Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.EDY71B Arachis hypogaea HOM05D000172 ORTHO05D008216 8.5e-104 380.6 223 100.0
Psat2g026560 Pisum sativum HOM05D000172 ORTHO05D008216 2.2e-67 259.6 198 69.2
Glyma.02G267200 Glycine max HOM05D000172 ORTHO05D008216 6.4e-67 258.1 195 69.2
LjContig00029g0008644 Lotus japonicus HOM05D000172 ORTHO05D008216 1.1e-66 257.3 208 69.2
Phvul.008G214900 Phaseolus vulgaris HOM05D000172 ORTHO05D008216 3.5e-65 252.3 195 66.7
Lalb_Chr17g0347191 Lupinus albus HOM05D000172 ORTHO05D008216 4.6e-65 251.9 194 68.6
TPR.G25655 Trifolium pratense HOM05D000172 ORTHO05D008216 5.9e-65 251.5 196 70.9
VMungo0647G0578 Vigna mungo HOM05D000172 ORTHO05D008216 5.9e-65 251.5 196 65.3
Cfa014307 Carpinus fangiana HOM05D000172 ORTHO05D008216 2.3e-64 249.6 194 66.0
Medtr5g084980 Medicago truncatula HOM05D000172 ORTHO05D008216 9.5e-63 244.2 207 67.6
Ciclev10016727m.g Citrus clementina HOM05D000172 ORTHO05D008216 1.6e-62 243.4 194 66.5
Eucgr.K00733 Eucalyptus grandis HOM05D000172 ORTHO05D008216 2.1e-62 243.0 195 65.1
TAR624G1331 Trochodendron aralioides HOM05D000172 ORTHO05D008216 4.7e-62 241.9 196 62.2
Sabra14G0121300 Salix brachista HOM05D000172 ORTHO05D008216 2.3e-61 239.6 187 66.3
Thecc.01G183500 Theobroma cacao HOM05D000172 ORTHO05D008216 2.0e-60 236.5 194 64.9
MD09G1115500 Malus domestica HOM05D000172 ORTHO05D000781 2.6e-60 236.1 190 61.6
COL.COLO4_06741 Corchorus olitorius HOM05D000172 ORTHO05D008216 9.8e-60 234.2 181 64.6
MD17G1107300 Malus domestica HOM05D000172 ORTHO05D008216 1.3e-59 233.8 188 62.8
Gohir.A07G168450 Gossypium hirsutum HOM05D000172 ORTHO05D008216 1.7e-59 233.4 194 64.9
Atru.chr6.3270 Acer truncatum HOM05D000172 ORTHO05D008216 2.2e-59 233.0 197 61.4
Gohir.D07G174800 Gossypium hirsutum HOM05D000172 ORTHO05D008216 4.9e-59 231.9 194 63.9
Potri.014G159600 Populus trichocarpa HOM05D000172 ORTHO05D008216 4.9e-59 231.9 187 65.8
Nn1g03358 Nelumbo nucifera HOM05D000172 ORTHO05D008216 8.3e-59 231.1 190 60.5
Duzib138G0791 Durio zibethinus HOM05D000172 ORTHO05D000781 1.1e-58 230.7 155 72.3
Prupe.3G209000 Prunus persica HOM05D000172 ORTHO05D008216 1.1e-58 230.7 190 60.5
Manes.13G066180 Manihot esculenta HOM05D000172 ORTHO05D008216 2.4e-58 229.6 194 62.9
PGR142G2841 Punica granatum HOM05D000172 ORTHO05D008216 3.2e-58 229.2 185 66.5
CSS0028035 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000781 7.0e-58 228.0 193 60.1
Gorai.001G195500 Gossypium raimondii HOM05D000172 ORTHO05D008216 1.2e-57 227.3 194 62.9
Peaxi162Scf01333g00137 Petunia axillaris HOM05D000172 ORTHO05D008216 1.6e-57 226.9 195 59.0
RcHm_v2.0_Chr2g0157891 Rosa chinensis HOM05D000172 ORTHO05D008216 4.6e-57 225.3 194 56.7
PGSC0003DMG400000660 Solanum tuberosum HOM05D000172 ORTHO05D008216 2.3e-56 223.0 196 58.2
