Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.EC2A8B Arachis hypogaea HOM05D002412 ORTHO05D002516 7.0e-63 244.2 164 100.0
arahy.Tifrunner.gnm1.ann1.1Z4Y0D Arachis hypogaea HOM05D002412 ORTHO05D002516 4.5e-62 241.5 164 99.4
Psat4g227320 Pisum sativum HOM05D002412 ORTHO05D002516 8.1e-19 97.8 159 42.8
Glyma.11G002100 Glycine max HOM05D002412 ORTHO05D002516 9.9e-17 90.9 161 40.4
Glyma.01G242100 Glycine max HOM05D002412 ORTHO05D002516 4.9e-16 88.6 161 40.4
VMungo1215G2231 Vigna mungo HOM05D002412 ORTHO05D002516 1.9e-15 86.7 166 40.4
Lj1g0009349 Lotus japonicus HOM05D002412 ORTHO05D002516 1.3e-13 80.5 177 37.9
Phvul.002G051300 Phaseolus vulgaris HOM05D002412 ORTHO05D002516 3.0e-13 79.3 166 38.6
TPR.G8322 Trifolium pratense HOM05D002412 ORTHO05D002516 6.6e-13 78.2 159 37.7
Glyma.10G256100 Glycine max HOM05D002412 ORTHO05D002516 4.3e-12 75.5 172 39.0
GSVIVG01037808001 Vitis vinifera HOM05D002412 ORTHO05D002516 1.6e-11 73.6 165 37.0
Ciclev10029343m.g Citrus clementina HOM05D002412 ORTHO05D002516 2.1e-11 73.2 165 36.4
Glyma.20G135500 Glycine max HOM05D002412 ORTHO05D002516 8.1e-11 71.2 174 37.9
Phvul.007G046700 Phaseolus vulgaris HOM05D002412 ORTHO05D002516 6.9e-10 68.2 165 38.2
VMungo0720G0862 Vigna mungo HOM05D002412 ORTHO05D002516 6.9e-10 68.2 170 37.6
Actinidia04390 Actinidia chinensis HOM05D002412 ORTHO05D002516 3.4e-09 65.9 150 35.3
Lalb_Chr21g0308011 Lupinus albus HOM05D002412 ORTHO05D002516 4.4e-09 65.5 166 36.1
Duzib052G0953 Durio zibethinus HOM05D002412 ORTHO05D002516 7.6e-09 64.7 176 35.2
Lj5g0012685 Lotus japonicus HOM05D002412 ORTHO05D002516 9.9e-09 64.3 166 36.7
Cfa004671 Carpinus fangiana HOM05D002412 ORTHO05D002516 1.7e-08 63.5 165 33.3
Aqoxy6G02560 Aquilegia oxysepala HOM05D002412 ORTHO05D002516 2.9e-08 62.8 182 31.9
QL11p029982 Quercus lobata HOM05D002412 ORTHO05D002516 2.9e-08 62.8 176 34.7
RhsimUnG0041400 Rhododendron simsii HOM05D002412 ORTHO05D002516 2.9e-08 62.8 162 33.3
RhsimUnG0123400 Rhododendron simsii HOM05D002412 ORTHO05D002516 2.9e-08 62.8 162 33.3
Gohir.A12G019300 Gossypium hirsutum HOM05D002412 ORTHO05D002516 3.8e-08 62.4 165 34.5
Gohir.D12G019500 Gossypium hirsutum HOM05D002412 ORTHO05D002516 3.8e-08 62.4 165 34.5
Gorai.008G019800 Gossypium raimondii HOM05D002412 ORTHO05D002516 3.8e-08 62.4 165 34.5
Medtr1g106080 Medicago truncatula HOM05D002412 ORTHO05D002516 3.8e-08 62.4 186 34.4
TAR381G0181 Trochodendron aralioides HOM05D002412 ORTHO05D002516 1.1e-07 60.8 177 36.2
HanXRQChr03g0065031 Helianthus annuus HOM05D002412 ORTHO05D002516 1.4e-07 60.5 151 32.5
Hma1.2p1_1059F.1_g253110 Hydrangea macrophylla HOM05D002412 ORTHO05D002516 1.4e-07 60.5 179 32.4
Dinv15818 Davidia involucrata HOM05D002412 ORTHO05D002516 1.9e-07 60.1 153 34.0
Potri.009G086600 Populus trichocarpa HOM05D002412 ORTHO05D002516 1.9e-07 60.1 188 30.9
Thecc.02G118800 Theobroma cacao HOM05D002412 ORTHO05D002516 1.9e-07 60.1 167 34.1
Actinidia00360 Actinidia chinensis HOM05D002412 ORTHO05D002516 4.2e-07 58.9 168 33.3
Nn6g34504 Nelumbo nucifera HOM05D002412 ORTHO05D002516 4.2e-07 58.9 166 30.7
Sopen01g049190 Solanum pennellii HOM05D002412 ORTHO05D002516 4.2e-07 58.9 150 32.0
Prupe.8G147000 Prunus persica HOM05D002412 ORTHO05D002516 5.4e-07 58.5 191 29.8
Nitab4.5_0001458g0070 Nicotiana tabacum HOM05D002412 ORTHO05D002516 7.1e-07 58.2 158 32.9
MD08G1080400 Malus domestica HOM05D002412 ORTHO05D002516 9.3e-07 57.8 152 32.2
Prupe.1G421400 Prunus persica HOM05D002412 ORTHO05D002516 9.3e-07 57.8 152 36.8
Nn5g30629 Nelumbo nucifera HOM05D002412 ORTHO05D002516 1.2e-06 57.4 171 38.6
TAR628G0919 Trochodendron aralioides HOM05D002412 ORTHO05D002516 1.2e-06 57.4 181 32.6
TWI59G0380 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 1.6e-06 57.0 189 31.2
CiPaw.06G164900 Carya illinoinensis HOM05D002412 ORTHO05D002516 2.1e-06 56.6 182 30.8
vmacro19537 Vaccinium macrocarpon HOM05D002412 ORTHO05D002516 2.7e-06 56.2 179 31.3
Actinidia34355 Actinidia chinensis HOM05D002412 ORTHO05D002516 6.0e-06 55.1 65 53.8
Haze_10271 Corylus avellana HOM05D002412 ORTHO05D002516 6.0e-06 55.1 166 30.1
Ca_11030_v3 Cicer arietinum L. HOM05D002412 ORTHO05D002516 7.8e-06 54.7 174 38.5
Medtr5g005230 Medicago truncatula HOM05D002412 ORTHO05D002516 7.8e-06 54.7 64 53.1
Solyc01g106910.4 Solanum lycopersicum HOM05D002412 ORTHO05D002516 7.8e-06 54.7 154 34.4


User provided reference genes

Program Settings