Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.77ZW6W Arachis hypogaea HOM05D001966 ORTHO05D007227 4.4e-77 291.2 144 100.0
arahy.Tifrunner.gnm1.ann1.EGZ6K4 Arachis hypogaea HOM05D001966 ORTHO05D007227 4.4e-77 291.2 144 100.0
arahy.Tifrunner.gnm1.ann1.6ZZ12G Arachis hypogaea HOM05D001966 ORTHO05D007227 1.7e-68 262.7 144 91.0
arahy.Tifrunner.gnm1.ann1.KZKE62 Arachis hypogaea HOM05D001966 ORTHO05D007227 1.7e-65 252.7 126 99.2
arahy.Tifrunner.gnm1.ann1.I9YN8I Arachis hypogaea HOM05D001966 ORTHO05D007227 2.5e-64 248.8 144 86.8
arahy.Tifrunner.gnm1.ann1.ZHN7AL Arachis hypogaea HOM05D001966 ORTHO05D007227 2.7e-50 202.2 98 100.0
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 3.0e-49 198.7 98 98.0
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 3.0e-49 198.7 99 98.0
Cfa023004 Carpinus fangiana HOM05D001966 ORTHO05D007227 8.9e-46 187.2 98 93.9
Medtr0002s0250 Medicago truncatula HOM05D001966 ORTHO05D007227 8.9e-46 187.2 98 93.9
Medtr3g035620 Medicago truncatula HOM05D001966 ORTHO05D007227 8.9e-46 187.2 98 93.9
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 2.0e-45 186.0 98 92.9
RhsimPtG0005300 Rhododendron simsii HOM05D001966 ORTHO05D007227 7.5e-45 184.1 98 92.9
HPP92_028396 Vanilla planifolia HOM05D001966 ORTHO05D007227 1.1e-43 180.3 142 69.7
HPP92_028404 Vanilla planifolia HOM05D001966 ORTHO05D007227 1.1e-43 180.3 142 69.7
HPP92_028413 Vanilla planifolia HOM05D001966 ORTHO05D007227 1.1e-43 180.3 142 69.7
HPP92_028421 Vanilla planifolia HOM05D001966 ORTHO05D007227 1.1e-43 180.3 142 69.7
HPP92_028428 Vanilla planifolia HOM05D001966 ORTHO05D007227 1.1e-43 180.3 142 69.7
HPP92_028434 Vanilla planifolia HOM05D001966 ORTHO05D007227 1.1e-43 180.3 142 69.7
EL10As10g23965 Beta vulgaris HOM05D001966 ORTHO05D007227 1.4e-43 179.9 114 82.5
HPP92_028385 Vanilla planifolia HOM05D001966 ORTHO05D007227 1.9e-43 179.5 98 88.8
Sed0014217 Sechium edule HOM05D001966 ORTHO05D007227 2.1e-42 176.0 98 87.8
Sc25g0002010 Simmondsia chinensis HOM05D001966 ORTHO05D007227 3.5e-42 175.3 100 89.0
CDE02G0843 Ceratophyllum demersum HOM05D001966 ORTHO05D007227 1.5e-40 169.9 92 90.2
DCAR_001522 Daucus carota HOM05D001966 ORTHO05D007227 5.6e-40 167.9 98 85.7
arahy.Tifrunner.gnm1.ann1.3I0RGA Arachis hypogaea HOM05D001966 ORTHO05D007227 7.3e-40 167.5 93 87.1
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 1.1e-38 163.7 87 90.8
EL10Ac8g19705 Beta vulgaris HOM05D001966 ORTHO05D007227 8.9e-38 160.6 100 83.0
LjContig00319g0014927 Lotus japonicus HOM05D001966 ORTHO05D007227 1.5e-37 159.8 99 83.8
SHI36539 Sapria himalayana HOM05D001966 ORTHO05D007227 6.6e-33 144.4 77 93.5
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 8.6e-33 144.1 126 64.3
arahy.Tifrunner.gnm1.ann1.FN7561 Arachis hypogaea HOM05D001966 ORTHO05D007227 1.1e-32 143.7 110 70.9
SHI36394 Sapria himalayana HOM05D001966 ORTHO05D007227 5.6e-32 141.4 78 88.5
Gohir.1Z049882 Gossypium hirsutum HOM05D001966 ORTHO05D007227 1.2e-29 133.7 71 91.5
Gohir.A04G039270 Gossypium hirsutum HOM05D001966 ORTHO05D007227 1.2e-29 133.7 71 91.5
Gohir.A05G323724 Gossypium hirsutum HOM05D001966 ORTHO05D007227 1.2e-29 133.7 71 91.5