Sopen07g024820 Solanum pennellii HOM05D000172 ORTHO05D008216 3.0e-56 222.6 196 58.2
MBI16_g26181_MAGBIO Magnolia biondii HOM05D000172 ORTHO05D008216 5.0e-56 221.9 187 59.9
FvH4_6g41990 Fragaria vesca HOM05D000172 ORTHO05D008216 6.6e-56 221.5 174 58.0
CANSAT78G2170 Cannabis sativa HOM05D000172 ORTHO05D000781 1.5e-55 220.3 155 70.3
FAN14G3302 Fragaria x ananassa HOM05D000172 ORTHO05D008216 1.9e-55 219.9 174 57.5
FAN14G3681 Fragaria x ananassa HOM05D000172 ORTHO05D008216 1.9e-55 219.9 174 57.5
Hma1.2p1_2406F.1_g321460 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 1.9e-55 219.9 192 55.2
Hma1.2p1_0405F.1_g145530 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 3.3e-55 219.2 192 55.2
FAN05G3852 Fragaria x ananassa HOM05D000172 ORTHO05D008216 7.3e-55 218.0 172 58.1
CAN.G784.10 Capsicum annuum HOM05D000172 ORTHO05D008216 1.6e-54 216.9 196 57.1
FAN09G4057 Fragaria x ananassa HOM05D000172 ORTHO05D000781 1.6e-54 216.9 194 55.2
Nitab4.5_0010117g0030 Nicotiana tabacum HOM05D000172 ORTHO05D008216 3.6e-54 215.7 195 57.4
MSTRG.14128 Avicennia marina HOM05D000172 ORTHO05D008216 4.7e-54 215.3 185 60.5
MELO3C019724.2 Cucumis melo HOM05D000172 ORTHO05D008216 4.7e-54 215.3 196 57.7
FAN02G3472 Fragaria x ananassa HOM05D000172 ORTHO05D008216 6.2e-54 214.9 174 56.9
Sed0000051 Sechium edule HOM05D000172 ORTHO05D008216 6.2e-54 214.9 195 56.9
ClCG02G018130 Citrullus lanatus HOM05D000172 ORTHO05D008216 8.1e-54 214.5 169 66.3
Atru.chr6.3269 Acer truncatum HOM05D000172 ORTHO05D008216 1.4e-53 213.8 155 68.4
Cpa.g.sc132.32 Carica papaya HOM05D000172 ORTHO05D008216 1.8e-53 213.4 164 64.0
Sc12g0002040 Simmondsia chinensis HOM05D000172 ORTHO05D008216 1.8e-53 213.4 196 57.7
Nitab4.5_0000130g0110 Nicotiana tabacum HOM05D000172 ORTHO05D008216 2.3e-53 213.0 195 55.9
Aqoxy1G04174 Aquilegia oxysepala HOM05D000172 ORTHO05D008216 3.1e-53 212.6 195 56.4
TWI36G0853 Tripterygium wilfordii HOM05D000172 ORTHO05D000781 8.9e-53 211.1 155 68.4
Rhsim06G0168800 Rhododendron simsii HOM05D000172 ORTHO05D008216 1.2e-52 210.7 203 52.7
Sed0027341 Sechium edule HOM05D000172 ORTHO05D008216 1.5e-52 210.3 196 55.6
CsaV3_6G015520 Cucumis sativus L. HOM05D000172 ORTHO05D008216 2.0e-52 209.9 196 57.1
GSVIVG01030516001 Vitis vinifera HOM05D000172 ORTHO05D008216 4.4e-52 208.8 194 57.2
Actinidia13731 Actinidia chinensis HOM05D000172 ORTHO05D008216 5.8e-52 208.4 176 58.0
THA.LOC104826130 Tarenaya hassleriana HOM05D000172 ORTHO05D008216 8.3e-51 204.5 186 56.5
SGA_v2.0_scaffold49G18358 Striga asiatica HOM05D000172 ORTHO05D008216 3.2e-50 202.6 181 58.0
CDE04G1581 Ceratophyllum demersum HOM05D000172 ORTHO05D008216 1.6e-49 200.3 145 63.4
AL1G14720 Arabidopsis lyrata HOM05D000172 ORTHO05D008216 1.3e-48 197.2 177 63.3
HanXRQChr04g0126831 Helianthus annuus HOM05D000172 ORTHO05D008216 1.7e-48 196.8 193 49.2
