Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 2.8e-163 578.6 293 100.0
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 4.5e-161 571.2 293 98.6
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 3.5e-121 438.7 262 84.7
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 3.5e-121 438.7 266 85.3
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 4.5e-121 438.3 294 76.2
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 1.4e-119 433.3 250 84.8
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 3.2e-119 432.2 307 73.3
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 2.1e-118 429.5 267 80.1
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 1.0e-117 427.2 251 83.3
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 1.8e-117 426.4 292 74.7
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 8.8e-117 424.1 287 77.0
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 1.3e-115 420.2 254 81.1
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 1.7e-115 419.9 254 81.1
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 2.8e-115 419.1 250 82.4
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 8.2e-115 417.5 292 73.6
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 1.1e-114 417.2 292 74.0
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 1.4e-114 416.8 268 77.2
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 3.1e-114 415.6 280 74.6
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 1.2e-113 413.7 262 79.4
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 5.9e-113 411.4 253 81.0
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 1.0e-112 410.6 263 77.9
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 1.7e-112 409.8 252 80.6
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 2.2e-112 409.5 264 76.5
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 2.9e-112 409.1 296 72.0
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 3.8e-112 408.7 262 75.6
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 5.0e-112 408.3 275 76.0
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 8.5e-112 407.5 272 76.1
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 1.5e-111 406.8 270 77.8
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 1.9e-111 406.4 285 70.9
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 1.9e-111 406.4 253 79.8
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 2.5e-111 406.0 263 77.6
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 3.2e-111 405.6 264 75.8
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 3.2e-111 405.6 265 77.4
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 4.2e-111 405.2 302 70.5
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 5.5e-111 404.8 250 78.0
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 7.2e-111 404.4 265 74.0
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 1.2e-110 403.7 267 77.2
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 1.2e-110 403.7 267 77.2
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 1.2e-110 403.7 267 77.2
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 1.6e-110 403.3 273 73.3
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 6.1e-110 401.4 269 76.6
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 6.1e-110 401.4 269 76.6
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 5.2e-109 398.3 256 77.0
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 5.2e-109 398.3 301 69.8
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 5.2e-109 398.3 247 78.9
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 6.7e-109 397.9 271 72.3
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 8.8e-109 397.5 291 69.8
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 8.8e-109 397.5 271 72.7
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 2.6e-108 396.0 284 70.1
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 3.3e-108 395.6 267 74.5
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 7.5e-108 394.4 290 69.7
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 2.2e-107 392.9 261 74.7
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 3.7e-107 392.1 247 79.8
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 6.3e-107 391.3 244 79.9
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 8.3e-107 391.0 247 79.4
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 8.3e-107 391.0 267 73.0
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 1.1e-106 390.6 267 73.0
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 5.3e-106 388.3 285 69.5
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 5.3e-106 388.3 282 69.1
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 1.6e-105 386.7 263 71.9
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 7.7e-105 384.4 265 72.8
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 1.7e-104 383.3 264 70.8
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 8.5e-104 380.9 293 66.2
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 8.0e-102 374.4 254 75.2
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 1.0e-101 374.0 228 80.7
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 8.8e-101 370.9 260 70.8
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 5.7e-100 368.2 222 80.6
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 6.3e-99 364.8 222 81.1
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 8.3e-99 364.4 261 72.4
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 1.8e-98 363.2 214 83.2
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.6e-97 360.1 265 71.7
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 1.0e-96 357.5 220 80.5
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 2.6e-92 342.8 267 67.4
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 7.5e-92 341.3 202 81.2
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 3.1e-90 335.9 244 68.4
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 4.5e-89 332.0 224 74.1
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 4.5e-89 332.0 204 77.5
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 8.6e-88 327.8 340 51.5
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 6.8e-85 318.2 205 77.1
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 5.4e-82 308.5 204 72.5
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 1.2e-81 307.4 266 57.5
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 3.9e-80 302.4 261 60.2
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 5.0e-80 302.0 196 75.5
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 6.6e-80 301.6 277 59.9
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 4.7e-78 295.4 249 58.6
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 5.2e-77 292.0 254 55.5
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 5.8e-76 288.5 233 64.4
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 6.4e-75 285.0 210 70.5
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 2.7e-73 279.6 292 54.5
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 6.0e-73 278.5 167 80.2
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 2.8e-70 269.6 174 75.9
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.7e-67 260.4 247 53.0
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 1.9e-66 256.9 189 70.4
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 2.4e-66 256.5 201 62.2
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 1.3e-64 250.8 223 57.0
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 2.8e-62 243.0 203 64.5
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 6.2e-62 241.9 275 48.4
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 1.8e-61 240.4 181 64.6
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 7.6e-52 208.4 168 66.1
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 1.9e-50 203.8 128 78.1
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 1.1e-42 177.9 245 42.9
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 1.5e-39 167.5 93 89.2
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 2.9e-35 153.3 92 81.5
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 7.6e-28 128.6 104 60.6
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.1e-23 114.8 98 51.0
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 7.4e-23 112.1 125 46.4
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 3.7e-22 109.8 144 43.8
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 6.9e-21 105.5 57 86.0
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 1.5e-20 104.4 85 62.4
Oeu016657.1 Olea europaea HOM05D006925 ORTHO05D008830 1.9e-18 97.4 62 80.6
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 6.7e-16 89.0 98 44.9
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 1.3e-14 84.7 215 30.2
EL10Ac6g13953 Beta vulgaris HOM05D006925 ORTHO05D008830 1.5e-12 77.8 52 75.0
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 1.3e-11 74.7 41 78.0
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 1.4e-10 71.2 47 70.2
MCO01G431 Micromonas commoda HOM05D006925 ORTHO05D008830 1.6e-09 67.8 238 26.9
Ciclev10003790m.g Citrus clementina HOM05D006925 ORTHO05D008830 5.7e-07 59.3 37 83.8
vmacro01629 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 2.8e-06 57.0 46 58.7


User provided reference genes

Program Settings