7e-22 109.0 77 74.0
Rhsim07G0248300 Rhododendron simsii HOM05D007648 ORTHO05D009613 1.7e-22 109.0 78 73.1
BraA02t08664Z Brassica rapa HOM05D007648 ORTHO05D009613 2.2e-22 108.6 75 73.3
Gorai.002G043700 Gossypium raimondii HOM05D007648 ORTHO05D009613 2.2e-22 108.6 77 74.0
vmacro17151 Vaccinium macrocarpon HOM05D007648 ORTHO05D009613 2.2e-22 108.6 78 73.1
Actinidia29767 Actinidia chinensis HOM05D007648 ORTHO05D009613 2.8e-22 108.2 77 74.0
EL10Ac1g02083 Beta vulgaris HOM05D000399 ORTHO05D000304 2.8e-22 108.2 76 72.4
MELO3C003728.2 Cucumis melo HOM05D007648 ORTHO05D009613 2.8e-22 108.2 77 68.8
Ah.00g000660 Amaranthus hybridus HOM05D007648 ORTHO05D009613 3.7e-22 107.8 75 72.0
CsaV3_3G046120 Cucumis sativus L. HOM05D007648 ORTHO05D009613 3.7e-22 107.8 77 68.8
Gohir.A01G044700 Gossypium hirsutum HOM05D007648 ORTHO05D009613 3.7e-22 107.8 77 72.7
Os02g0667000 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 8.3e-22 106.7 77 70.1
Rhsim07G0248100 Rhododendron simsii HOM05D007648 ORTHO05D009613 1.1e-21 106.3 77 74.0
CAN.G22.7 Capsicum annuum HOM05D007648 ORTHO05D009613 5.4e-21 104.0 76 71.1
PSO210G3155 Papaver somniferum HOM05D007648 ORTHO05D009613 1.6e-20 102.4 75 70.7
Cc10_g01140 Coffea canephora HOM05D007648 ORTHO05D009613 2.7e-20 101.7 76 68.4
BolC2t11627H Brassica oleracea HOM05D007648 ORTHO05D009613 1.0e-19 99.8 78 67.9
HPP92_026879 Vanilla planifolia HOM05D007648 ORTHO05D009613 5.0e-19 97.4 77 66.2
HPP92_003481 Vanilla planifolia HOM05D007648 ORTHO05D009613 6.6e-19 97.1 77 64.9
CDE04G2628 Ceratophyllum demersum HOM05D007648 ORTHO05D009613 1.5e-18 95.9 76 67.1
Nitab4.5_0004193g0030 Nicotiana tabacum HOM05D000998 ORTHO05D000806 1.9e-18 95.5 66 74.2
Peaxi162Scf00394g00212 Petunia axillaris HOM05D007648 ORTHO05D009613 4.7e-17 90.9 65 72.3
Nitab4.5_0000716g0050 Nicotiana tabacum HOM05D000998 ORTHO05D000806 1.4e-16 89.4 61 75.4
A02p36690 Brassica napus HOM05D007648 ORTHO05D009613 6.8e-16 87.0 60 71.7
MBI05_g46751_MAGBIO Magnolia biondii HOM05D007648 ORTHO05D009613 8.9e-16 86.7 69 63.8
C02p55750 Brassica napus HOM05D007648 ORTHO05D009613 1.2e-15 86.3 66 65.2
Mapoly0088s0028 Marchantia polymorpha HOM05D007648 ORTHO05D009613 3.4e-15 84.7 77 55.8
AUR62036713 Chenopodium quinoa HOM05D000399 ORTHO05D000304 7.5e-15 83.6 130 42.3
AagrBONN_evm.TU.Sc2ySwM_344.3278 Anthoceros agrestis HOM05D007648 ORTHO05D009613 1.2e-12 76.3 76 50.0
AUR62013884 Chenopodium quinoa HOM05D007648 ORTHO05D009613 5.9e-12 73.9 44 79.5
Pp3c8_20950 Physcomitrium patens HOM05D007648 ORTHO05D009613 7.8e-12 73.6 77 49.4
SalBow1G6040 Salvia bowleyana HOM05D038733 ORTHO05D009613 7.8e-12 73.6 47 76.6
SalBow7G3523 Salvia bowleyana HOM05D038733 ORTHO05D009613 7.8e-12 73.6 47 76.6
unitig_748.g7721 Utricularia gibba HOM05D007648 ORTHO05D009613 5.0e-11 70.9 65 55.4
Os03g0159800 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 5.6e-10 67.4 46 69.6
Actinidia37950 Actinidia chinensis HOM05D007648 ORTHO05D009613 7.5e-07 57.0 38 71.1
BcaC03g17585 Brassica carinata HOM05D007648 ORTHO05D009613 6.4e-06 53.9 76 44.7


User provided reference genes

Program Settings