Carub.0001s0423 Capsella rubella HOM05D000172 ORTHO05D008216 5.1e-48 195.3 177 62.1
Sp1g03860 Schrenkiella parvula HOM05D000172 ORTHO05D008216 8.6e-48 194.5 177 62.1
EL10Ac9g22821 Beta vulgaris HOM05D000172 ORTHO05D008216 1.5e-47 193.7 221 49.3
Thhalv10008833m.g Eutrema salsugineum HOM05D000172 ORTHO05D008216 7.3e-47 191.4 191 53.9
Solyc07g049470.4 Solanum lycopersicum HOM05D000172 ORTHO05D008216 9.5e-47 191.0 157 60.5
BcaB03g13463 Brassica carinata HOM05D000172 ORTHO05D008216 1.2e-46 190.7 197 53.8
SalBow1G7277 Salvia bowleyana HOM05D000172 ORTHO05D008216 2.1e-46 189.9 201 51.2
arahy.Tifrunner.gnm1.ann1.YBUA9J Arachis hypogaea HOM05D000172 ORTHO05D008216 8.1e-46 188.0 97 94.8
CARHR004400 Cardamine hirsuta HOM05D000172 ORTHO05D008216 1.4e-45 187.2 190 57.4
BcaC07g36869 Brassica carinata HOM05D001534 ORTHO05D003503 1.8e-45 186.8 191 53.9
A08p36620 Brassica napus HOM05D001534 ORTHO05D003503 6.8e-45 184.9 184 55.4
BraA08t35564Z Brassica rapa HOM05D001534 ORTHO05D003503 6.8e-45 184.9 178 57.3
Os04g0669100 Oryza sativa ssp. japonica HOM05D000172 ORTHO05D008216 8.9e-45 184.5 142 61.3
PSO832G3827 Papaver somniferum HOM05D000172 ORTHO05D008216 8.9e-45 184.5 195 50.3
C08p01620 Brassica napus HOM05D001534 ORTHO05D003503 1.2e-44 184.1 155 58.1
BolC8t46965H Brassica oleracea HOM05D001534 ORTHO05D003503 1.2e-44 184.1 155 58.1
Migut.H01248 Erythranthe guttata HOM05D000172 ORTHO05D008216 2.6e-44 183.0 196 52.6
HPP92_000210 Vanilla planifolia HOM05D000172 ORTHO05D008216 2.6e-44 183.0 164 56.7
Cc05_g02620 Coffea canephora HOM05D000172 ORTHO05D008216 3.4e-44 182.6 158 58.9
Lsat_1_v5_gn_7_94941 Lactuca sativa HOM05D000172 ORTHO05D008216 5.8e-44 181.8 154 55.8
HPP92_000219 Vanilla planifolia HOM05D000172 ORTHO05D008216 9.9e-44 181.0 164 56.1
PSO210G7646 Papaver somniferum HOM05D000172 ORTHO05D008216 1.7e-43 180.3 195 49.7
arahy.Tifrunner.gnm1.ann1.Z24BKS Arachis hypogaea HOM05D000172 ORTHO05D008216 2.2e-43 179.9 102 89.2
arahy.Tifrunner.gnm1.ann1.2252MW Arachis hypogaea HOM05D000172 ORTHO05D008216 2.9e-43 179.5 101 90.1
Zm00001eb066900 Zea mays HOM05D000172 ORTHO05D008216 6.4e-43 178.3 152 58.6
SEGI_13182 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 1.1e-42 177.6 174 55.2
Zm00001eb433230 Zea mays HOM05D000172 ORTHO05D008216 1.9e-42 176.8 196 48.5
unitig_578.g16772 Utricularia gibba HOM05D000172 ORTHO05D008216 2.1e-41 173.3 186 51.1
Glyma.14G050300 Glycine max HOM05D000172 ORTHO05D008216 3.3e-39 166.0 131 61.1
arahy.Tifrunner.gnm1.ann1.YE9ADV Arachis hypogaea HOM05D000172 ORTHO05D008216 7.3e-39 164.9 94 90.4
QL08p030202 Quercus lobata HOM05D000172 ORTHO05D008216 2.8e-38 162.9 124 65.3
ECA236G1458 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-37 160.2 191 42.4
QL93p0185_0050 Quercus lobata HOM05D000172 ORTHO05D008216 5.2e-37 158.7 124 64.5
