Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.EBVM73 Arachis hypogaea HOM05D005997 ORTHO05D004267 3.9e-73 278.1 146 100.0
arahy.Tifrunner.gnm1.ann1.D6FGWZ Arachis hypogaea HOM05D005997 ORTHO05D008323 4.6e-34 148.3 228 46.5
arahy.Tifrunner.gnm1.ann1.SE7UXR Arachis hypogaea HOM05D003648 ORTHO05D004267 1.1e-19 100.5 61 86.9
arahy.Tifrunner.gnm1.ann1.AL1Y46 Arachis hypogaea HOM05D003648 ORTHO05D004267 6.1e-18 94.7 62 83.9
arahy.Tifrunner.gnm1.ann1.N1CS9Q Arachis hypogaea HOM05D005997 ORTHO05D008323 6.3e-07 58.2 28 92.9
arahy.Tifrunner.gnm1.ann1.JACZ02 Arachis hypogaea HOM05D005997 ORTHO05D008323 8.2e-07 57.8 27 96.3
Dinv40826 Davidia involucrata HOM05D005997 ORTHO05D008323 8.2e-07 57.8 29 86.2
SGA_v2.0_scaffold168G38522 Striga asiatica HOM05D005997 ORTHO05D008323 1.1e-06 57.4 38 71.1
CiPaw.12G135200 Carya illinoinensis HOM05D005997 ORTHO05D008323 2.4e-06 56.2 29 82.8
DCAR_022603 Daucus carota HOM05D005997 ORTHO05D008323 2.4e-06 56.2 29 79.3
Phvul.006G051400 Phaseolus vulgaris HOM05D005997 ORTHO05D008323 2.4e-06 56.2 28 85.7
Atru.BG.132.p Acer truncatum HOM05D005997 ORTHO05D008323 3.1e-06 55.8 28 85.7
Lj6g0009736 Lotus japonicus HOM05D005997 ORTHO05D008323 3.1e-06 55.8 28 85.7
Lalb_Chr06g0174051 Lupinus albus HOM05D005997 ORTHO05D008323 3.1e-06 55.8 28 85.7
QL08p008622 Quercus lobata HOM05D005997 ORTHO05D008323 3.1e-06 55.8 29 82.8
TPR.G1907 Trifolium pratense HOM05D005997 ORTHO05D008323 3.1e-06 55.8 28 85.7
arahy.Tifrunner.gnm1.ann1.U3B0HF Arachis hypogaea HOM05D003842 ORTHO05D026908 4.1e-06 55.5 27 92.6
Cc05_g14560 Coffea canephora HOM05D005997 ORTHO05D008323 4.1e-06 55.5 29 82.8
Ca_20142_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 5.3e-06 55.1 28 82.1
Ca_20145_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 5.3e-06 55.1 28 82.1
Dinv10299 Davidia involucrata HOM05D005997 ORTHO05D008323 5.3e-06 55.1 29 79.3
FAN25G0611 Fragaria x ananassa HOM05D005997 ORTHO05D008323 5.3e-06 55.1 29 79.3
Glyma.08G325100 Glycine max HOM05D005997 ORTHO05D008323 5.3e-06 55.1 28 82.1
Nn1g03269 Nelumbo nucifera HOM05D005997 ORTHO05D008323 5.3e-06 55.1 29 79.3
TAR624G0829 Trochodendron aralioides HOM05D005997 ORTHO05D008323 5.3e-06 55.1 29 79.3
VMungo0540G2314 Vigna mungo HOM05D005997 ORTHO05D008323 5.3e-06 55.1 28 82.1
unitig_899.g15278 Utricularia gibba HOM05D005997 ORTHO05D008323 7.0e-06 54.7 29 79.3
Haze_09774 Corylus avellana HOM05D005997 ORTHO05D008323 9.1e-06 54.3 29 82.8
Psat5g171680 Pisum sativum HOM05D005997 ORTHO05D008323 9.1e-06 54.3 34 70.6
PGR044G2356 Punica granatum HOM05D005997 ORTHO05D008323 9.1e-06 54.3 29 79.3
RcHm_v2.0_Chr5g0042111 Rosa chinensis HOM05D005997 ORTHO05D008323 9.1e-06 54.3 37 67.6


User provided reference genes

Program Settings