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 2.6e-29 132.5 67 92.5
Hma1.2p1_0544F.1_g175783 Hydrangea macrophylla HOM05D001966 ORTHO05D007227 3.4e-29 132.1 68 92.6
VMungo1127G1224 Vigna mungo HOM05D001966 ORTHO05D007227 5.8e-29 131.3 67 91.0
Sed0012652 Sechium edule HOM05D001966 ORTHO05D007227 4.9e-28 128.3 68 89.7
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 6.4e-28 127.9 68 89.7
VMungo0464G1535 Vigna mungo HOM05D001966 ORTHO05D007227 1.1e-27 127.1 67 89.6
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 3.2e-27 125.6 68 88.2
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 3.2e-27 125.6 68 88.2
Phvul.003G067400 Phaseolus vulgaris HOM05D001966 ORTHO05D007227 4.1e-27 125.2 67 85.1
BolSC29t60539H Brassica oleracea HOM05D001966 ORTHO05D007227 1.2e-26 123.6 64 92.2
BolSC29t60556H Brassica oleracea HOM05D001966 ORTHO05D007227 1.2e-26 123.6 64 92.2
BolSC35t60713H Brassica oleracea HOM05D001966 ORTHO05D007227 1.2e-26 123.6 64 92.2
BolSC44t60814H Brassica oleracea HOM05D001966 ORTHO05D007227 1.2e-26 123.6 64 92.2
BolSC45t60900H Brassica oleracea HOM05D001966 ORTHO05D007227 1.2e-26 123.6 64 92.2
BolSC45t60918H Brassica oleracea HOM05D001966 ORTHO05D007227 1.2e-26 123.6 64 92.2
BolSC46t60967H Brassica oleracea HOM05D001966 ORTHO05D007227 1.2e-26 123.6 64 92.2
BolSC49t61133H Brassica oleracea HOM05D001966 ORTHO05D007227 1.2e-26 123.6 64 92.2
BraSC103t45419Z Brassica rapa HOM05D001966 ORTHO05D007227 1.2e-26 123.6 64 92.2
BraSC25t45921Z Brassica rapa HOM05D001966 ORTHO05D007227 1.2e-26 123.6 64 92.2
BraSC59t46509Z Brassica rapa HOM05D001966 ORTHO05D007227 1.2e-26 123.6 64 92.2
BraSC59t46540Z Brassica rapa HOM05D001966 ORTHO05D007227 1.2e-26 123.6 64 92.2
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 2.7e-26 122.5 64 90.6
Lsat_1_v5_gn_3_110440 Lactuca sativa HOM05D001966 ORTHO05D007227 2.7e-26 122.5 64 90.6
Lsat_1_v5_gn_4_147680 Lactuca sativa HOM05D001966 ORTHO05D007227 2.7e-26 122.5 64 90.6
Lsat_1_v5_gn_4_147860 Lactuca sativa HOM05D001966 ORTHO05D007227 2.7e-26 122.5 64 90.6
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 2.7e-26 122.5 64 90.6
Lsat_1_v5_gn_9_39281 Lactuca sativa HOM05D001966 ORTHO05D007227 2.7e-26 122.5 64 90.6
Potri.011G074201 Populus trichocarpa HOM05D001966 ORTHO05D007227 6.0e-26 121.3 61 93.4
Glyma.08G276350 Glycine max HOM05D001966 ORTHO05D007227 2.3e-25 119.4 96 60.4
Lsat_1_v5_gn_6_94301 Lactuca sativa HOM05D001966 ORTHO05D007227 1.5e-24 116.7 64 87.5
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 5.6e-24 114.8 70 82.9
Aqoxy2G01968 Aquilegia oxysepala HOM05D001966 ORTHO05D007227 1.2e-23 113.6 61 86.9
arahy.Tifrunner.gnm1.ann1.EF1F4B Arachis hypogaea HOM05D000963 ORTHO05D010073 3.6e-23 112.1 91 73.6
Gohir.D02G016950 Gossypium hirsutum HOM05D001966 ORTHO05D007227 3.6e-23 112.1 63 85.7
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 8.1e-23 110.9 57 91.2
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 8.1e-23 110.9 57 91.2
arahy.Tifrunner.gnm1.ann1.F2PHFK Arachis hypogaea HOM05D000890 ORTHO05D000697 1.8e-22 109.8 50 100.0
FvH4_c3g00070 Fragaria vesca HOM05D001966 ORTHO05D007227 4.0e-22 108.6 66 86.4