Dinv39759 Davidia involucrata HOM05D000172 ORTHO05D008216 2.6e-36 156.4 123 63.4
ATR1128G110 Amborella trichopoda HOM05D000172 ORTHO05D008216 2.4e-34 149.8 122 62.3
arahy.Tifrunner.gnm1.ann1.R9GX0H Arachis hypogaea HOM05D000172 ORTHO05D008216 4.2e-34 149.1 83 90.4
SalBow1G5012 Salvia bowleyana HOM05D000172 ORTHO05D008216 4.2e-34 149.1 193 44.6
arahy.Tifrunner.gnm1.ann1.J9YZDG Arachis hypogaea HOM05D000172 ORTHO05D008216 1.0e-32 144.4 87 85.1
Aa31LG1G19790 Aethionema arabicum HOM05D000172 ORTHO05D008216 1.7e-32 143.7 202 47.0
CiPaw.03G154000 Carya illinoinensis HOM05D000172 ORTHO05D008216 5.1e-32 142.1 157 51.6
vmacro12154 Vaccinium macrocarpon HOM05D000172 ORTHO05D008216 1.1e-31 141.0 121 59.5
AUR62015120 Chenopodium quinoa HOM05D000172 ORTHO05D008216 5.6e-31 138.7 122 59.0
Pp3c2_22540 Physcomitrium patens HOM05D000172 ORTHO05D008216 3.1e-29 132.9 131 48.9
AT1G04985 Arabidopsis thaliana HOM05D000172 ORTHO05D008216 2.9e-27 126.3 114 60.5
DCAR_019254 Daucus carota HOM05D000172 ORTHO05D008216 1.1e-26 124.4 106 51.9
Haze_12755 Corylus avellana HOM05D000172 ORTHO05D008216 2.4e-26 123.2 161 47.8
arahy.Tifrunner.gnm1.ann1.7XK0ZA Arachis hypogaea HOM05D000172 ORTHO05D008216 1.8e-24 117.1 68 82.4
arahy.Tifrunner.gnm1.ann1.J7SF2C Arachis hypogaea HOM05D000172 ORTHO05D008216 3.0e-24 116.3 63 88.9
arahy.Tifrunner.gnm1.ann1.971VLJ Arachis hypogaea HOM05D000172 ORTHO05D008216 5.1e-24 115.5 68 80.9
arahy.Tifrunner.gnm1.ann1.UD09X1 Arachis hypogaea HOM05D000172 ORTHO05D008216 5.1e-24 115.5 97 66.0
AagrBONN_evm.TU.Sc2ySwM_228.5805 Anthoceros agrestis HOM05D000172 ORTHO05D008216 2.5e-23 113.2 109 50.5
DCAR_021132 Daucus carota HOM05D000172 ORTHO05D008216 7.4e-23 111.7 111 52.3
Aqoxy1G04172 Aquilegia oxysepala HOM05D000172 ORTHO05D008216 9.6e-23 111.3 111 50.5
CDE07G1564 Ceratophyllum demersum HOM05D000172 ORTHO05D008216 9.6e-23 111.3 116 49.1
arahy.Tifrunner.gnm1.ann1.XV84RB Arachis hypogaea HOM05D000172 ORTHO05D008216 2.8e-22 109.8 63 84.1
DCAR_021133 Daucus carota HOM05D000172 ORTHO05D008216 6.2e-22 108.6 87 62.1
CBR_g23765 Chara braunii HOM05D000172 ORTHO05D008216 3.1e-21 106.3 109 50.5
SMO111G0036 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 2.4e-18 96.7 117 42.7
SMO358G0556 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 2.4e-18 96.7 117 42.7
SEGI_22849 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 1.3e-11 74.3 63 61.9
vmacro12152 Vaccinium macrocarpon HOM05D000172 ORTHO05D008216 1.7e-11 73.9 73 49.3
Oeu003064.1 Olea europaea HOM05D000172 ORTHO05D008216 8.4e-11 71.6 68 55.9
DCAR_021134 Daucus carota HOM05D000172 ORTHO05D008216 5.1e-08 62.4 56 57.1
SHI10091 Sapria himalayana HOM05D000172 ORTHO05D008216 9.6e-07 58.2 73 41.1


User provided reference genes

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