Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 5.5e-119 431.0 225 100.0
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 1.0e-117 426.8 225 98.7
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 1.3e-88 330.1 215 79.5
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 7.3e-87 324.3 223 76.2
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 8.1e-86 320.9 214 78.5
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 1.5e-84 316.6 218 79.4
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 2.6e-84 315.8 216 76.4
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 3.4e-84 315.5 222 76.1
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 4.9e-83 311.6 222 76.1
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 1.0e-80 303.9 210 78.6
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 4.4e-68 261.9 220 64.5
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 1.3e-67 260.4 222 65.3
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 2.4e-66 256.1 218 63.8
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 2.1e-65 253.1 220 63.6
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 3.5e-65 252.3 220 63.2
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.0e-64 250.8 222 62.2
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 1.7e-64 250.0 220 62.7
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.7e-64 250.0 222 61.7
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 6.6e-64 248.1 219 62.6
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 8.7e-64 247.7 222 61.7
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 1.5e-63 246.9 219 61.2
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 7.3e-63 244.6 217 64.1
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 9.6e-63 244.2 222 60.4
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 1.6e-62 243.4 166 78.9
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 6.2e-62 241.5 221 57.5
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 2.4e-61 239.6 223 60.5
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 5.3e-61 238.4 222 59.0
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 1.5e-60 236.9 215 58.6
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 4.4e-60 235.3 208 62.5
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 1.7e-59 233.4 209 60.8
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 1.7e-59 233.4 220 62.3
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 1.7e-59 233.4 221 56.6
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 3.2e-58 229.2 218 56.9
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 5.4e-58 228.4 221 57.9
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 7.1e-58 228.0 223 57.0
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 9.3e-58 227.6 219 56.2
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 2.1e-57 226.5 219 56.6
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 6.0e-57 224.9 214 56.1
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 6.0e-57 224.9 221 57.5
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 7.9e-57 224.6 223 55.6
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 3.0e-56 222.6 222 56.8
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 1.5e-55 220.3 221 53.8
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 1.5e-55 220.3 222 52.7
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 3.3e-55 219.2 222 52.7
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 2.8e-54 216.1 188 62.8
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 3.6e-54 215.7 224 53.1
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 4.0e-53 212.2 199 59.3
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 5.3e-53 211.8 218 53.2
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 5.3e-53 211.8 218 53.7
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 9.0e-53 211.1 220 51.8
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 9.0e-53 211.1 210 55.2
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 1.5e-52 210.3 255 47.8
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 4.5e-52 208.8 220 50.9
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 4.5e-52 208.8 222 53.2
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 4.5e-52 208.8 222 53.2
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 9.9e-52 207.6 224 52.7
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 1.3e-51 207.2 214 54.2
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 2.2e-51 206.5 222 52.7
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 2.9e-51 206.1 211 55.9
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 2.9e-51 206.1 221 51.6
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 3.8e-51 205.7 222 52.3
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 4.9e-51 205.3 222 51.4
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 6.4e-51 204.9 221 50.2
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 1.4e-50 203.8 181 63.0
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 3.5e-49 199.1 186 60.8
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 6.7e-48 194.9 221 49.3
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 1.1e-47 194.1 222 50.0
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 1.5e-47 193.7 220 48.6
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 2.1e-46 189.9 222 49.1
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 4.0e-45 185.7 168 62.5
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 6.9e-45 184.9 168 62.5
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.3e-43 180.6 168 61.9
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 2.2e-43 179.9 204 51.5
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 1.4e-42 177.2 199 53.3
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 3.5e-41 172.6 287 40.1
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 4.6e-41 172.2 220 43.2
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 4.6e-41 172.2 202 48.0
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 8.7e-40 167.9 216 44.9
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 2.5e-39 166.4 166 57.2
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 9.6e-39 164.5 205 46.3
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 8.2e-38 161.4 141 61.0
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 4.5e-36 155.6 215 40.9
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 8.4e-35 151.4 146 55.5
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 2.3e-32 143.3 223 39.0
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 1.2e-28 131.0 106 64.2
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 4.5e-28 129.0 159 48.4
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 3.8e-27 125.9 182 44.5
Glyma.04G070700 Glycine max HOM05D007522 ORTHO05D009518 1.1e-26 124.4 100 63.0
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 1.4e-26 124.0 95 68.4
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 1.4e-24 117.5 219 39.7
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 4.3e-23 112.5 217 33.6
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 3.8e-19 99.4 138 42.0
Cfa021321 Carpinus fangiana HOM05D007522 ORTHO05D009518 7.4e-15 85.1 88 54.5
Glyma.04G070800 Glycine max HOM05D007522 ORTHO05D009518 3.7e-14 82.8 61 65.6
SEGI_07807 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 3.2e-10 69.7 72 50.0
VMungo1309G0092 Vigna mungo HOM05D007522 ORTHO05D009518 2.1e-09 67.0 45 68.9
MD08G1138600 Malus domestica HOM05D007522 ORTHO05D009518 2.7e-09 66.6 108 42.6


User provided reference genes

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