Gorai.005G020800 Gossypium raimondii HOM05D001966 ORTHO05D007227 4.0e-22 108.6 104 59.6
ClCG11G009300 Citrullus lanatus HOM05D001966 ORTHO05D007227 6.9e-22 107.8 55 90.9
Glyma.05G084525 Glycine max HOM05D001966 ORTHO05D007227 2.0e-21 106.3 68 73.5
FAN01G2668 Fragaria x ananassa HOM05D001966 ORTHO05D007227 2.6e-21 105.9 66 84.8
HanXRQChr05g0134861 Helianthus annuus HOM05D001966 ORTHO05D007227 3.4e-21 105.5 58 86.2
Glyma.09G133875 Glycine max HOM05D001966 ORTHO05D007227 2.9e-20 102.4 61 80.3
Sed0001460 Sechium edule HOM05D001966 ORTHO05D007227 2.9e-20 102.4 52 90.4
Lsat_1_v5_gn_3_13340 Lactuca sativa HOM05D001966 ORTHO05D007227 3.2e-19 99.0 57 82.5
BolSC29t60498H Brassica oleracea HOM05D001966 ORTHO05D007227 1.6e-18 96.7 50 90.0
BolSC35t60683H Brassica oleracea HOM05D001966 ORTHO05D007227 1.6e-18 96.7 50 90.0
BolSC44t60831H Brassica oleracea HOM05D001966 ORTHO05D007227 1.6e-18 96.7 50 90.0
arahy.Tifrunner.gnm1.ann1.ZUEQ40 Arachis hypogaea HOM05D000743 ORTHO05D007227 7.8e-18 94.4 56 83.9
Atru.chr9.266 Acer truncatum HOM05D001966 ORTHO05D007227 2.3e-17 92.8 51 92.2
Psat5g118880 Pisum sativum HOM05D001966 ORTHO05D007227 2.3e-17 92.8 52 90.4
arahy.Tifrunner.gnm1.ann1.Q8ISGW Arachis hypogaea HOM05D001966 ORTHO05D007227 1.9e-16 89.7 47 87.2
Peaxi162Scf00080g00518 Petunia axillaris HOM05D001966 ORTHO05D007227 3.3e-16 89.0 52 80.8
CAN.G1441.4 Capsicum annuum HOM05D001966 ORTHO05D007227 6.2e-15 84.7 64 70.3
Sed0026700 Sechium edule HOM05D001966 ORTHO05D007227 6.2e-15 84.7 95 54.7
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 8.1e-15 84.3 63 66.7
FAN13G0121 Fragaria x ananassa HOM05D001966 ORTHO05D007227 1.4e-14 83.6 66 71.2
Gohir.D02G151976 Gossypium hirsutum HOM05D001966 ORTHO05D010449 4.0e-14 82.0 76 61.8
Gorai.006G045900 Gossypium raimondii HOM05D001966 ORTHO05D007227 6.9e-14 81.3 66 63.6
EL10As15g24131 Beta vulgaris HOM05D001966 ORTHO05D007227 9.0e-14 80.9 52 76.9
TPR.G6399 Trifolium pratense HOM05D001966 ORTHO05D007227 2.0e-13 79.7 64 67.2
arahy.Tifrunner.gnm1.ann1.N1DH3R Arachis hypogaea HOM05D001966 ORTHO05D007227 2.6e-13 79.3 58 70.7
HPP92_008300 Vanilla planifolia HOM05D001966 ORTHO05D007227 4.5e-13 78.6 57 71.9
Hma1.2p1_0544F.1_g175786 Hydrangea macrophylla HOM05D001966 ORTHO05D007227 1.3e-12 77.0 37 94.6
LjContig00318g0013893 Lotus japonicus HOM05D004182 ORTHO05D007321 6.4e-12 74.7 73 56.2
Sed0008904 Sechium edule HOM05D001966 ORTHO05D007227 4.2e-11 72.0 49 67.3
LjContig00489g0013211 Lotus japonicus HOM05D001966 ORTHO05D007227 1.3e-09 67.0 105 43.8
Oeu041170.1 Olea europaea HOM05D000708 ORTHO05D007227 1.3e-09 67.0 35 91.4
arahy.Tifrunner.gnm1.ann1.WHCD0B Arachis hypogaea HOM05D001966 ORTHO05D007227 2.3e-09 66.2 94 43.6
Gohir.A09G039165 Gossypium hirsutum HOM05D001966 ORTHO05D007227 1.5e-08 63.5 49 65.3
Gohir.D09G040060 Gossypium hirsutum HOM05D001966 ORTHO05D007227 1.5e-08 63.5 48 64.6
MELO3C027875.2 Cucumis melo HOM05D001966 ORTHO05D007227 8.1e-07 57.8 33 78.8
Phvul.003G142600 Phaseolus vulgaris HOM05D001966 ORTHO05D007227 3.1e-06 55.8 36 80.6


User provided reference genes

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